Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623983

Identifier: 167623983

GI number: 167623983

Start: 2479978

End: 2480310

Strand: Direct

Name: 167623983

Synonym: Shal_2057

Alternate gene names: NA

Gene position: 2479978-2480310 (Clockwise)

Preceding gene: 167623980

Following gene: 167623984

Centisome position: 47.45

GC content: 41.14

Gene sequence:

>333_bases
ATGCCACATTTAAGAATCAGCGGTTTATCAGAAGCGGCAGTTGCCACACTGAGTATCGGATTACTTGAGGCATTAGCCAA
GGTTTGTCAGGCAAAACCAGAATCTTTCATTCTCGATTGGGTAAACAGCAATAATTATCGTAATGGCGAACAGGTCAACG
ATATTGCTCAGGTCGAGGTGTTATGGTTTCCAAAAGATCCCGAAACACACCATCGTGCACAAAAGGTTATTCGTGAAGCC
TTATTAATGGCCAATCCCAAGCTACAGCATGTCATTGTTATGTTTAGACAGCTTGAACCAAGCACATATTATAAAGATGG
TCAGCATTATTAA

Upstream 100 bases:

>100_bases
ACCCACCTAAATCTGGCTCTAGAGACTGTTATTATCAGAAAAACCTTGCTCAAACTGACTTAAATCGGTAATTTCTATGC
CCTTATCTAGGAGGATCTTT

Downstream 100 bases:

>100_bases
GGAGAGAGCCTTGCTGAGTAAGCTAGGTGGCATACCGCTACAACCAGATTCGCTTTCTTGGCTGTTAACGCCTAAAGCGT
TAAAAGCTGAATTGTTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MPHLRISGLSEAAVATLSIGLLEALAKVCQAKPESFILDWVNSNNYRNGEQVNDIAQVEVLWFPKDPETHHRAQKVIREA
LLMANPKLQHVIVMFRQLEPSTYYKDGQHY

Sequences:

>Translated_110_residues
MPHLRISGLSEAAVATLSIGLLEALAKVCQAKPESFILDWVNSNNYRNGEQVNDIAQVEVLWFPKDPETHHRAQKVIREA
LLMANPKLQHVIVMFRQLEPSTYYKDGQHY
>Mature_109_residues
PHLRISGLSEAAVATLSIGLLEALAKVCQAKPESFILDWVNSNNYRNGEQVNDIAQVEVLWFPKDPETHHRAQKVIREAL
LMANPKLQHVIVMFRQLEPSTYYKDGQHY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12569; Mature: 12437

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHLRISGLSEAAVATLSIGLLEALAKVCQAKPESFILDWVNSNNYRNGEQVNDIAQVEV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHEEEEE
LWFPKDPETHHRAQKVIREALLMANPKLQHVIVMFRQLEPSTYYKDGQHY
EEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PHLRISGLSEAAVATLSIGLLEALAKVCQAKPESFILDWVNSNNYRNGEQVNDIAQVEV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHEEEEE
LWFPKDPETHHRAQKVIREALLMANPKLQHVIVMFRQLEPSTYYKDGQHY
EEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA