| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623986
Identifier: 167623986
GI number: 167623986
Start: 2482838
End: 2482996
Strand: Direct
Name: 167623986
Synonym: Shal_2060
Alternate gene names: NA
Gene position: 2482838-2482996 (Clockwise)
Preceding gene: 167623985
Following gene: 167623990
Centisome position: 47.5
GC content: 44.03
Gene sequence:
>159_bases TTGCAGGACGATATTAACTTTAAACTCATTGCCGGTAATCGTTATCCTCTATGGGTAAAAAGCCGCTATAGCGCCGGTCT AGTTTGCCAAGATAGAGGCTGGGAGTTTTGTGCAACTTGGGCAAAATCAAAACGTAGCCCAGACAGTAGAATTGCATAG
Upstream 100 bases:
>100_bases AGAGAGGGTTGCTATCGCTAGCACAGCGCCAAAACTGATCATCACGAGTCCAGTAAAAAATAGTTTTACAGTCGATGAGG TTAATTGGTCCACCAGCCAA
Downstream 100 bases:
>100_bases GGGCTAATCCCAATTAGTGTAAAGGGTTATTCGGTGCTTTTGCCCATTAAGAAAGCGAGTTCAGCAACATTACTGACCTG CATTTTTAGCATGACTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MQDDINFKLIAGNRYPLWVKSRYSAGLVCQDRGWEFCATWAKSKRSPDSRIA
Sequences:
>Translated_52_residues MQDDINFKLIAGNRYPLWVKSRYSAGLVCQDRGWEFCATWAKSKRSPDSRIA >Mature_52_residues MQDDINFKLIAGNRYPLWVKSRYSAGLVCQDRGWEFCATWAKSKRSPDSRIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6037; Mature: 6037
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDDINFKLIAGNRYPLWVKSRYSAGLVCQDRGWEFCATWAKSKRSPDSRIA CCCCCCEEEEECCCCCEEEECCCCCCEEECCCCCCEEEECHHCCCCCCCCCC >Mature Secondary Structure MQDDINFKLIAGNRYPLWVKSRYSAGLVCQDRGWEFCATWAKSKRSPDSRIA CCCCCCEEEEECCCCCEEEECCCCCCEEECCCCCCEEEECHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA