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The map label for this gene is ydiK [C]

Identifier: 167623922

GI number: 167623922

Start: 2402804

End: 2403886

Strand: Reverse

Name: ydiK [C]

Synonym: Shal_1993

Alternate gene names: 167623922

Gene position: 2403886-2402804 (Counterclockwise)

Preceding gene: 167623924

Following gene: 167623920

Centisome position: 45.99

GC content: 43.49

Gene sequence:

>1083_bases
ATGAGTAGTCTTAAACTCAAACCGCACCACTTAGCCTTACTATTCGCCTTAGCGGTCGCCTTCTATGTCTGTTATTTACT
CATATCCCCTTATTTAGGCTCGATAGTACTGGGGTTTATTGTCTCGATATTATTTCTACCGATCCACACTCGAATACAAC
ACCGTATGCCAAATAGCCCCAATATGGCCTCAGTCTTTTCGTGTACATTGGTGACCGTGATGGTGTTGATCCCACTACTG
TTTGTGGCGATGGCAATTATGAATGAAGGCATCAACTTCATGACTAATGCCTATGAGTGGCTTACTGGCGGCGGAGCAAA
AAGTTTTCTTGCTCATCCCTATATTCAAAGTGGTGTTGCCTTATTAAATAAGTGGCTGCCATTTGACAGCATTAAGATAG
ATGAGCTAGTACAACAAGCTGCAGGAAAAGTAACACAACTGAGTACCAGCTTTTTAAGTGCCAGTACAGGCATTGCTGGC
GATGTCGCCGATACCTTTTTAGATTTTGGATTGATGCTATTTGTGTTGTTTTTCTTTTTGCGAGATCAGGAGAAAATCAT
CGATAACACCCGCCACATCATTCCACTATCTCGCTCGCAGCAAGGGCTTATCTTCAATGAAGTAGGGGTTGTTGCTAAGT
CTGCCGTATTGGGGGCATTTCTTACTGCATTAGCCCAAGGGGTCCTAGGTGGAATAGCGATGTCATTAGCAGGATTTTCA
GGCTTATTTTGGGGCAGCATGATGGCATTTGCGTCATTTATCCCATTTGTAGGCACCGCTATGATTTGGCTGCCAGCTTC
GATTTACTTATTTATAACTGGTGACTGGCAATGGGCGATATTTATGATGGTTTGGGGAGTCGTCGTGGTTGGCTCGATTG
ATAACTTTCTCAGACCTTGGCTGATGCAAGGCAATACAGGTATGAGCACCCTGCTGCTGTTTTTCTCTCTGCTTGGTGGT
TTACAGCTGTTTGGTCTCATAGGCCTGATCTATGGCCCAATTATTTTTGCGGTAACTCTAGTGTTGGCTCGGTTATATGA
GATTGAGTTTAAGGACTTTATAGAACAACAAGATAAAGAGTAA

Upstream 100 bases:

>100_bases
CTTGCTGCAATTATTAACTTATATTACTAGTGATAGAGTAAGCGGGCGTGATTATTCACTCTCTGACAGCCACCTTGCTT
TTATTTTGGAGTTTTTTTGT

Downstream 100 bases:

>100_bases
TGCTTTAGCGCTGAGTGTAACAAGGACTATTTTAACCCTCTAAAAAAACATGCCCCTTAACACTAAGGGGCCCGTTTTGC
TGACCACTAAAGCTCTTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MSSLKLKPHHLALLFALAVAFYVCYLLISPYLGSIVLGFIVSILFLPIHTRIQHRMPNSPNMASVFSCTLVTVMVLIPLL
FVAMAIMNEGINFMTNAYEWLTGGGAKSFLAHPYIQSGVALLNKWLPFDSIKIDELVQQAAGKVTQLSTSFLSASTGIAG
DVADTFLDFGLMLFVLFFFLRDQEKIIDNTRHIIPLSRSQQGLIFNEVGVVAKSAVLGAFLTALAQGVLGGIAMSLAGFS
GLFWGSMMAFASFIPFVGTAMIWLPASIYLFITGDWQWAIFMMVWGVVVVGSIDNFLRPWLMQGNTGMSTLLLFFSLLGG
LQLFGLIGLIYGPIIFAVTLVLARLYEIEFKDFIEQQDKE

Sequences:

>Translated_360_residues
MSSLKLKPHHLALLFALAVAFYVCYLLISPYLGSIVLGFIVSILFLPIHTRIQHRMPNSPNMASVFSCTLVTVMVLIPLL
FVAMAIMNEGINFMTNAYEWLTGGGAKSFLAHPYIQSGVALLNKWLPFDSIKIDELVQQAAGKVTQLSTSFLSASTGIAG
DVADTFLDFGLMLFVLFFFLRDQEKIIDNTRHIIPLSRSQQGLIFNEVGVVAKSAVLGAFLTALAQGVLGGIAMSLAGFS
GLFWGSMMAFASFIPFVGTAMIWLPASIYLFITGDWQWAIFMMVWGVVVVGSIDNFLRPWLMQGNTGMSTLLLFFSLLGG
LQLFGLIGLIYGPIIFAVTLVLARLYEIEFKDFIEQQDKE
>Mature_359_residues
SSLKLKPHHLALLFALAVAFYVCYLLISPYLGSIVLGFIVSILFLPIHTRIQHRMPNSPNMASVFSCTLVTVMVLIPLLF
VAMAIMNEGINFMTNAYEWLTGGGAKSFLAHPYIQSGVALLNKWLPFDSIKIDELVQQAAGKVTQLSTSFLSASTGIAGD
VADTFLDFGLMLFVLFFFLRDQEKIIDNTRHIIPLSRSQQGLIFNEVGVVAKSAVLGAFLTALAQGVLGGIAMSLAGFSG
LFWGSMMAFASFIPFVGTAMIWLPASIYLFITGDWQWAIFMMVWGVVVVGSIDNFLRPWLMQGNTGMSTLLLFFSLLGGL
QLFGLIGLIYGPIIFAVTLVLARLYEIEFKDFIEQQDKE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=363, Percent_Identity=25.068870523416, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39617; Mature: 39485

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLKLKPHHLALLFALAVAFYVCYLLISPYLGSIVLGFIVSILFLPIHTRIQHRMPNSP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NMASVFSCTLVTVMVLIPLLFVAMAIMNEGINFMTNAYEWLTGGGAKSFLAHPYIQSGVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLNKWLPFDSIKIDELVQQAAGKVTQLSTSFLSASTGIAGDVADTFLDFGLMLFVLFFFL
HHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RDQEKIIDNTRHIIPLSRSQQGLIFNEVGVVAKSAVLGAFLTALAQGVLGGIAMSLAGFS
CCHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFWGSMMAFASFIPFVGTAMIWLPASIYLFITGDWQWAIFMMVWGVVVVGSIDNFLRPW
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
LMQGNTGMSTLLLFFSLLGGLQLFGLIGLIYGPIIFAVTLVLARLYEIEFKDFIEQQDKE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSLKLKPHHLALLFALAVAFYVCYLLISPYLGSIVLGFIVSILFLPIHTRIQHRMPNSP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NMASVFSCTLVTVMVLIPLLFVAMAIMNEGINFMTNAYEWLTGGGAKSFLAHPYIQSGVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLNKWLPFDSIKIDELVQQAAGKVTQLSTSFLSASTGIAGDVADTFLDFGLMLFVLFFFL
HHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RDQEKIIDNTRHIIPLSRSQQGLIFNEVGVVAKSAVLGAFLTALAQGVLGGIAMSLAGFS
CCHHHHHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLFWGSMMAFASFIPFVGTAMIWLPASIYLFITGDWQWAIFMMVWGVVVVGSIDNFLRPW
HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
LMQGNTGMSTLLLFFSLLGGLQLFGLIGLIYGPIIFAVTLVLARLYEIEFKDFIEQQDKE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]