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The map label for this gene is codA [H]

Identifier: 167624084

GI number: 167624084

Start: 2608747

End: 2610042

Strand: Reverse

Name: codA [H]

Synonym: Shal_2160

Alternate gene names: 167624084

Gene position: 2610042-2608747 (Counterclockwise)

Preceding gene: 167624085

Following gene: 167624082

Centisome position: 49.93

GC content: 46.99

Gene sequence:

>1296_bases
ATGTCATCAGCAAATATGTTGATCAAAAACGTGACGCTAAACGGCAAAAAAGGCCTTCATCAACTACTCATTGAAGACGG
TCAGTTTAAGGCGATAGCACCTATGGCTGACACCATTGAGCTGCCAAGCTCAACGTCGTTAGACGTCATCGATGGTGAAG
GTGGCATGGCTGTTCCTCCTTTTTGTGAGCCTCATGTTCACTTAGACACAACCCAAACTGCTGGCGAGCCAAGCTGGAAT
ATTTCAGGCACCCTATTTGAAGGGATCGAACGTTGGTCTGAGCGTAAATCGATGCTGTCTATCGAAGACGTGAAATCACG
CGCCAAGCAAACACTAAAGTGGCAGATTGCTAACGGTATCCAGCACGTTCGTACTCACGTTGATGTGTCAGACCCGACGC
TTATCGCACTTAAAGCGATGCTTGAAGTGAAAGAAGAGATGAAGCAATGGGTTGATATCCAAATTGTTGCCTTCCCTCAA
GAAGGTATTTTGTCTTACCCGAATGGCAAAGAGTTACTCGAAGAAGCGGTAAAGCTTGGCGCTGATGTGATTGGTGCTAT
CCCACATTTTGAGTTCACCCGTGAATATGGCGTTGAGTCACTGCACTATGTGTTTGACCTTGCACGCAAGTACGACCGCC
TTATCGATGTGCATTGTGATGAAATTGATGATGAGCAGTCGCGCTTTGTTGAAACCGTTGCAGCCCTTGCCCACAAATAT
GAAATGGGTGAGCGCGTAACGGCGAGTCACACAACGGCGATGCATTCATACAATGGTGCTTACGCGTCGCGTCTGTTCCG
TTTACTTGGTATGTCGGGCATTAACTTTGTGGCTAACCCGCTTGTGAATATCCACTTGCAGGGACGTTTCGATGATTACC
CTAAGCGACGTGGTATTACACGTGTGAAAGAGATGCTAGCCGCTGACATTAACGTCTGTTTCGGTCACGATGATATTTTT
GACCCTTGGTATCCGCTAGGTACAGCCAATATGCTGCAAGTACTGCATATGGGCCTACATGTTTGCCAAATTATGGGTTA
CGATCAGATCAACAACTCACTAGAACTTATCACCAGCAAATCGGCTCGCACACTGAATATTCAAGATCAGTACGGGATTG
AACTCGGCAACCCTGGTAACCTGCTGGTTCTTCCTGCTGATAATGGATTTGATGCGGTGCGCCGTCAGGTGCCTGTGCGT
TACTCTGTGCGTCAGGGTAAAATGTTAGCTGAAACTAAAATTGCGCAAACGCAAATTCATTTAAGCGAAGTAGAAGACGT
GACCTTCCGCCGTTAA

Upstream 100 bases:

>100_bases
TTCAGCTATCTCTTGATAGATGAAATTCAAGTTCGTATCAAAAAACAAAATTTAGTTAAATCAGATTGTAAAGATGCAAC
CAATGCATAAGGAAAACTCC

Downstream 100 bases:

>100_bases
GACAACTTGCTTAAAAGGCTAATAGCTTTAGAAAAGTGGTAAATCTATTTGTGCTCAGTAAAACTTGAAGCGTAGATAGG
CTTACCACTTTTGATTAAAA

Product: cytosine deaminase

Products: NA

Alternate protein names: Cytosine aminohydrolase [H]

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MSSANMLIKNVTLNGKKGLHQLLIEDGQFKAIAPMADTIELPSSTSLDVIDGEGGMAVPPFCEPHVHLDTTQTAGEPSWN
ISGTLFEGIERWSERKSMLSIEDVKSRAKQTLKWQIANGIQHVRTHVDVSDPTLIALKAMLEVKEEMKQWVDIQIVAFPQ
EGILSYPNGKELLEEAVKLGADVIGAIPHFEFTREYGVESLHYVFDLARKYDRLIDVHCDEIDDEQSRFVETVAALAHKY
EMGERVTASHTTAMHSYNGAYASRLFRLLGMSGINFVANPLVNIHLQGRFDDYPKRRGITRVKEMLAADINVCFGHDDIF
DPWYPLGTANMLQVLHMGLHVCQIMGYDQINNSLELITSKSARTLNIQDQYGIELGNPGNLLVLPADNGFDAVRRQVPVR
YSVRQGKMLAETKIAQTQIHLSEVEDVTFRR

Sequences:

>Translated_431_residues
MSSANMLIKNVTLNGKKGLHQLLIEDGQFKAIAPMADTIELPSSTSLDVIDGEGGMAVPPFCEPHVHLDTTQTAGEPSWN
ISGTLFEGIERWSERKSMLSIEDVKSRAKQTLKWQIANGIQHVRTHVDVSDPTLIALKAMLEVKEEMKQWVDIQIVAFPQ
EGILSYPNGKELLEEAVKLGADVIGAIPHFEFTREYGVESLHYVFDLARKYDRLIDVHCDEIDDEQSRFVETVAALAHKY
EMGERVTASHTTAMHSYNGAYASRLFRLLGMSGINFVANPLVNIHLQGRFDDYPKRRGITRVKEMLAADINVCFGHDDIF
DPWYPLGTANMLQVLHMGLHVCQIMGYDQINNSLELITSKSARTLNIQDQYGIELGNPGNLLVLPADNGFDAVRRQVPVR
YSVRQGKMLAETKIAQTQIHLSEVEDVTFRR
>Mature_430_residues
SSANMLIKNVTLNGKKGLHQLLIEDGQFKAIAPMADTIELPSSTSLDVIDGEGGMAVPPFCEPHVHLDTTQTAGEPSWNI
SGTLFEGIERWSERKSMLSIEDVKSRAKQTLKWQIANGIQHVRTHVDVSDPTLIALKAMLEVKEEMKQWVDIQIVAFPQE
GILSYPNGKELLEEAVKLGADVIGAIPHFEFTREYGVESLHYVFDLARKYDRLIDVHCDEIDDEQSRFVETVAALAHKYE
MGERVTASHTTAMHSYNGAYASRLFRLLGMSGINFVANPLVNIHLQGRFDDYPKRRGITRVKEMLAADINVCFGHDDIFD
PWYPLGTANMLQVLHMGLHVCQIMGYDQINNSLELITSKSARTLNIQDQYGIELGNPGNLLVLPADNGFDAVRRQVPVRY
SVRQGKMLAETKIAQTQIHLSEVEDVTFRR

Specific function: Unknown

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786531, Length=430, Percent_Identity=72.7906976744186, Blast_Score=660, Evalue=0.0,
Organism=Escherichia coli, GI1786517, Length=323, Percent_Identity=23.5294117647059, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.4.1 [H]

Molecular weight: Translated: 48374; Mature: 48243

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSANMLIKNVTLNGKKGLHQLLIEDGQFKAIAPMADTIELPSSTSLDVIDGEGGMAVPP
CCCCCEEEEEEEECCHHHHHHHHHCCCCEEEECCCHHHEECCCCCCEEEEECCCCEECCC
FCEPHVHLDTTQTAGEPSWNISGTLFEGIERWSERKSMLSIEDVKSRAKQTLKWQIANGI
CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QHVRTHVDVSDPTLIALKAMLEVKEEMKQWVDIQIVAFPQEGILSYPNGKELLEEAVKLG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHC
ADVIGAIPHFEFTREYGVESLHYVFDLARKYDRLIDVHCDEIDDEQSRFVETVAALAHKY
HHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
EMGERVTASHTTAMHSYNGAYASRLFRLLGMSGINFVANPLVNIHLQGRFDDYPKRRGIT
HCCCCEEHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCEEEEEEECCCCCCHHHCCHH
RVKEMLAADINVCFGHDDIFDPWYPLGTANMLQVLHMGLHVCQIMGYDQINNSLELITSK
HHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEECC
SARTLNIQDQYGIELGNPGNLLVLPADNGFDAVRRQVPVRYSVRQGKMLAETKIAQTQIH
CCEEEECCHHCCEEECCCCCEEEEECCCCHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHH
LSEVEDVTFRR
HHHHHHHHCCC
>Mature Secondary Structure 
SSANMLIKNVTLNGKKGLHQLLIEDGQFKAIAPMADTIELPSSTSLDVIDGEGGMAVPP
CCCCEEEEEEEECCHHHHHHHHHCCCCEEEECCCHHHEECCCCCCEEEEECCCCEECCC
FCEPHVHLDTTQTAGEPSWNISGTLFEGIERWSERKSMLSIEDVKSRAKQTLKWQIANGI
CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QHVRTHVDVSDPTLIALKAMLEVKEEMKQWVDIQIVAFPQEGILSYPNGKELLEEAVKLG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHC
ADVIGAIPHFEFTREYGVESLHYVFDLARKYDRLIDVHCDEIDDEQSRFVETVAALAHKY
HHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
EMGERVTASHTTAMHSYNGAYASRLFRLLGMSGINFVANPLVNIHLQGRFDDYPKRRGIT
HCCCCEEHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCEEEEEEECCCCCCHHHCCHH
RVKEMLAADINVCFGHDDIFDPWYPLGTANMLQVLHMGLHVCQIMGYDQINNSLELITSK
HHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEECC
SARTLNIQDQYGIELGNPGNLLVLPADNGFDAVRRQVPVRYSVRQGKMLAETKIAQTQIH
CCEEEECCHHCCEEECCCCCEEEEECCCCHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHH
LSEVEDVTFRR
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1640834; 8450832; 9278503 [H]