Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623990

Identifier: 167623990

GI number: 167623990

Start: 2487015

End: 2488397

Strand: Direct

Name: 167623990

Synonym: Shal_2064

Alternate gene names: NA

Gene position: 2487015-2488397 (Clockwise)

Preceding gene: 167623986

Following gene: 167623991

Centisome position: 47.58

GC content: 42.08

Gene sequence:

>1383_bases
ATGAAAAAACACTTGAAGGCAGAGACAATGAAACGCTTAAAAAACTTCAATAAAACGCTGGTAAGTAGCGCAGTATTATT
CGCCACAATGACATTAGTCGGTTGTTCTGCAACGAGTTCTACCGCTATGGATCAAGGTAAGTACGCAGACGGCATTCATG
ACGTTTCAGCTAAAGGTAAGAAAGGGAAAATTATCTTAACGATAGAGGTCAAAAATGGTCATATTGTCGATATTAAGACC
AAATCTCATAATGAAACCGAATCTCTGTATCTAAACGCCGAGCGTTTACTTTCAAAAATAATCGCAAACAACGGTCACGA
AGGCATTGACGCCGTTTCGGGGGCAACTTTTTCCTCTAACGGTATTTTAGAAGCCGTTAACAGTGTCCCTCGCCGAAATG
GCAGTCAACCTGCCTATGCTGCCGTTGGCTCAAAGGAGCAATCTGGCGATGAAGATTTCAAGCTTAAGTGGTCAATTCAA
CCTCAGCTAGGTTTGCTTAAGGGGGATTATTACTATCAGGAAGCGCGATTCCGTCAAGGCCACATGGGAAGTGTCGCGAT
TGTCACCAATAGCAATAACGCCAAAGACGTGATTTTTGCAGAGTTTAATGAAAGTGGACGTCCGAATTACTACACCCGTC
TATATCAAGATGTCCCAAAGCGTATGTCTGAATATAACTTCTCAATGGGTAAGAAGAAAGGCACTGCCTGGGTACAATCA
TCTTTGACCATGGAAAAGCTTATGGTTGAGCAAGATAAGTTGACGTTCGACTTAAATCCTGATTTTGACCCATCGCTACG
CAATAAACTAAAAGAACCTAATCGTCTGAAATATGCCGATATCGATGTGGTTGCCGGTGCATCTAACAGTATCCAGCAAT
CTATGGTTCCGCTAACGGCAAAAATTCATGCTCAAATAAACGGCGATGGTACCAAGCAAAGATTCTATCAACATGCTGAA
AAGCTCAATGATGCTAAAGGCAACTGGACGGGGATTACTGCCATGCTGCGTATCGTTGTCGATACCGATACGAAGCAAAT
TGTGAAAGCCCACTATGATGAGATCTTTGCCGATGAGAAGGCCCAAATAAAAGACGCGTCTTTGAAGAAATTCTATCGCC
AGTCAAAATATGAATCTATTAACTATGTTGAGCCTGCACGAATTGGCTTCAATGTGATGATAGATGGTTTAAATGCTCAT
CTTCAACAAGGTGGATCGCTATTTTTAATCGATGACTTACCAGCAACAGGTGATACCGGAAGTTATGCAGCGACCGGTTT
CACTAAGCGCTCAAACTCTTGGGATAGCTATCTGAATCAAGCCGAGATCTTGTACAAAGAGATGCGTCAAGATGGAATGA
TTAACCAGCATAATAAAAACTAA

Upstream 100 bases:

>100_bases
CTGTAGTTTGTGTTAACTGCGTCAAATAAATAAAACTCAAACTAAGATATTGCGGTTTTCCGCAATTGTTAAGAATCTAA
AACCTTTTATTCTGGCTTCA

Downstream 100 bases:

>100_bases
CCCAGCTATAGATGTCGACTCCTAATCGCCTCTAGAGTGGGGAGTCGTCTGTCTTTCAAATGAATAAATAATTAAGAGAG
AAGATGATGAAAATAGTTAA

Product: FMN-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKKHLKAETMKRLKNFNKTLVSSAVLFATMTLVGCSATSSTAMDQGKYADGIHDVSAKGKKGKIILTIEVKNGHIVDIKT
KSHNETESLYLNAERLLSKIIANNGHEGIDAVSGATFSSNGILEAVNSVPRRNGSQPAYAAVGSKEQSGDEDFKLKWSIQ
PQLGLLKGDYYYQEARFRQGHMGSVAIVTNSNNAKDVIFAEFNESGRPNYYTRLYQDVPKRMSEYNFSMGKKKGTAWVQS
SLTMEKLMVEQDKLTFDLNPDFDPSLRNKLKEPNRLKYADIDVVAGASNSIQQSMVPLTAKIHAQINGDGTKQRFYQHAE
KLNDAKGNWTGITAMLRIVVDTDTKQIVKAHYDEIFADEKAQIKDASLKKFYRQSKYESINYVEPARIGFNVMIDGLNAH
LQQGGSLFLIDDLPATGDTGSYAATGFTKRSNSWDSYLNQAEILYKEMRQDGMINQHNKN

Sequences:

>Translated_460_residues
MKKHLKAETMKRLKNFNKTLVSSAVLFATMTLVGCSATSSTAMDQGKYADGIHDVSAKGKKGKIILTIEVKNGHIVDIKT
KSHNETESLYLNAERLLSKIIANNGHEGIDAVSGATFSSNGILEAVNSVPRRNGSQPAYAAVGSKEQSGDEDFKLKWSIQ
PQLGLLKGDYYYQEARFRQGHMGSVAIVTNSNNAKDVIFAEFNESGRPNYYTRLYQDVPKRMSEYNFSMGKKKGTAWVQS
SLTMEKLMVEQDKLTFDLNPDFDPSLRNKLKEPNRLKYADIDVVAGASNSIQQSMVPLTAKIHAQINGDGTKQRFYQHAE
KLNDAKGNWTGITAMLRIVVDTDTKQIVKAHYDEIFADEKAQIKDASLKKFYRQSKYESINYVEPARIGFNVMIDGLNAH
LQQGGSLFLIDDLPATGDTGSYAATGFTKRSNSWDSYLNQAEILYKEMRQDGMINQHNKN
>Mature_460_residues
MKKHLKAETMKRLKNFNKTLVSSAVLFATMTLVGCSATSSTAMDQGKYADGIHDVSAKGKKGKIILTIEVKNGHIVDIKT
KSHNETESLYLNAERLLSKIIANNGHEGIDAVSGATFSSNGILEAVNSVPRRNGSQPAYAAVGSKEQSGDEDFKLKWSIQ
PQLGLLKGDYYYQEARFRQGHMGSVAIVTNSNNAKDVIFAEFNESGRPNYYTRLYQDVPKRMSEYNFSMGKKKGTAWVQS
SLTMEKLMVEQDKLTFDLNPDFDPSLRNKLKEPNRLKYADIDVVAGASNSIQQSMVPLTAKIHAQINGDGTKQRFYQHAE
KLNDAKGNWTGITAMLRIVVDTDTKQIVKAHYDEIFADEKAQIKDASLKKFYRQSKYESINYVEPARIGFNVMIDGLNAH
LQQGGSLFLIDDLPATGDTGSYAATGFTKRSNSWDSYLNQAEILYKEMRQDGMINQHNKN

Specific function: Unknown

COG id: COG3976

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51335; Mature: 51335

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHLKAETMKRLKNFNKTLVSSAVLFATMTLVGCSATSSTAMDQGKYADGIHDVSAKGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHCCCCCC
KGKIILTIEVKNGHIVDIKTKSHNETESLYLNAERLLSKIIANNGHEGIDAVSGATFSSN
CCEEEEEEEECCCEEEEEEECCCCCCHHEEECHHHHHHHHHHCCCCCCCHHHCCCCCCCC
GILEAVNSVPRRNGSQPAYAAVGSKEQSGDEDFKLKWSIQPQLGLLKGDYYYQEARFRQG
CHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEECCHHHHHHHHCCC
HMGSVAIVTNSNNAKDVIFAEFNESGRPNYYTRLYQDVPKRMSEYNFSMGKKKGTAWVQS
CCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
SLTMEKLMVEQDKLTFDLNPDFDPSLRNKLKEPNRLKYADIDVVAGASNSIQQSMVPLTA
HHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCEEEECEEEEECCCCHHHHHHCCEEE
KIHAQINGDGTKQRFYQHAEKLNDAKGNWTGITAMLRIVVDTDTKQIVKAHYDEIFADEK
EEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHEEEEEEEECCCHHHHHHHHHHHHHCCCH
AQIKDASLKKFYRQSKYESINYVEPARIGFNVMIDGLNAHLQQGGSLFLIDDLPATGDTG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEEEECCCCCCCCC
SYAATGFTKRSNSWDSYLNQAEILYKEMRQDGMINQHNKN
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKKHLKAETMKRLKNFNKTLVSSAVLFATMTLVGCSATSSTAMDQGKYADGIHDVSAKGK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHCCCCCC
KGKIILTIEVKNGHIVDIKTKSHNETESLYLNAERLLSKIIANNGHEGIDAVSGATFSSN
CCEEEEEEEECCCEEEEEEECCCCCCHHEEECHHHHHHHHHHCCCCCCCHHHCCCCCCCC
GILEAVNSVPRRNGSQPAYAAVGSKEQSGDEDFKLKWSIQPQLGLLKGDYYYQEARFRQG
CHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCEEECCHHHHHHHHCCC
HMGSVAIVTNSNNAKDVIFAEFNESGRPNYYTRLYQDVPKRMSEYNFSMGKKKGTAWVQS
CCCEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
SLTMEKLMVEQDKLTFDLNPDFDPSLRNKLKEPNRLKYADIDVVAGASNSIQQSMVPLTA
HHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCEEEECEEEEECCCCHHHHHHCCEEE
KIHAQINGDGTKQRFYQHAEKLNDAKGNWTGITAMLRIVVDTDTKQIVKAHYDEIFADEK
EEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHEEEEEEEECCCHHHHHHHHHHHHHCCCH
AQIKDASLKKFYRQSKYESINYVEPARIGFNVMIDGLNAHLQQGGSLFLIDDLPATGDTG
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHCCCCEEEEECCCCCCCCC
SYAATGFTKRSNSWDSYLNQAEILYKEMRQDGMINQHNKN
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA