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The map label for this gene is 167623991

Identifier: 167623991

GI number: 167623991

Start: 2488481

End: 2489521

Strand: Direct

Name: 167623991

Synonym: Shal_2065

Alternate gene names: NA

Gene position: 2488481-2489521 (Clockwise)

Preceding gene: 167623990

Following gene: 167623992

Centisome position: 47.61

GC content: 42.84

Gene sequence:

>1041_bases
ATGATGAAAATAGTTAAATTAACTTTACTCGTTGCCGCGGTTTTAGCTTCACCGAGTGTTATGGCCGATGCCTATAAATT
TTATGGACGTATCGATTATTCGATTACACACTCTGATAGTGGTAGCGCAACCCATAGCGGTAAAAGCGGTACTGTTTTAG
AAAACAACTGGAGTCGCTTAGGGATTAAAGGTGATGCGGCAATCAATGAAGATTTCACTGTCTTCTACCAAATTGAAGTT
GGCGTAAATGGCGCGACGGAAGGTAAGCAAAATAATCCGTTCTCTGCGCGTCCTACCTTTCTAGGTATTAAGCACTCTAC
AGTCGGCCAACTTGCTGCAGGTCGTATCGACCCTGTATTCAAAATGGCGAAAGGCACTGCCGATGCCATGGATATGTACT
CACTAAAGCATGACCGCTTGTTTGCTGGTGATAAACGTTGGGGGGATTCATTAGAATATAAAACCGTAAAATGGAACAAG
CTACAATTTGGCGCCAGCTATATTCTAGAAGATAATTACTATGGTGAAGATGATGTGCGCCGTGATAACGGAAACTACCA
GGTCGCTTTAACCTATGGCGATAAACTATTCAAAAGCGGTGACTTGTATCTAGCCGCTGCATACACCGATGGTGTAGAAG
ACATTAAAGGCTTTCGTGCAGTCGCTCAGTATAAGATTGACAAGCTAATGCTAGGCTCAATTTATCAAAGCTCAGAAATC
GTGAATCCAAACTTAGATAACTGGCAGCAACGTGATGGCGATGGCTTTATCGTGAGTGCTAAATATCAGTTTGATAAGCT
AACATTAAAGGCTCAATATGGTCAGGACGATTCGGGTACAGGTAAAATTGCTGGCCGTGTTTATGATAAATTAGGCGCAG
CAGCGACTGAGGTTCCAGAGGTTTCACAGTGGGCTATTGGTGCTGAATATCGTCTTTCAAAATCGACTCGAGTACATACG
GAGCTTGGCCAATTTGACGTGAAACAATACTCAGATTTTGACGACACCATCATGAGTGTTGGTTTTAGACTCGACTTCTA
A

Upstream 100 bases:

>100_bases
AGCATAATAAAAACTAACCCAGCTATAGATGTCGACTCCTAATCGCCTCTAGAGTGGGGAGTCGTCTGTCTTTCAAATGA
ATAAATAATTAAGAGAGAAG

Downstream 100 bases:

>100_bases
ACTGAGTTTTTCGCGCCTAATACATCTATTTTTTCATCTCTAGCTTTTTATTTCTAGTTTTACGATTTGCCTCTATGGAG
CGTATAAGGATATACGCTCC

Product: porin

Products: NA

Alternate protein names: Porin Gram-Negative Type; Outer Membrane Protein; Gram-Negative Porin Superfamily

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MMKIVKLTLLVAAVLASPSVMADAYKFYGRIDYSITHSDSGSATHSGKSGTVLENNWSRLGIKGDAAINEDFTVFYQIEV
GVNGATEGKQNNPFSARPTFLGIKHSTVGQLAAGRIDPVFKMAKGTADAMDMYSLKHDRLFAGDKRWGDSLEYKTVKWNK
LQFGASYILEDNYYGEDDVRRDNGNYQVALTYGDKLFKSGDLYLAAAYTDGVEDIKGFRAVAQYKIDKLMLGSIYQSSEI
VNPNLDNWQQRDGDGFIVSAKYQFDKLTLKAQYGQDDSGTGKIAGRVYDKLGAAATEVPEVSQWAIGAEYRLSKSTRVHT
ELGQFDVKQYSDFDDTIMSVGFRLDF

Sequences:

>Translated_346_residues
MMKIVKLTLLVAAVLASPSVMADAYKFYGRIDYSITHSDSGSATHSGKSGTVLENNWSRLGIKGDAAINEDFTVFYQIEV
GVNGATEGKQNNPFSARPTFLGIKHSTVGQLAAGRIDPVFKMAKGTADAMDMYSLKHDRLFAGDKRWGDSLEYKTVKWNK
LQFGASYILEDNYYGEDDVRRDNGNYQVALTYGDKLFKSGDLYLAAAYTDGVEDIKGFRAVAQYKIDKLMLGSIYQSSEI
VNPNLDNWQQRDGDGFIVSAKYQFDKLTLKAQYGQDDSGTGKIAGRVYDKLGAAATEVPEVSQWAIGAEYRLSKSTRVHT
ELGQFDVKQYSDFDDTIMSVGFRLDF
>Mature_346_residues
MMKIVKLTLLVAAVLASPSVMADAYKFYGRIDYSITHSDSGSATHSGKSGTVLENNWSRLGIKGDAAINEDFTVFYQIEV
GVNGATEGKQNNPFSARPTFLGIKHSTVGQLAAGRIDPVFKMAKGTADAMDMYSLKHDRLFAGDKRWGDSLEYKTVKWNK
LQFGASYILEDNYYGEDDVRRDNGNYQVALTYGDKLFKSGDLYLAAAYTDGVEDIKGFRAVAQYKIDKLMLGSIYQSSEI
VNPNLDNWQQRDGDGFIVSAKYQFDKLTLKAQYGQDDSGTGKIAGRVYDKLGAAATEVPEVSQWAIGAEYRLSKSTRVHT
ELGQFDVKQYSDFDDTIMSVGFRLDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38400; Mature: 38400

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKIVKLTLLVAAVLASPSVMADAYKFYGRIDYSITHSDSGSATHSGKSGTVLENNWSRL
CCHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEECCCCEE
GIKGDAAINEDFTVFYQIEVGVNGATEGKQNNPFSARPTFLGIKHSTVGQLAAGRIDPVF
CEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCHHH
KMAKGTADAMDMYSLKHDRLFAGDKRWGDSLEYKTVKWNKLQFGASYILEDNYYGEDDVR
HHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEEEECEEEEEECCCCCCCCCE
RDNGNYQVALTYGDKLFKSGDLYLAAAYTDGVEDIKGFRAVAQYKIDKLMLGSIYQSSEI
ECCCCEEEEEEECCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VNPNLDNWQQRDGDGFIVSAKYQFDKLTLKAQYGQDDSGTGKIAGRVYDKLGAAATEVPE
CCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCEEHHHHHHHHCCHHCCCCC
VSQWAIGAEYRLSKSTRVHTELGQFDVKQYSDFDDTIMSVGFRLDF
CHHHCCCCEEEECCCCEEEHHHCCCCHHHHCCHHHHHHHCCEEECC
>Mature Secondary Structure
MMKIVKLTLLVAAVLASPSVMADAYKFYGRIDYSITHSDSGSATHSGKSGTVLENNWSRL
CCHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCEEECCCCEE
GIKGDAAINEDFTVFYQIEVGVNGATEGKQNNPFSARPTFLGIKHSTVGQLAAGRIDPVF
CEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCHHH
KMAKGTADAMDMYSLKHDRLFAGDKRWGDSLEYKTVKWNKLQFGASYILEDNYYGEDDVR
HHHCCCHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEEEECEEEEEECCCCCCCCCE
RDNGNYQVALTYGDKLFKSGDLYLAAAYTDGVEDIKGFRAVAQYKIDKLMLGSIYQSSEI
ECCCCEEEEEEECCHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
VNPNLDNWQQRDGDGFIVSAKYQFDKLTLKAQYGQDDSGTGKIAGRVYDKLGAAATEVPE
CCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCEEHHHHHHHHCCHHCCCCC
VSQWAIGAEYRLSKSTRVHTELGQFDVKQYSDFDDTIMSVGFRLDF
CHHHCCCCEEEECCCCEEEHHHCCCCHHHHCCHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA