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The map label for this gene is 167624100

Identifier: 167624100

GI number: 167624100

Start: 2629510

End: 2631786

Strand: Direct

Name: 167624100

Synonym: Shal_2176

Alternate gene names: NA

Gene position: 2629510-2631786 (Clockwise)

Preceding gene: 167624099

Following gene: 167624101

Centisome position: 50.31

GC content: 37.37

Gene sequence:

>2277_bases
ATGTTAGATATTAAAAGCATTAAGGCAGATGCTCGCCCGCAAGCTAGTGTTGGCGAATTAATAGAAATACTTCATAAAGA
TGGCCCAGTGGATCGTGAAGTCATACAGGCGTTAACCTATTACAAACTGTTTCATTCTGAAGTTTTTAAACGCTTTGAAT
CTAAGGTGTTGTCAGTTCTTGGATTGTTTTATAAAGATGAGAATCCAACGGACTTATATTCTTTTTTATTGGCAGGAATT
GGAAGAGAAAACAAAAAAAGATTTGGTGAATGGCTTACACCAGTCCAAGCGAGTGTGCGATTAGCGGTAGAAGAAAATCG
ATACACCTCAATATCAGCGCCAACCAGTGCAGGTAAATCTTTTTCTCTAAGGGATTATATTTTTGAGCAAGAAGAAGATA
GCGTAATAGTTGTTCCATCTCGAGCACTTATTGCTGAGTATATGGCGACCTTGAGGGAGCGTTTCAAGGACAATAAGCAG
GTTATGATCTCTTCCTTTGTTGATTGTGTGTTTACAAGCAGAAAGTTGAGACGAATTTTCGTTCTTACCCCTGAGCGCGC
TAGAGAAATTTTTTCACATAAAGACAAATTGAATATATCGTTATTCTTTTTTGATGAGGCTCAAGTATCAGAAGAAGCAG
AAAGAGGGGTTATTTTTGATGTTTTAGTGAGGCGAGTTAAGAGGGCCTACCCAGAAGCAAAACTAGTCTTTGCACATCCT
TTTGTAGATAACCCTGACGCCCAAATGAAGAAGCACGCGTTAGACGAGAGTCAGGCATATTCTCGGTCATACCCTCATAA
TACTGTTGGTAAAGCATTTGTATTTGGTCACAGTAACAAGAAAGACTACTATTTCTCACCGTATAAAGAGCAAGGTCATC
ATGTAAAGAATAGTATCCAACTGAATGGAAAATTCGAGAAAATTGCTTTCAATGGTATTTATACAGTTCTGGTTTTTGTG
TCTAAAGCATCATTATATCGAGGGGACTTTATCGATGATTTTCAGAAGTATGTCGACCGATTTGGCTTAATTGAAGATGA
ATCTGCAATATCTATAATTCAAGAGGTTGAATTGTTGATTGGAGCAAATGAGCAAGACCATCGTTCTAATCTTGTTAGTT
TGCTAAGAAAAGGGGTAGTCATTCATCATGGTTCTGTACCTCTTGAAGTGAGGTTCCTGATTGAAGAATTTATAAGGCAG
GGGCATGCAAAGATTTGCTTTGCTACTAGTACATTAGCCCAAGGTATCAACATGCCTTTCGATGTTGTTTGGTTAGACAA
TATGAGAATGCAGGGTGGTGATGAAGAAGACAAAGCACTAGCATTCAAAAATTTGATAGGACGTAGTGGACGGCTTTCTA
AGGGGGCTGTGTTTGATTTTGGGTATGTATATACAAAGAGCCCTATATTACTTTCATCGCGTTTAAATACACCATTTACT
TTATCTGAAGAGTCACTTCTCGAACAAGATATAGAAGGCTTGGATGATGAAAGAGAGCTTATTTCTTCAATAATCGAAGG
TACATTTGATGAGGAGATGAATCTTCCTTTAACTAAAGTGGATAGGCTCTCAACGAAAGAAGCCCTAGAGCTAATGGAGT
CCGTTTTATATTTTATGTATGAAGATGGATTTGGATCAAAGCTGTTTGGCGGGGATAATAGAGAAAATAGGCTAATTACA
AAACACTGTTTAAAGGCTATTTATGAAATCTCGCTAGGTAGATCTTTGTTTTCTGGAGAGAAGAACGTCTTTGATACTGC
AATCGAAATATTCTTTCATTTGATTCAGGGACGAAGCTTTAAGGAAATTGTAGGAATAAGGTATAGCTATATTTCAAATA
GAGGCAAAAACCAAAACTTGGATGCCAACTTCACTCAGCCTGCGAATAAACTACCAGATAGTGGGTTATTTAATGAATAT
CCACTGTTTAAAAATACAAAATCTAAGGACGTGAGTTACGATGCCGTCGTATTTGATACCTACGATTATTTGGACACGGT
AATCTCATTTTCTTTATCAGACGTGCTTATCGGAGCTTTTAGTATTTATCATAATCATACTAAAGATACCAAGGCTTTAA
AGATGGTAGAGCTATTAAAGTATGGCACTAACGATACTGTTCATACATTGTTGCTACGGTATGGATTTCCTCCAGAAGAG
GTTAAAGAAATATCAATGTACGTAGAATCTATCTCTGAAGAAAATATCTTGTTTAAGCCAGATGTTATTGGCTCCCCAGA
TAATGTGAGGGAGCTCGTAGACTGGTATCTACCATAA

