Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 167623980

GI number: 167623980

Start: 2476171

End: 2477931

Strand: Direct

Name: mmgC [H]

Synonym: Shal_2054

Alternate gene names: 167623980

Gene position: 2476171-2477931 (Clockwise)

Preceding gene: 167623978

Following gene: 167623983

Centisome position: 47.37

GC content: 46.96

Gene sequence:

>1761_bases
ATGAACCCGTATAACGCCCCGTTAGCTGAGATGCGTTTCTTGCTTGAAAAAGTTTTTGACGCCCCAAACATCTGGTCTGA
AATGCCTGCAATGGCAGAGTCTGTCGATATGGATACTGCAGTGGCCATTTTAGATGAAGCAGACAAGATTAGCCGAGAGC
TGATCCATCCTATTAACCGAAGTGGCGATGAGCAAGGCGTTCGTCATGAAGCTGATAAGGTGATCACACCCGATGGCTAT
AAAGCGGTATATGATCAATACGCAGAAGGTGGCTGGGTCGGGTTATGTGGTGATCCTGAATTTGGCGGGATGGGCATGCC
TAAGATGCTCGGTGTACTTGTCGATGAGATGGCATACAGCGCCTGTAATGCATTTACACTTTACGGTTCATTAACTGCTG
GTGCGGCATTAGCCATTCATGCCCATGGTAGCGATGCGCTCAAAGAGCAGTACCTGCCGATGATGTACAGCGGCGAGTGG
GCTGGTGCCATGGGGATGACAGAACCTCAAGCGGGCTCAGATCTTCGCAATATCCGCACTAAGGCTGTGCCTAATGATGA
TGGTAGTTATAAGATCACTGGCAGCAAGATTTTTATCACTGGTGGCGATCATGATTTAACTGAAAACGTGATCCATTTAG
TATTAGCCAAGTTACCTAATACCAGTGGTATTTCGCTGTTTTTAGTTCCAAAAATTAAGGTTGATGCTGACAATAGCCTA
GGCGATGCCAACGGTGTCACAGTGGGCTCTATCGAACATAAGATGGGGCTCAAAGGCTCATCGACTTGTGTGATGAACTT
TGACGATGCAGAAGGTTACCTGATAGGTAGGGCGAATCGCGGTCTGGTATGTATGTTCACCATGATGAACTATGAGCGCT
TAGCCATTGGTATTCAAGGCTTAGGAACCTCACAAGCGGCATATCAAATGGCGGCTGACTATGCCAAGGAACGCGTTCAG
GGCGTGGCTGCGGGTGGTTCACCTACAGGAGCAAGTATTGATCCTATTTTAGTTCATGGCGATGTTAGGCGTATGCTACT
GACCATACGAGCCTTGACCGAAGCTGGACGCGCATTATCAGTATATACGGGACTGCAACTCGATTTGGCCAAGTACTCAG
AAGATAGTGATACCAAGGCCAAGGCGAGTCGTTATATGGGGCTGTTAACACCGGTCTCTAAGGCATTCTTAAGTGATCGT
GGTCTCGATGCGGCAATTATGGCGCAGCAAGTATTTGGCGGTCATGGCTATATTCGAGAGACAGGCATTGAGCAGTTAGT
GCGTGATACTCGAATTGCACAGATCTATGAAGGGACAAATGGCATTCAGGCGATTGACTTCTTAGGCCGTAAAGTCACGG
GGGATAACGTCGCAGCCCTGTCTGAGTTTGTTGCAGAGCAGGTCGCCAATATTAATGGCTATACTCATGTTGCCGATGGC
GATAAAGCAAAACTATTGTCATTGCTGGAACAGCTGCTTGAAGTTGCTAACCAAGTTAATGACAATAAACTCAGTCGACC
CGCATTGATCAACTCATGCGCAGTTGATTATCTTGATGCTTTTGGTTATGTCCTTTATGGCTGCTTCTGGTTAGCGATGA
ATGATGCGGCTAATGACCACGAAGATGAAAGCTTTAAGCAACAAAAAGCGCATCTTGGTCGTTTTTACTTTGATAAGCTA
TTAGCTAAAGCGGATTATCACCTATCCCAGGTTAGTCAAGGTGATGCATCGATAATGCAGATGGATGCGAGCCTGTTCTA
A

Upstream 100 bases:

>100_bases
ACGGACCCGCTAAAAGATTTCGTACCAAAAATGGTGCCTTTTGTGACAACATCTGATAGATTTGAAACAACTGTTTAAAT
CTAATGTTTAAGAGTCCTAT

Downstream 100 bases:

>100_bases
TCCCTATCTATGGGTCAAACCTTAAAAAACGCCACTTTCATAGTGGCGCTTTTAGTTTCAGTCTTAAACACGCTAGTTGC
AACGGGCTTAGTTGGTGATA

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MNPYNAPLAEMRFLLEKVFDAPNIWSEMPAMAESVDMDTAVAILDEADKISRELIHPINRSGDEQGVRHEADKVITPDGY
KAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAYSACNAFTLYGSLTAGAALAIHAHGSDALKEQYLPMMYSGEW
AGAMGMTEPQAGSDLRNIRTKAVPNDDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTSGISLFLVPKIKVDADNSL
GDANGVTVGSIEHKMGLKGSSTCVMNFDDAEGYLIGRANRGLVCMFTMMNYERLAIGIQGLGTSQAAYQMAADYAKERVQ
GVAAGGSPTGASIDPILVHGDVRRMLLTIRALTEAGRALSVYTGLQLDLAKYSEDSDTKAKASRYMGLLTPVSKAFLSDR
GLDAAIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNVAALSEFVAEQVANINGYTHVADG
DKAKLLSLLEQLLEVANQVNDNKLSRPALINSCAVDYLDAFGYVLYGCFWLAMNDAANDHEDESFKQQKAHLGRFYFDKL
LAKADYHLSQVSQGDASIMQMDASLF

Sequences:

>Translated_586_residues
MNPYNAPLAEMRFLLEKVFDAPNIWSEMPAMAESVDMDTAVAILDEADKISRELIHPINRSGDEQGVRHEADKVITPDGY
KAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAYSACNAFTLYGSLTAGAALAIHAHGSDALKEQYLPMMYSGEW
AGAMGMTEPQAGSDLRNIRTKAVPNDDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTSGISLFLVPKIKVDADNSL
GDANGVTVGSIEHKMGLKGSSTCVMNFDDAEGYLIGRANRGLVCMFTMMNYERLAIGIQGLGTSQAAYQMAADYAKERVQ
GVAAGGSPTGASIDPILVHGDVRRMLLTIRALTEAGRALSVYTGLQLDLAKYSEDSDTKAKASRYMGLLTPVSKAFLSDR
GLDAAIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNVAALSEFVAEQVANINGYTHVADG
DKAKLLSLLEQLLEVANQVNDNKLSRPALINSCAVDYLDAFGYVLYGCFWLAMNDAANDHEDESFKQQKAHLGRFYFDKL
LAKADYHLSQVSQGDASIMQMDASLF
>Mature_586_residues
MNPYNAPLAEMRFLLEKVFDAPNIWSEMPAMAESVDMDTAVAILDEADKISRELIHPINRSGDEQGVRHEADKVITPDGY
KAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAYSACNAFTLYGSLTAGAALAIHAHGSDALKEQYLPMMYSGEW
AGAMGMTEPQAGSDLRNIRTKAVPNDDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTSGISLFLVPKIKVDADNSL
GDANGVTVGSIEHKMGLKGSSTCVMNFDDAEGYLIGRANRGLVCMFTMMNYERLAIGIQGLGTSQAAYQMAADYAKERVQ
GVAAGGSPTGASIDPILVHGDVRRMLLTIRALTEAGRALSVYTGLQLDLAKYSEDSDTKAKASRYMGLLTPVSKAFLSDR
GLDAAIMAQQVFGGHGYIRETGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNVAALSEFVAEQVANINGYTHVADG
DKAKLLSLLEQLLEVANQVNDNKLSRPALINSCAVDYLDAFGYVLYGCFWLAMNDAANDHEDESFKQQKAHLGRFYFDKL
LAKADYHLSQVSQGDASIMQMDASLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557235, Length=425, Percent_Identity=27.7647058823529, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI76496475, Length=425, Percent_Identity=27.7647058823529, Blast_Score=113, Evalue=5e-25,
Organism=Homo sapiens, GI4501857, Length=437, Percent_Identity=27.2311212814645, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI226958412, Length=392, Percent_Identity=26.7857142857143, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI226958414, Length=377, Percent_Identity=27.3209549071618, Blast_Score=109, Evalue=9e-24,
Organism=Homo sapiens, GI4501859, Length=415, Percent_Identity=26.7469879518072, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI21361497, Length=368, Percent_Identity=27.445652173913, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI7656849, Length=368, Percent_Identity=25, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI4557233, Length=439, Percent_Identity=25.9681093394077, Blast_Score=93, Evalue=8e-19,
Organism=Homo sapiens, GI4557231, Length=357, Percent_Identity=27.7310924369748, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI187960098, Length=357, Percent_Identity=27.7310924369748, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI4503943, Length=321, Percent_Identity=28.0373831775701, Blast_Score=77, Evalue=6e-14,
Organism=Escherichia coli, GI87082384, Length=285, Percent_Identity=29.4736842105263, Blast_Score=117, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17538396, Length=406, Percent_Identity=26.8472906403941, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI71985184, Length=420, Percent_Identity=28.0952380952381, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17569725, Length=394, Percent_Identity=30.2030456852792, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17534899, Length=366, Percent_Identity=28.1420765027322, Blast_Score=107, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI86563383, Length=364, Percent_Identity=27.1978021978022, Blast_Score=104, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI86563381, Length=364, Percent_Identity=27.1978021978022, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17533517, Length=407, Percent_Identity=25.7985257985258, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17508101, Length=410, Percent_Identity=26.3414634146341, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=363, Percent_Identity=27.2727272727273, Blast_Score=95, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI71985192, Length=258, Percent_Identity=31.0077519379845, Blast_Score=92, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=406, Percent_Identity=25.1231527093596, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17505929, Length=431, Percent_Identity=28.3062645011601, Blast_Score=82, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=184, Percent_Identity=30.4347826086957, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17534353, Length=324, Percent_Identity=25.9259259259259, Blast_Score=77, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17551932, Length=312, Percent_Identity=25.3205128205128, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI32563615, Length=228, Percent_Identity=26.7543859649123, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355753, Length=452, Percent_Identity=26.5486725663717, Blast_Score=120, Evalue=3e-27,
Organism=Drosophila melanogaster, GI281363737, Length=416, Percent_Identity=26.4423076923077, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=26.063829787234, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24666513, Length=409, Percent_Identity=27.8728606356968, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646207, Length=329, Percent_Identity=27.0516717325228, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24660351, Length=387, Percent_Identity=27.906976744186, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI19920834, Length=338, Percent_Identity=27.5147928994083, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 63356; Mature: 63356

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00039 DEAD_ATP_HELICASE ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPYNAPLAEMRFLLEKVFDAPNIWSEMPAMAESVDMDTAVAILDEADKISRELIHPINR
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
SGDEQGVRHEADKVITPDGYKAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAYS
CCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
ACNAFTLYGSLTAGAALAIHAHGSDALKEQYLPMMYSGEWAGAMGMTEPQAGSDLRNIRT
HHCCEEEEECCCCCCEEEEEECCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHH
KAVPNDDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTSGISLFLVPKIKVDADNSL
HCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCC
GDANGVTVGSIEHKMGLKGSSTCVMNFDDAEGYLIGRANRGLVCMFTMMNYERLAIGIQG
CCCCCEEEECCHHHCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEHHCCEEEEEEECC
LGTSQAAYQMAADYAKERVQGVAAGGSPTGASIDPILVHGDVRRMLLTIRALTEAGRALS
CCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEE
VYTGLQLDLAKYSEDSDTKAKASRYMGLLTPVSKAFLSDRGLDAAIMAQQVFGGHGYIRE
EECCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHH
TGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNVAALSEFVAEQVANINGYTHVADG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC
DKAKLLSLLEQLLEVANQVNDNKLSRPALINSCAVDYLDAFGYVLYGCFWLAMNDAANDH
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EDESFKQQKAHLGRFYFDKLLAKADYHLSQVSQGDASIMQMDASLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNPYNAPLAEMRFLLEKVFDAPNIWSEMPAMAESVDMDTAVAILDEADKISRELIHPINR
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
SGDEQGVRHEADKVITPDGYKAVYDQYAEGGWVGLCGDPEFGGMGMPKMLGVLVDEMAYS
CCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHH
ACNAFTLYGSLTAGAALAIHAHGSDALKEQYLPMMYSGEWAGAMGMTEPQAGSDLRNIRT
HHCCEEEEECCCCCCEEEEEECCCHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHH
KAVPNDDGSYKITGSKIFITGGDHDLTENVIHLVLAKLPNTSGISLFLVPKIKVDADNSL
HCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCC
GDANGVTVGSIEHKMGLKGSSTCVMNFDDAEGYLIGRANRGLVCMFTMMNYERLAIGIQG
CCCCCEEEECCHHHCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEHHCCEEEEEEECC
LGTSQAAYQMAADYAKERVQGVAAGGSPTGASIDPILVHGDVRRMLLTIRALTEAGRALS
CCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEE
VYTGLQLDLAKYSEDSDTKAKASRYMGLLTPVSKAFLSDRGLDAAIMAQQVFGGHGYIRE
EECCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHH
TGIEQLVRDTRIAQIYEGTNGIQAIDFLGRKVTGDNVAALSEFVAEQVANINGYTHVADG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC
DKAKLLSLLEQLLEVANQVNDNKLSRPALINSCAVDYLDAFGYVLYGCFWLAMNDAANDH
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EDESFKQQKAHLGRFYFDKLLAKADYHLSQVSQGDASIMQMDASLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]