Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is 167623995

Identifier: 167623995

GI number: 167623995

Start: 2493622

End: 2494647

Strand: Reverse

Name: 167623995

Synonym: Shal_2069

Alternate gene names: NA

Gene position: 2494647-2493622 (Counterclockwise)

Preceding gene: 167624000

Following gene: 167623993

Centisome position: 47.73

GC content: 40.74

Gene sequence:

>1026_bases
TTGACTAACGCATCAATTAACAATGTTTTGGCGGACTTTTTCGAGTCTGCAGACTTTGAAAAAGTTACAAATATTCAATC
CCTTTGGTCCGGATATGGTGAGATCGCTAGATATCGTTTTACCTCTGTGAAGTTAATTGAGAAGTTTGGATTCAAACTCT
TTATTGTTAAACACATTGCACCTCCTCAGCAGGTACAACATCCAAGGGGCTGGTCAGGTTCGGTCTCTCATCAACGAAAA
ATAGACTCTTATCAAGTTGAAGCTAACTTCTATCAAACTTTAGCTAAACGTTGCAATGATGACTGCTTAGTCCCCACTTT
CTTAGGTGAGCGCCACTTTGTCGAAAAAGGACAAGCAAGCCAACTGATCTTAATGTCTGATCTTGATAGTCAAGGTTTTC
CTGTTCGTGCAGCTAGTTTGAATCTGGAACAGACAAAGTTATGTCTTCGTTGGCTAGCGCAGTTTCATGCAAATTTTATG
CACCGAACAACTGACAATACTCACGATGGGCTTTGGCCCATCGGCAGTTACTGGCACCTTGCTACTCGACAAGAGGAGTG
GCAAGTTATGCCGGAATCTGAACTTAAACAGCAAGCAGGTAAAATAGATAAGCTATTGAATAATTGTGAATATAAGACAA
TTATTCATGGTGATGCTAAAGTTGCCAACTTCTGCTTTAATGACGATTTTACTGATATTGCTGCTGTCGACTTTCAATAC
GTGGGCAGTGGCTGCGGCGTTAAAGACCTTGTATACCTGATTGGCAGTTGCTTATCTGAGACCGACTGTGAGAATAATTT
TACACAATTAGTGAATGAGTATTTCACACAATTAAGGCAGGCACTAAGCTTATATCAGCCACAGTTAGACTCAAATTTAG
TCGTTAAAGATTGGCACAGATTAGTGGACTTAGCCTGGGCTGACTTCGAACGCTTTCTTGTTGGTTGGGCTCCTAACCAT
AAAAAAAGAAATCGATTTAGTCAGCAGATCACAAACAGAGCACTAGAATCCATTCGAGGTTTCTGA

Upstream 100 bases:

>100_bases
TATACTTAGTCTGTTTTGAATTTCGTTGTATATCAATTATAGTACAGCGTTCTACCTGTCTGGCTCTTGAACAAGAATTC
ACTAAGGGACATTAATAGAT

Downstream 100 bases:

>100_bases
ATAATATTTTGAGCATCGAGCATCGAGCATCGAGCATCGAGCCAATATTTTTATTCTAGAGGGCTAGCTTAGTTAGCCAT
TTAATTAACTAATTACTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Protein Containing Kinase Domain; Kinase Domain-Containing Protein

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTNASINNVLADFFESADFEKVTNIQSLWSGYGEIARYRFTSVKLIEKFGFKLFIVKHIAPPQQVQHPRGWSGSVSHQRK
IDSYQVEANFYQTLAKRCNDDCLVPTFLGERHFVEKGQASQLILMSDLDSQGFPVRAASLNLEQTKLCLRWLAQFHANFM
HRTTDNTHDGLWPIGSYWHLATRQEEWQVMPESELKQQAGKIDKLLNNCEYKTIIHGDAKVANFCFNDDFTDIAAVDFQY
VGSGCGVKDLVYLIGSCLSETDCENNFTQLVNEYFTQLRQALSLYQPQLDSNLVVKDWHRLVDLAWADFERFLVGWAPNH
KKRNRFSQQITNRALESIRGF

Sequences:

>Translated_341_residues
MTNASINNVLADFFESADFEKVTNIQSLWSGYGEIARYRFTSVKLIEKFGFKLFIVKHIAPPQQVQHPRGWSGSVSHQRK
IDSYQVEANFYQTLAKRCNDDCLVPTFLGERHFVEKGQASQLILMSDLDSQGFPVRAASLNLEQTKLCLRWLAQFHANFM
HRTTDNTHDGLWPIGSYWHLATRQEEWQVMPESELKQQAGKIDKLLNNCEYKTIIHGDAKVANFCFNDDFTDIAAVDFQY
VGSGCGVKDLVYLIGSCLSETDCENNFTQLVNEYFTQLRQALSLYQPQLDSNLVVKDWHRLVDLAWADFERFLVGWAPNH
KKRNRFSQQITNRALESIRGF
>Mature_340_residues
TNASINNVLADFFESADFEKVTNIQSLWSGYGEIARYRFTSVKLIEKFGFKLFIVKHIAPPQQVQHPRGWSGSVSHQRKI
DSYQVEANFYQTLAKRCNDDCLVPTFLGERHFVEKGQASQLILMSDLDSQGFPVRAASLNLEQTKLCLRWLAQFHANFMH
RTTDNTHDGLWPIGSYWHLATRQEEWQVMPESELKQQAGKIDKLLNNCEYKTIIHGDAKVANFCFNDDFTDIAAVDFQYV
GSGCGVKDLVYLIGSCLSETDCENNFTQLVNEYFTQLRQALSLYQPQLDSNLVVKDWHRLVDLAWADFERFLVGWAPNHK
KRNRFSQQITNRALESIRGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39326; Mature: 39195

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNASINNVLADFFESADFEKVTNIQSLWSGYGEIARYRFTSVKLIEKFGFKLFIVKHIA
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
PPQQVQHPRGWSGSVSHQRKIDSYQVEANFYQTLAKRCNDDCLVPTFLGERHFVEKGQAS
CHHHHCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCCC
QLILMSDLDSQGFPVRAASLNLEQTKLCLRWLAQFHANFMHRTTDNTHDGLWPIGSYWHL
EEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
ATRQEEWQVMPESELKQQAGKIDKLLNNCEYKTIIHGDAKVANFCFNDDFTDIAAVDFQY
CCCCHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCCHHHHHHHHH
VGSGCGVKDLVYLIGSCLSETDCENNFTQLVNEYFTQLRQALSLYQPQLDSNLVVKDWHR
HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LVDLAWADFERFLVGWAPNHKKRNRFSQQITNRALESIRGF
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNASINNVLADFFESADFEKVTNIQSLWSGYGEIARYRFTSVKLIEKFGFKLFIVKHIA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
PPQQVQHPRGWSGSVSHQRKIDSYQVEANFYQTLAKRCNDDCLVPTFLGERHFVEKGQAS
CHHHHCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCCC
QLILMSDLDSQGFPVRAASLNLEQTKLCLRWLAQFHANFMHRTTDNTHDGLWPIGSYWHL
EEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
ATRQEEWQVMPESELKQQAGKIDKLLNNCEYKTIIHGDAKVANFCFNDDFTDIAAVDFQY
CCCCHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCCCCCHHHHHHHHH
VGSGCGVKDLVYLIGSCLSETDCENNFTQLVNEYFTQLRQALSLYQPQLDSNLVVKDWHR
HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LVDLAWADFERFLVGWAPNHKKRNRFSQQITNRALESIRGF
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA