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The map label for this gene is 167624118

Identifier: 167624118

GI number: 167624118

Start: 2658843

End: 2660135

Strand: Reverse

Name: 167624118

Synonym: Shal_2194

Alternate gene names: NA

Gene position: 2660135-2658843 (Counterclockwise)

Preceding gene: 167624119

Following gene: 167624117

Centisome position: 50.89

GC content: 47.41

Gene sequence:

>1293_bases
ATGCAGTTACCCCCAGTTATTCCTCTTTTTGACTCAATCGACTATATCCAAACTGGCAACCCTCTTGTTAACCAACATAT
CACCCAGCTGAGTTTGGGGGTTCTCGATGAGACGGGCTTGGTCTTTGAACACGCCACCGACTGGCTATTCGAGCAAAAAT
ACAATGAGAATAATTATAAAGCCTACCGAAGTGAGTTAACCACATTCCTGCACTGGTGTTTCGATGTGATTAAGCTCAAC
GTTAGTGCCATAGGGCGCAGAGAGGTTGGCCTATATATAGAGTACTGTAAGAATCCGCCAATCGAACTTATTGGCTATTT
TAACGTGGCCCAATTTAAGTGTGACAAAGCTAGCGATGAACGTACGCCCAATCCGAACTGGCTTCCTTTTAGAGGCAAAA
AAATTGACGGAAAAGCTCAGCCTTATGCCCTTAGTGATAGTGCACTCAAGACTAAGGTCGCAATTCTTTCTAGCTTCTAT
AGTTATTTGATGGGGGAGGATTTCTGCGAGAAAAATCCGGCGCAGATGTGGCTCAATAAGAGTCGTTTTTCCTCAAGACA
GAAGTACCGTCTCAACACCGATGACGATAATCAATTGGCGTTCACCGAGTTGCAGTGGTCCTACATTATGTCCACGGTAG
AGAAGTTAGCCAAATCACTGCCTGAATTACATCAGCGAAGTCTGTTTCTGATTAAACTGATCTACTCCTGCTATCTTAGA
GTCTCCGAAGTATCGGCTAGGGCGGGGTACTCGCCAGTGATGAGCCAGTTTAAGCAAAACCGCCAGACCGGGATCTGGAG
CTTTTATATCCCCAAGAGTAAAGGGGGCAAGAGCAGAAGTGTGGCCGTATCCAAGGCGTTACTCGATGCACTGAGCCAAT
ATCGTAGCTACTTAAAGCTGTCGCCATTACCGACTGGCAGCGAACAGCATCCATTAATCGTGCGCCAAAAAGCGGCGGGA
CGAGGGCGGGAAGTCGGCTGCTTGAATGCCAACCTAGGGATCCGTCAAATTCGAGAAGAAGTCGATAAGATCATCGAAAT
CGCGGCGAATAGCATCGAAACAGACGGCTTTATTGAGGATGCACAGCAGATGCGAGGCTTAAGTATCCACAATATTCGCC
ACACAGGCATTACCCACGACATCAATATTAACGGCCGGCCATTGTCACACGTACAAGCCGATGCCGGTCATGAGAGTATC
GACACCACCTCGCAATATCTGCACACCACCCAGATCGAACGTCATGAGAGTGCGCAGAATAAACCGTTAGATTACTTGCA
GGGGATTGAGTAG

Upstream 100 bases:

>100_bases
TTATAGAACAGTAAAACAATACAATAGGGCTAATTAAGGATATCGTTTATTCATCTTATTGATTATAATAAGGATATACG
TTTTTATAGCGGTTTTCCTT

Downstream 100 bases:

>100_bases
CTGTTTAATAAAATTGAATAAGAACTGAGTAGCTACTAAACACAAATCAACGTAGATACTTAGTCAGTAAAGTACCTTTC
CAAGAGAAAGTGCTTCAGTA

Product: integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase Phage Integrase Family; Integrase/Recombinase Protein; Phage Integrase Family Site Specific Recombinase; Site Specific Recombinase Phage Integrase Family; Integrase/Recombinase; Integrase; Integrase / Recombinase Protein; Site-Specific Recombinase Phage Integrase Family Protein; Site-Specific Recombinase; Site-Specific Tyrosine Integrase/Recombinase; Site-Specific Recombinase XerC; Phage Integrase Family; Phage IntegrasePhage Integrase N-Terminal SAM-Like

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MQLPPVIPLFDSIDYIQTGNPLVNQHITQLSLGVLDETGLVFEHATDWLFEQKYNENNYKAYRSELTTFLHWCFDVIKLN
VSAIGRREVGLYIEYCKNPPIELIGYFNVAQFKCDKASDERTPNPNWLPFRGKKIDGKAQPYALSDSALKTKVAILSSFY
SYLMGEDFCEKNPAQMWLNKSRFSSRQKYRLNTDDDNQLAFTELQWSYIMSTVEKLAKSLPELHQRSLFLIKLIYSCYLR
VSEVSARAGYSPVMSQFKQNRQTGIWSFYIPKSKGGKSRSVAVSKALLDALSQYRSYLKLSPLPTGSEQHPLIVRQKAAG
RGREVGCLNANLGIRQIREEVDKIIEIAANSIETDGFIEDAQQMRGLSIHNIRHTGITHDININGRPLSHVQADAGHESI
DTTSQYLHTTQIERHESAQNKPLDYLQGIE

Sequences:

>Translated_430_residues
MQLPPVIPLFDSIDYIQTGNPLVNQHITQLSLGVLDETGLVFEHATDWLFEQKYNENNYKAYRSELTTFLHWCFDVIKLN
VSAIGRREVGLYIEYCKNPPIELIGYFNVAQFKCDKASDERTPNPNWLPFRGKKIDGKAQPYALSDSALKTKVAILSSFY
SYLMGEDFCEKNPAQMWLNKSRFSSRQKYRLNTDDDNQLAFTELQWSYIMSTVEKLAKSLPELHQRSLFLIKLIYSCYLR
VSEVSARAGYSPVMSQFKQNRQTGIWSFYIPKSKGGKSRSVAVSKALLDALSQYRSYLKLSPLPTGSEQHPLIVRQKAAG
RGREVGCLNANLGIRQIREEVDKIIEIAANSIETDGFIEDAQQMRGLSIHNIRHTGITHDININGRPLSHVQADAGHESI
DTTSQYLHTTQIERHESAQNKPLDYLQGIE
>Mature_430_residues
MQLPPVIPLFDSIDYIQTGNPLVNQHITQLSLGVLDETGLVFEHATDWLFEQKYNENNYKAYRSELTTFLHWCFDVIKLN
VSAIGRREVGLYIEYCKNPPIELIGYFNVAQFKCDKASDERTPNPNWLPFRGKKIDGKAQPYALSDSALKTKVAILSSFY
SYLMGEDFCEKNPAQMWLNKSRFSSRQKYRLNTDDDNQLAFTELQWSYIMSTVEKLAKSLPELHQRSLFLIKLIYSCYLR
VSEVSARAGYSPVMSQFKQNRQTGIWSFYIPKSKGGKSRSVAVSKALLDALSQYRSYLKLSPLPTGSEQHPLIVRQKAAG
RGREVGCLNANLGIRQIREEVDKIIEIAANSIETDGFIEDAQQMRGLSIHNIRHTGITHDININGRPLSHVQADAGHESI
DTTSQYLHTTQIERHESAQNKPLDYLQGIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49023; Mature: 49023

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPPVIPLFDSIDYIQTGNPLVNQHITQLSLGVLDETGLVFEHATDWLFEQKYNENNYK
CCCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHH
AYRSELTTFLHWCFDVIKLNVSAIGRREVGLYIEYCKNPPIELIGYFNVAQFKCDKASDE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCEEEEEECCHHEEECCCCCCC
RTPNPNWLPFRGKKIDGKAQPYALSDSALKTKVAILSSFYSYLMGEDFCEKNPAQMWLNK
CCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHH
SRFSSRQKYRLNTDDDNQLAFTELQWSYIMSTVEKLAKSLPELHQRSLFLIKLIYSCYLR
HHHCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSEVSARAGYSPVMSQFKQNRQTGIWSFYIPKSKGGKSRSVAVSKALLDALSQYRSYLKL
HHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
SPLPTGSEQHPLIVRQKAAGRGREVGCLNANLGIRQIREEVDKIIEIAANSIETDGFIED
CCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
AQQMRGLSIHNIRHTGITHDININGRPLSHVQADAGHESIDTTSQYLHTTQIERHESAQN
HHHHCCCCEECEEECCCEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
KPLDYLQGIE
CCHHHHCCCC
>Mature Secondary Structure
MQLPPVIPLFDSIDYIQTGNPLVNQHITQLSLGVLDETGLVFEHATDWLFEQKYNENNYK
CCCCCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHH
AYRSELTTFLHWCFDVIKLNVSAIGRREVGLYIEYCKNPPIELIGYFNVAQFKCDKASDE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHCEEEEECCCCCEEEEEECCHHEEECCCCCCC
RTPNPNWLPFRGKKIDGKAQPYALSDSALKTKVAILSSFYSYLMGEDFCEKNPAQMWLNK
CCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHH
SRFSSRQKYRLNTDDDNQLAFTELQWSYIMSTVEKLAKSLPELHQRSLFLIKLIYSCYLR
HHHCCCCCEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSEVSARAGYSPVMSQFKQNRQTGIWSFYIPKSKGGKSRSVAVSKALLDALSQYRSYLKL
HHHHHHHCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEE
SPLPTGSEQHPLIVRQKAAGRGREVGCLNANLGIRQIREEVDKIIEIAANSIETDGFIED
CCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
AQQMRGLSIHNIRHTGITHDININGRPLSHVQADAGHESIDTTSQYLHTTQIERHESAQN
HHHHCCCCEECEEECCCEEEECCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
KPLDYLQGIE
CCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA