Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167624119

Identifier: 167624119

GI number: 167624119

Start: 2660222

End: 2660467

Strand: Reverse

Name: 167624119

Synonym: Shal_2195

Alternate gene names: NA

Gene position: 2660467-2660222 (Counterclockwise)

Preceding gene: 167624120

Following gene: 167624118

Centisome position: 50.9

GC content: 43.5

Gene sequence:

>246_bases
ATGCGCGCTCCTAACAGACAGTTAAATATCAGGATCCCAGAAGACAAAATCGCGGAGCTTATACAACAAGGGGTACTGTG
TGCTGCCGATTTTAAGTGTTTAGATGCGCAGACGAAGAAAGCTGTATGGCAACTATGTCTGTGGAGCTGTGAAAAACGCA
TTCATTGTAACAAGCAGTGCCAAGAGAAGTGTAAAAGCCAATGCCAAGAGGCTGTTCAAGCTGCAATATTGGTTATAGAA
CAGTAA

Upstream 100 bases:

>100_bases
GCTGGCTGCGTACTAAGATCATATTATCGCTAAATAGATGTTGATAATCATTCTCATTTAGTTATATTAAGTCTCCCCAT
TAGAACAAAGAAGAAGTAAG

Downstream 100 bases:

>100_bases
AACAATACAATAGGGCTAATTAAGGATATCGTTTATTCATCTTATTGATTATAATAAGGATATACGTTTTTATAGCGGTT
TTCCTTATGCAGTTACCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MRAPNRQLNIRIPEDKIAELIQQGVLCAADFKCLDAQTKKAVWQLCLWSCEKRIHCNKQCQEKCKSQCQEAVQAAILVIE
Q

Sequences:

>Translated_81_residues
MRAPNRQLNIRIPEDKIAELIQQGVLCAADFKCLDAQTKKAVWQLCLWSCEKRIHCNKQCQEKCKSQCQEAVQAAILVIE
Q
>Mature_81_residues
MRAPNRQLNIRIPEDKIAELIQQGVLCAADFKCLDAQTKKAVWQLCLWSCEKRIHCNKQCQEKCKSQCQEAVQAAILVIE
Q

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9300; Mature: 9300

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
11.1 %Cys+Met (Translated Protein)
9.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
11.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPNRQLNIRIPEDKIAELIQQGVLCAADFKCLDAQTKKAVWQLCLWSCEKRIHCNKQC
CCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QEKCKSQCQEAVQAAILVIEQ
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRAPNRQLNIRIPEDKIAELIQQGVLCAADFKCLDAQTKKAVWQLCLWSCEKRIHCNKQC
CCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QEKCKSQCQEAVQAAILVIEQ
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA