Click here to switch to the map view.

The map label for this gene is ydiS [C]

Identifier: 167624067

GI number: 167624067

Start: 2582089

End: 2583747

Strand: Direct

Name: ydiS [C]

Synonym: Shal_2143

Alternate gene names: 167624067

Gene position: 2582089-2583747 (Clockwise)

Preceding gene: 167624066

Following gene: 167624068

Centisome position: 49.4

GC content: 44.61

Gene sequence:

>1659_bases
ATGAGCGAAGTAATACGGGAAGTAATGGAGTTTGATGTTGTGATTGTCGGGGCTGGTCCGTCAGGGCTGTCTGCCGCCTG
TAGACTCATGCAGCTAAGCAAAGAGAATAACCAGCAAATTTCTGTTTGTGTCGTCGAAAAAGGTTCTGAAATCGGTGCGC
ATATCCTATCTGGCGCCATTATCGAACCTCGCGCAATGAATGAATTGTTTCCCGATTGGCAAGCGCAAGGCGCTCCGCTA
ACCACTGGCGTAGCTAAAGACACATTATTGTTTTTGTCTGATGAAAATAAGTCTATTACTTTGCCTCATGCCGCTATTCC
CAAGCCACTTCATAATCAGGGAAATTATATCGCTAGCTTAGGTAATGTTTGCCGTTGGTTGGCAGAACAAGCTGAGGCAC
TAGGGGTCGAGGTATTCCCCGGTTTTGCAGCCGCTGAAGTTCTTTACCATGATGATGGAACCGTTAAAGGTATAGCAACA
GGGGATATGGGAATAGGTAAAGACGGCCAACCCAATTCCCAATATATGCAAGGAATGGAACTGCACGCCAAATACACCTT
ATTCGGCGAGGGCTGCCGAGGTCATCTAGGAAAAGAACTCATAAACAAGTTTGGCTTAGCCGATGAAAGTGATGCCCAGC
ACTATGGACTGGGAATGAAAGAGATCTGGGACATTAGTCCAGAACTGCACTCTCCGGGGTTAGTTGTCCATGGCTTTGGC
TGGCCCCTAGATAAAAATGCCAGCGGCGGATTTTTCTTATACCACACCGATAATAATCAGGCTGTTGTAGGTTTAATTGT
CGATCTCAATTATAGCAATACGCATTTAAGTCCATTTGATGAATTCCAGCGCTTAAAGCATCACCCTGAATTGGCGCAGT
ATTTAAAAGATGGGAAAAGAATATCCTATGGCGCAAGGGCAATTGCCAAAGGTGGACTCAATGCTTTACCTGTCATGAGC
TTTGCTGGAGGCATGTTGTTAGGCTGTGATGCTGGAACCTTAAATGTTGCAAAAATTAAGGGTACCCACACAGCGATGAA
GTCGGGAATGTTGGCAGCAGAAACTATTTTTGATGTGCTAGGTAACGAACTTGACTCAGAGTCTGCCGAGTCACTATTTG
AATCTAAGTTCAAACAGTCTTGGCTTTATGAAGAGCTATATAGCAGTCGAAATTTTGGTCCAGCTTTACACAAATTCGGC
ACTCTTGCCGGAGGGGGCTTTAATTATATTGATCAAAACTGGTTTGCTGGAAAGTTACCGCTCTCACTACGGGATAATAT
CGAGGACCATAGTTGTCTTCTTCCTACAGCCAAGTCTAAGCCCATCATGTACCCCAAGCCTGACGGCGTTTTAAGTTTTG
ATAAGCTATCTTCGGTGTTTCTGTCCAATACAAACCATGAAGAAGATCAGCCTTGTCATTTAACCCTTCTTGACCATTCG
ATCCCGTCAAAATTTACAATTCCTTTATATGATGAGCCCGCGACTCGATATTGCCCTGCTGGAGTTTACGAATTAGTTGA
TGAAGGCGAAGAAACAAGACTGCAAATTAATGCTCAAAACTGTTTACATTGTAAAACCTGTGACATCAAAGAGCCGTCGC
AAAACATCAGGTGGACGGTTCCAGAGGGGGGAGGCGGACCAAACTATCCAAATATGTAA

Upstream 100 bases:

>100_bases
TGTCAATGCCTTCTTTGACAAACGCGACGCGAGTTTCACTGGCAAGTAACTAGTTTATGAATCAAATGGATAATTAGCGC
TGTTTTTAAGGACGTTATTG

Downstream 100 bases:

>100_bases
TTAACAAGATGTAATGATTTTAAGAAACCATAAATTATCAACGGTTTCTAGATCATAGGATATTAATTCATCTTGTAATC
TTGAGATCCCAATTGGAATG

Product: electron-transferring-flavoprotein dehydrogenase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MSEVIREVMEFDVVIVGAGPSGLSAACRLMQLSKENNQQISVCVVEKGSEIGAHILSGAIIEPRAMNELFPDWQAQGAPL
TTGVAKDTLLFLSDENKSITLPHAAIPKPLHNQGNYIASLGNVCRWLAEQAEALGVEVFPGFAAAEVLYHDDGTVKGIAT
GDMGIGKDGQPNSQYMQGMELHAKYTLFGEGCRGHLGKELINKFGLADESDAQHYGLGMKEIWDISPELHSPGLVVHGFG
WPLDKNASGGFFLYHTDNNQAVVGLIVDLNYSNTHLSPFDEFQRLKHHPELAQYLKDGKRISYGARAIAKGGLNALPVMS
FAGGMLLGCDAGTLNVAKIKGTHTAMKSGMLAAETIFDVLGNELDSESAESLFESKFKQSWLYEELYSSRNFGPALHKFG
TLAGGGFNYIDQNWFAGKLPLSLRDNIEDHSCLLPTAKSKPIMYPKPDGVLSFDKLSSVFLSNTNHEEDQPCHLTLLDHS
IPSKFTIPLYDEPATRYCPAGVYELVDEGEETRLQINAQNCLHCKTCDIKEPSQNIRWTVPEGGGGPNYPNM

Sequences:

>Translated_552_residues
MSEVIREVMEFDVVIVGAGPSGLSAACRLMQLSKENNQQISVCVVEKGSEIGAHILSGAIIEPRAMNELFPDWQAQGAPL
TTGVAKDTLLFLSDENKSITLPHAAIPKPLHNQGNYIASLGNVCRWLAEQAEALGVEVFPGFAAAEVLYHDDGTVKGIAT
GDMGIGKDGQPNSQYMQGMELHAKYTLFGEGCRGHLGKELINKFGLADESDAQHYGLGMKEIWDISPELHSPGLVVHGFG
WPLDKNASGGFFLYHTDNNQAVVGLIVDLNYSNTHLSPFDEFQRLKHHPELAQYLKDGKRISYGARAIAKGGLNALPVMS
FAGGMLLGCDAGTLNVAKIKGTHTAMKSGMLAAETIFDVLGNELDSESAESLFESKFKQSWLYEELYSSRNFGPALHKFG
TLAGGGFNYIDQNWFAGKLPLSLRDNIEDHSCLLPTAKSKPIMYPKPDGVLSFDKLSSVFLSNTNHEEDQPCHLTLLDHS
IPSKFTIPLYDEPATRYCPAGVYELVDEGEETRLQINAQNCLHCKTCDIKEPSQNIRWTVPEGGGGPNYPNM
>Mature_551_residues
SEVIREVMEFDVVIVGAGPSGLSAACRLMQLSKENNQQISVCVVEKGSEIGAHILSGAIIEPRAMNELFPDWQAQGAPLT
TGVAKDTLLFLSDENKSITLPHAAIPKPLHNQGNYIASLGNVCRWLAEQAEALGVEVFPGFAAAEVLYHDDGTVKGIATG
DMGIGKDGQPNSQYMQGMELHAKYTLFGEGCRGHLGKELINKFGLADESDAQHYGLGMKEIWDISPELHSPGLVVHGFGW
PLDKNASGGFFLYHTDNNQAVVGLIVDLNYSNTHLSPFDEFQRLKHHPELAQYLKDGKRISYGARAIAKGGLNALPVMSF
AGGMLLGCDAGTLNVAKIKGTHTAMKSGMLAAETIFDVLGNELDSESAESLFESKFKQSWLYEELYSSRNFGPALHKFGT
LAGGGFNYIDQNWFAGKLPLSLRDNIEDHSCLLPTAKSKPIMYPKPDGVLSFDKLSSVFLSNTNHEEDQPCHLTLLDHSI
PSKFTIPLYDEPATRYCPAGVYELVDEGEETRLQINAQNCLHCKTCDIKEPSQNIRWTVPEGGGGPNYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=561, Percent_Identity=53.6541889483066, Blast_Score=589, Evalue=1e-168,
Organism=Escherichia coli, GI1787991, Length=400, Percent_Identity=25.75, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1786227, Length=332, Percent_Identity=25.6024096385542, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI87082155, Length=373, Percent_Identity=23.8605898123324, Blast_Score=84, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25144720, Length=560, Percent_Identity=50, Blast_Score=554, Evalue=1e-158,
Organism=Saccharomyces cerevisiae, GI6324932, Length=569, Percent_Identity=44.4639718804921, Blast_Score=469, Evalue=1e-133,
Organism=Drosophila melanogaster, GI24652256, Length=558, Percent_Identity=53.584229390681, Blast_Score=600, Evalue=1e-172,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60205; Mature: 60074

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVIREVMEFDVVIVGAGPSGLSAACRLMQLSKENNQQISVCVVEKGSEIGAHILSGAI
CHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCE
IEPRAMNELFPDWQAQGAPLTTGVAKDTLLFLSDENKSITLPHAAIPKPLHNQGNYIASL
ECCHHHHHHCCCCCCCCCCEECCCCCCEEEEEECCCCEEECCHHHCCCCCCCCCCHHHHH
GNVCRWLAEQAEALGVEVFPGFAAAEVLYHDDGTVKGIATGDMGIGKDGQPNSQYMQGME
HHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHCCHH
LHAKYTLFGEGCRGHLGKELINKFGLADESDAQHYGLGMKEIWDISPELHSPGLVVHGFG
EEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEECC
WPLDKNASGGFFLYHTDNNQAVVGLIVDLNYSNTHLSPFDEFQRLKHHPELAQYLKDGKR
CCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCE
ISYGARAIAKGGLNALPVMSFAGGMLLGCDAGTLNVAKIKGTHTAMKSGMLAAETIFDVL
EEHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCEEEEEECCHHHHHHCCCHHHHHHHHHH
GNELDSESAESLFESKFKQSWLYEELYSSRNFGPALHKFGTLAGGGFNYIDQNWFAGKLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
LSLRDNIEDHSCLLPTAKSKPIMYPKPDGVLSFDKLSSVFLSNTNHEEDQPCHLTLLDHS
CHHHCCCCCCCEECCCCCCCCEECCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEECC
IPSKFTIPLYDEPATRYCPAGVYELVDEGEETRLQINAQNCLHCKTCDIKEPSQNIRWTV
CCCEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEC
PEGGGGPNYPNM
CCCCCCCCCCCC
>Mature Secondary Structure 
SEVIREVMEFDVVIVGAGPSGLSAACRLMQLSKENNQQISVCVVEKGSEIGAHILSGAI
HHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHCCCE
IEPRAMNELFPDWQAQGAPLTTGVAKDTLLFLSDENKSITLPHAAIPKPLHNQGNYIASL
ECCHHHHHHCCCCCCCCCCEECCCCCCEEEEEECCCCEEECCHHHCCCCCCCCCCHHHHH
GNVCRWLAEQAEALGVEVFPGFAAAEVLYHDDGTVKGIATGDMGIGKDGQPNSQYMQGME
HHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHCCHH
LHAKYTLFGEGCRGHLGKELINKFGLADESDAQHYGLGMKEIWDISPELHSPGLVVHGFG
EEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHCCCCCCCCCCEEEEECC
WPLDKNASGGFFLYHTDNNQAVVGLIVDLNYSNTHLSPFDEFQRLKHHPELAQYLKDGKR
CCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCE
ISYGARAIAKGGLNALPVMSFAGGMLLGCDAGTLNVAKIKGTHTAMKSGMLAAETIFDVL
EEHHHHHHHHCCCCCCHHHHHCCCEEEECCCCCEEEEEECCHHHHHHCCCHHHHHHHHHH
GNELDSESAESLFESKFKQSWLYEELYSSRNFGPALHKFGTLAGGGFNYIDQNWFAGKLP
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
LSLRDNIEDHSCLLPTAKSKPIMYPKPDGVLSFDKLSSVFLSNTNHEEDQPCHLTLLDHS
CHHHCCCCCCCEECCCCCCCCEECCCCCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEECC
IPSKFTIPLYDEPATRYCPAGVYELVDEGEETRLQINAQNCLHCKTCDIKEPSQNIRWTV
CCCEEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCEEEECCCCCCCCCCCEEEC
PEGGGGPNYPNM
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]