| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167624036
Identifier: 167624036
GI number: 167624036
Start: 2544610
End: 2545059
Strand: Direct
Name: 167624036
Synonym: Shal_2112
Alternate gene names: NA
Gene position: 2544610-2545059 (Clockwise)
Preceding gene: 167624035
Following gene: 167624037
Centisome position: 48.68
GC content: 42.67
Gene sequence:
>450_bases ATGAAAACAACTAATACTAAAAACAGTGCGGCTAGCAACTTTTCAAATATAAAGCTCGGTGAAAAATTACCAGAACTTAC TGTACCTATTACTGTTGCCTTGATCACTAGTGGCGCCATCGCTACCCGGGATTTCTTTCCTGGGCATCACGATAAAGATG CAGCTAAAGAATTGGGTTCTCCACATATTTTCATGAATATCCTGACAACGAATGCACTCGTGCAAGGGTTTGTCGAAAAG TGGGGAGGCTCAAATATTCGTTTCACCAATCTAAACATTAAGCTCGGTATGCCAAATTATCCAGGTGACACCATGGTCTT TACTGGAGAAGTGAGCATGCTTGACCCAAATAACCAATCAGCAGTTGTTAGCCTAGTAGGAAAGAACTCGATGGGCGCCC ATGTTAGTGGCACTGTTTCTATTACATGGCCTCGCGATTTCGTGCAATAA
Upstream 100 bases:
>100_bases CGCGCAATATCACTAGGACTGGGTGGTAGCCAAGCAATCGCCGAGCGGTTAGGTGACTGGTTAGCAGAAAATGACAAACT TGGATGGAAGTATGACCTCA
Downstream 100 bases:
>100_bases AAGGAGAATTTAGATGGATGCATCGATCAGTGGTAAGGCTGCGATTGTTGGTTTAGGCGCTACTGAGTTTTCTAAAAACT CTGGGCGTACAGAATTACGC
Product: dehydratase
Products: NA
Alternate protein names: MaoC Domain-Containing Dehydratase; MaoC-Like Dehydratase; MaoC Domain-Containing Protein Dehydratase; Dehydrogenase; MaoC Like Domain Protein; MaoC Like Domain-Containing Protein; MaoC Domain Containing Protein Dehydratase; MaoC Domain Protein Dehydratase
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKTTNTKNSAASNFSNIKLGEKLPELTVPITVALITSGAIATRDFFPGHHDKDAAKELGSPHIFMNILTTNALVQGFVEK WGGSNIRFTNLNIKLGMPNYPGDTMVFTGEVSMLDPNNQSAVVSLVGKNSMGAHVSGTVSITWPRDFVQ
Sequences:
>Translated_149_residues MKTTNTKNSAASNFSNIKLGEKLPELTVPITVALITSGAIATRDFFPGHHDKDAAKELGSPHIFMNILTTNALVQGFVEK WGGSNIRFTNLNIKLGMPNYPGDTMVFTGEVSMLDPNNQSAVVSLVGKNSMGAHVSGTVSITWPRDFVQ >Mature_149_residues MKTTNTKNSAASNFSNIKLGEKLPELTVPITVALITSGAIATRDFFPGHHDKDAAKELGSPHIFMNILTTNALVQGFVEK WGGSNIRFTNLNIKLGMPNYPGDTMVFTGEVSMLDPNNQSAVVSLVGKNSMGAHVSGTVSITWPRDFVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16035; Mature: 16035
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTNTKNSAASNFSNIKLGEKLPELTVPITVALITSGAIATRDFFPGHHDKDAAKELGS CCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEEECCCEEECCCCCCCCCCHHHHHCCC PHIFMNILTTNALVQGFVEKWGGSNIRFTNLNIKLGMPNYPGDTMVFTGEVSMLDPNNQS CEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEECEEEEECCCCCC AVVSLVGKNSMGAHVSGTVSITWPRDFVQ EEEEEECCCCCCCEEEEEEEEECCHHHCC >Mature Secondary Structure MKTTNTKNSAASNFSNIKLGEKLPELTVPITVALITSGAIATRDFFPGHHDKDAAKELGS CCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEEEEECCCEEECCCCCCCCCCHHHHHCCC PHIFMNILTTNALVQGFVEKWGGSNIRFTNLNIKLGMPNYPGDTMVFTGEVSMLDPNNQS CEEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEECEEEEECCCCCC AVVSLVGKNSMGAHVSGTVSITWPRDFVQ EEEEEECCCCCCCEEEEEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA