Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is smtA [H]

Identifier: 167624082

GI number: 167624082

Start: 2606163

End: 2607026

Strand: Reverse

Name: smtA [H]

Synonym: Shal_2158

Alternate gene names: 167624082

Gene position: 2607026-2606163 (Counterclockwise)

Preceding gene: 167624084

Following gene: 167624079

Centisome position: 49.88

GC content: 42.94

Gene sequence:

>864_bases
ATGGCTTGCTGTGAGAGAATTCGCGCCCGCGTAATTTCGCCAACAGATAACGTTCAACGTATGAAGACGACAGTGAAACA
AGATAGAAACTTTGATGGTTTAGCCCATAAGTTTGCCGCCAGCATTTACGGCACTGCAAAAGGCGAAATAAGGCAAACGG
TTGTTTGGCAAGATATTGAACAGATCTTGTTGGCGCTATCGAAACAACCTAGCAATGCGGCCGCAGAGCTTAGCGTACTT
GACGCAGGCGGCGGCCTAGCCCAGCTGTCACAAAAAATTGCTGCACTTGGGCATAATGTCAGCCTGTGCGATCTATCAAG
TGAGATGTTATCTCTAGCTAAACAAGATATTAGTGATAATCAGCTGCTAAAGAAGTATCAGTTTATCCATAGCCCAGTAC
AGAACATTGCCGAACACCTGCAAGTACCTGTTGATTTAATTCTGTTTCATGCTGTGATGGAGTGGCTAGCAGAACCGATT
CAAGCCTTGTCTACACTGTGCGAGCAAGTCAAACCTGGCGGCATTATTTCAGTGATGTTTTACAACTATAATGGCCTACT
CTTTAAGAATTTAATCTGTGGCAACCTTAACCATATTGAAAAAGGCATGCCCCACCGCAAACGTTTTAAGTTACAACCTC
AACAAGGAATAAAGCCTGAGTTGGTATATTCATGCCTAGAGCAAGCAGGTTTTAATATTTTGGGAAAAACCGGCGTTAGA
ACCTTTCATGACTATATGCAAAATCATGATATGGGAGACTTTAGTTTTGAGCAGATTGTCGCGATGGAGCAAAAGCTATG
TCGCCAAGAGCCTTTTCTATCGTTAGGCCGTTATATTCATGTTTATGCGCAAAAATCAGCATAA

Upstream 100 bases:

>100_bases
CTCGCATCGAGATATCCGATAATCACATCGGTTTAGTTAGGCTCTCGCAGCAGATATTGTGGTTCACAGTGGTTATTTGT
TGCTGCACTGATTTAATTTT

Downstream 100 bases:

>100_bases
TTACAGCGGCTGCTCTCGCTGAGCGAGCAGAGATTGATAGCGTTTGGTATTAATCTCTATTTAACCTTGTACTGTTAAAA
TAATCGTAGCAAAAGTTGAG

Product: putative metallothionein SmtA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MACCERIRARVISPTDNVQRMKTTVKQDRNFDGLAHKFAASIYGTAKGEIRQTVVWQDIEQILLALSKQPSNAAAELSVL
DAGGGLAQLSQKIAALGHNVSLCDLSSEMLSLAKQDISDNQLLKKYQFIHSPVQNIAEHLQVPVDLILFHAVMEWLAEPI
QALSTLCEQVKPGGIISVMFYNYNGLLFKNLICGNLNHIEKGMPHRKRFKLQPQQGIKPELVYSCLEQAGFNILGKTGVR
TFHDYMQNHDMGDFSFEQIVAMEQKLCRQEPFLSLGRYIHVYAQKSA

Sequences:

>Translated_287_residues
MACCERIRARVISPTDNVQRMKTTVKQDRNFDGLAHKFAASIYGTAKGEIRQTVVWQDIEQILLALSKQPSNAAAELSVL
DAGGGLAQLSQKIAALGHNVSLCDLSSEMLSLAKQDISDNQLLKKYQFIHSPVQNIAEHLQVPVDLILFHAVMEWLAEPI
QALSTLCEQVKPGGIISVMFYNYNGLLFKNLICGNLNHIEKGMPHRKRFKLQPQQGIKPELVYSCLEQAGFNILGKTGVR
TFHDYMQNHDMGDFSFEQIVAMEQKLCRQEPFLSLGRYIHVYAQKSA
>Mature_286_residues
ACCERIRARVISPTDNVQRMKTTVKQDRNFDGLAHKFAASIYGTAKGEIRQTVVWQDIEQILLALSKQPSNAAAELSVLD
AGGGLAQLSQKIAALGHNVSLCDLSSEMLSLAKQDISDNQLLKKYQFIHSPVQNIAEHLQVPVDLILFHAVMEWLAEPIQ
ALSTLCEQVKPGGIISVMFYNYNGLLFKNLICGNLNHIEKGMPHRKRFKLQPQQGIKPELVYSCLEQAGFNILGKTGVRT
FHDYMQNHDMGDFSFEQIVAMEQKLCRQEPFLSLGRYIHVYAQKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787151, Length=259, Percent_Identity=47.8764478764479, Blast_Score=272, Evalue=2e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 32217; Mature: 32086

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACCERIRARVISPTDNVQRMKTTVKQDRNFDGLAHKFAASIYGTAKGEIRQTVVWQDIE
CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QILLALSKQPSNAAAELSVLDAGGGLAQLSQKIAALGHNVSLCDLSSEMLSLAKQDISDN
HHHHHHHCCCCCHHHEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
QLLKKYQFIHSPVQNIAEHLQVPVDLILFHAVMEWLAEPIQALSTLCEQVKPGGIISVMF
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
YNYNGLLFKNLICGNLNHIEKGMPHRKRFKLQPQQGIKPELVYSCLEQAGFNILGKTGVR
ECCCCHHHHHHHHCCHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH
TFHDYMQNHDMGDFSFEQIVAMEQKLCRQEPFLSLGRYIHVYAQKSA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHEEEEEECCC
>Mature Secondary Structure 
ACCERIRARVISPTDNVQRMKTTVKQDRNFDGLAHKFAASIYGTAKGEIRQTVVWQDIE
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QILLALSKQPSNAAAELSVLDAGGGLAQLSQKIAALGHNVSLCDLSSEMLSLAKQDISDN
HHHHHHHCCCCCHHHEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHH
QLLKKYQFIHSPVQNIAEHLQVPVDLILFHAVMEWLAEPIQALSTLCEQVKPGGIISVMF
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
YNYNGLLFKNLICGNLNHIEKGMPHRKRFKLQPQQGIKPELVYSCLEQAGFNILGKTGVR
ECCCCHHHHHHHHCCHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH
TFHDYMQNHDMGDFSFEQIVAMEQKLCRQEPFLSLGRYIHVYAQKSA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7513784; 8905232; 9278503; 8566713 [H]