Upstream 100 bases:

>100_bases
CAAAAGATCACGATTCAATAATGGATAATGCAATAGAAAGCATTCAGGAGTCTGGACTGTTTGAAAAAGTTCAATGTGCT
TACGTTATCGGAGTTGTTGT

Downstream 100 bases:

>100_bases
GGCTGTAGGTGGAATCAACAGACAACGTGGAGCTGCTGACCATTTCTACATACATTTACTAATCTTATACAGGAGAGCTA
GTCCGTAACGTCTAGCTCAC

Product: helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 758; Mature: 758

Protein sequence:

>758_residues
MLDIKSIKADARPQASVGELIEILHKDGPVDREVIQALTYYKLFHSEVFKRFESKVLSVLGLFYKDENPTDLYSFLLAGI
GRENKKRFGEWLTPVQASVRLAVEENRYTSISAPTSAGKSFSLRDYIFEQEEDSVIVVPSRALIAEYMATLRERFKDNKQ
VMISSFVDCVFTSRKLRRIFVLTPERAREIFSHKDKLNISLFFFDEAQVSEEAERGVIFDVLVRRVKRAYPEAKLVFAHP
FVDNPDAQMKKHALDESQAYSRSYPHNTVGKAFVFGHSNKKDYYFSPYKEQGHHVKNSIQLNGKFEKIAFNGIYTVLVFV
SKASLYRGDFIDDFQKYVDRFGLIEDESAISIIQEVELLIGANEQDHRSNLVSLLRKGVVIHHGSVPLEVRFLIEEFIRQ
GHAKICFATSTLAQGINMPFDVVWLDNMRMQGGDEEDKALAFKNLIGRSGRLSKGAVFDFGYVYTKSPILLSSRLNTPFT
LSEESLLEQDIEGLDDERELISSIIEGTFDEEMNLPLTKVDRLSTKEALELMESVLYFMYEDGFGSKLFGGDNRENRLIT
KHCLKAIYEISLGRSLFSGEKNVFDTAIEIFFHLIQGRSFKEIVGIRYSYISNRGKNQNLDANFTQPANKLPDSGLFNEY
PLFKNTKSKDVSYDAVVFDTYDYLDTVISFSLSDVLIGAFSIYHNHTKDTKALKMVELLKYGTNDTVHTLLLRYGFPPEE
VKEISMYVESISEENILFKPDVIGSPDNVRELVDWYLP

Sequences:

>Translated_758_residues
MLDIKSIKADARPQASVGELIEILHKDGPVDREVIQALTYYKLFHSEVFKRFESKVLSVLGLFYKDENPTDLYSFLLAGI
GRENKKRFGEWLTPVQASVRLAVEENRYTSISAPTSAGKSFSLRDYIFEQEEDSVIVVPSRALIAEYMATLRERFKDNKQ
VMISSFVDCVFTSRKLRRIFVLTPERAREIFSHKDKLNISLFFFDEAQVSEEAERGVIFDVLVRRVKRAYPEAKLVFAHP
FVDNPDAQMKKHALDESQAYSRSYPHNTVGKAFVFGHSNKKDYYFSPYKEQGHHVKNSIQLNGKFEKIAFNGIYTVLVFV
SKASLYRGDFIDDFQKYVDRFGLIEDESAISIIQEVELLIGANEQDHRSNLVSLLRKGVVIHHGSVPLEVRFLIEEFIRQ
GHAKICFATSTLAQGINMPFDVVWLDNMRMQGGDEEDKALAFKNLIGRSGRLSKGAVFDFGYVYTKSPILLSSRLNTPFT
LSEESLLEQDIEGLDDERELISSIIEGTFDEEMNLPLTKVDRLSTKEALELMESVLYFMYEDGFGSKLFGGDNRENRLIT
KHCLKAIYEISLGRSLFSGEKNVFDTAIEIFFHLIQGRSFKEIVGIRYSYISNRGKNQNLDANFTQPANKLPDSGLFNEY
PLFKNTKSKDVSYDAVVFDTYDYLDTVISFSLSDVLIGAFSIYHNHTKDTKALKMVELLKYGTNDTVHTLLLRYGFPPEE
VKEISMYVESISEENILFKPDVIGSPDNVRELVDWYLP
>Mature_758_residues
MLDIKSIKADARPQASVGELIEILHKDGPVDREVIQALTYYKLFHSEVFKRFESKVLSVLGLFYKDENPTDLYSFLLAGI
GRENKKRFGEWLTPVQASVRLAVEENRYTSISAPTSAGKSFSLRDYIFEQEEDSVIVVPSRALIAEYMATLRERFKDNKQ
VMISSFVDCVFTSRKLRRIFVLTPERAREIFSHKDKLNISLFFFDEAQVSEEAERGVIFDVLVRRVKRAYPEAKLVFAHP
FVDNPDAQMKKHALDESQAYSRSYPHNTVGKAFVFGHSNKKDYYFSPYKEQGHHVKNSIQLNGKFEKIAFNGIYTVLVFV
SKASLYRGDFIDDFQKYVDRFGLIEDESAISIIQEVELLIGANEQDHRSNLVSLLRKGVVIHHGSVPLEVRFLIEEFIRQ
GHAKICFATSTLAQGINMPFDVVWLDNMRMQGGDEEDKALAFKNLIGRSGRLSKGAVFDFGYVYTKSPILLSSRLNTPFT
LSEESLLEQDIEGLDDERELISSIIEGTFDEEMNLPLTKVDRLSTKEALELMESVLYFMYEDGFGSKLFGGDNRENRLIT
KHCLKAIYEISLGRSLFSGEKNVFDTAIEIFFHLIQGRSFKEIVGIRYSYISNRGKNQNLDANFTQPANKLPDSGLFNEY
PLFKNTKSKDVSYDAVVFDTYDYLDTVISFSLSDVLIGAFSIYHNHTKDTKALKMVELLKYGTNDTVHTLLLRYGFPPEE
VKEISMYVESISEENILFKPDVIGSPDNVRELVDWYLP

Specific function: Unknown

COG id: COG1204

COG function: function code R; Superfamily II helicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR022965
- InterPro:   IPR003583
- InterPro:   IPR010994 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: NA

Molecular weight: Translated: 86774; Mature: 86774

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIKSIKADARPQASVGELIEILHKDGPVDREVIQALTYYKLFHSEVFKRFESKVLSVL
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFYKDENPTDLYSFLLAGIGRENKKRFGEWLTPVQASVRLAVEENRYTSISAPTSAGKS
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHEEEEEECCCEEEECCCCCCCCC
FSLRDYIFEQEEDSVIVVPSRALIAEYMATLRERFKDNKQVMISSFVDCVFTSRKLRRIF
CCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEE
VLTPERAREIFSHKDKLNISLFFFDEAQVSEEAERGVIFDVLVRRVKRAYPEAKLVFAHP
EECCHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECC
FVDNPDAQMKKHALDESQAYSRSYPHNTVGKAFVFGHSNKKDYYFSPYKEQGHHVKNSIQ
CCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCEEE
LNGKFEKIAFNGIYTVLVFVSKASLYRGDFIDDFQKYVDRFGLIEDESAISIIQEVELLI
ECCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GANEQDHRSNLVSLLRKGVVIHHGSVPLEVRFLIEEFIRQGHAKICFATSTLAQGINMPF
CCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCE
DVVWLDNMRMQGGDEEDKALAFKNLIGRSGRLSKGAVFDFGYVYTKSPILLSSRLNTPFT
EEEEECCEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCHHEECCCEEEECCCCCCEE
LSEESLLEQDIEGLDDERELISSIIEGTFDEEMNLPLTKVDRLSTKEALELMESVLYFMY
ECHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
EDGFGSKLFGGDNRENRLITKHCLKAIYEISLGRSLFSGEKNVFDTAIEIFFHLIQGRSF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCCH
KEIVGIRYSYISNRGKNQNLDANFTQPANKLPDSGLFNEYPLFKNTKSKDVSYDAVVFDT
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
YDYLDTVISFSLSDVLIGAFSIYHNHTKDTKALKMVELLKYGTNDTVHTLLLRYGFPPEE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHH
VKEISMYVESISEENILFKPDVIGSPDNVRELVDWYLP
HHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLDIKSIKADARPQASVGELIEILHKDGPVDREVIQALTYYKLFHSEVFKRFESKVLSVL
CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFYKDENPTDLYSFLLAGIGRENKKRFGEWLTPVQASVRLAVEENRYTSISAPTSAGKS
HHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHEEEEEECCCEEEECCCCCCCCC
FSLRDYIFEQEEDSVIVVPSRALIAEYMATLRERFKDNKQVMISSFVDCVFTSRKLRRIF
CCHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCEEE
VLTPERAREIFSHKDKLNISLFFFDEAQVSEEAERGVIFDVLVRRVKRAYPEAKLVFAHP
EECCHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECC
FVDNPDAQMKKHALDESQAYSRSYPHNTVGKAFVFGHSNKKDYYFSPYKEQGHHVKNSIQ
CCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCCEEE
LNGKFEKIAFNGIYTVLVFVSKASLYRGDFIDDFQKYVDRFGLIEDESAISIIQEVELLI
ECCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
GANEQDHRSNLVSLLRKGVVIHHGSVPLEVRFLIEEFIRQGHAKICFATSTLAQGINMPF
CCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHCCCCCE
DVVWLDNMRMQGGDEEDKALAFKNLIGRSGRLSKGAVFDFGYVYTKSPILLSSRLNTPFT
EEEEECCEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCHHEECCCEEEECCCCCCEE
LSEESLLEQDIEGLDDERELISSIIEGTFDEEMNLPLTKVDRLSTKEALELMESVLYFMY
ECHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHH
EDGFGSKLFGGDNRENRLITKHCLKAIYEISLGRSLFSGEKNVFDTAIEIFFHLIQGRSF
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCCH
KEIVGIRYSYISNRGKNQNLDANFTQPANKLPDSGLFNEYPLFKNTKSKDVSYDAVVFDT
HHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
YDYLDTVISFSLSDVLIGAFSIYHNHTKDTKALKMVELLKYGTNDTVHTLLLRYGFPPEE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHH
VKEISMYVESISEENILFKPDVIGSPDNVRELVDWYLP
HHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]