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The map label for this gene is 167623924

Identifier: 167623924

GI number: 167623924

Start: 2409470

End: 2410288

Strand: Reverse

Name: 167623924

Synonym: Shal_1998

Alternate gene names: NA

Gene position: 2410288-2409470 (Counterclockwise)

Preceding gene: 167623926

Following gene: 167623922

Centisome position: 46.11

GC content: 43.1

Gene sequence:

>819_bases
ATGATCCCCGCTCAACATGTCACCCCATTTGTTCGTGGCAATAAGAATGACTGTAACGATGCTCTCGCTATTTTTGAGGC
AAGCTCAAGACCTAATATTCGCTTTGTCCCTGTAAAAACAGAGGGGCAACAAGAAGTCATGATGATGCATCGGATTAGAG
AGCGTTTAATCAAACAACGTGTTGCTATCACCAATCAAACTCGAGGTCTGTTAGTTGATTTTGGCATTATTTTTCAACAA
GGATTTACAGCCTTTGAACAAAACATGTGGCAGATTATTAATGATAGTGAACAAAGGCCAGTACTGAAGTTCCTCATTAA
CCAAGCCTATGATGAATACCTATACGTAAGCCGACAGCTTAAAGAGCTCAATAAACTAATCAGGAAAAAATTGGAGCAAA
CTCCATCAGGAAAGATTTTGCTCAGTATGTCAGGTATCGGTCACGTGATAGCCTCTGCTTTTGAAGCCAGCATCGATAAG
GCACAAGCCTTTAACACCCCCAAAGAACTTGCCGTGTGGCTTGGTCTCACCCCAAAACAATATGCCTCAGGTAACAAGAG
CAAGCTTTATGGGATCACCAAGCGCGGTGACGGCTATTTACGAAAGCAGTTAATACATGGTGCTAGAACGGTTGTTTGCC
ATTCCCACAAAAAAGACGATGTGCTTAACCGATGGATAAACCAGCTTAAAGAACGGGTATGCTTTAACAAAGCTGTTGTG
GCCACTGCACATAAGCTCGCTCGGTTGATGTGGGTGTTACTCTGGAAACAAGCTATGTATCAGGCTCTGCAAGGGCTAGA
AACAAAGGCAATACCATGA

Upstream 100 bases:

>100_bases
TTTCTTGGTGTCGGCATAACCCTCTCCACTCAATAGCTTTACTTAAGCCTAGTCAATAAAGTTACCGATAACAATTCTGG
GTGTCTTGGTTACTCTTAAG

Downstream 100 bases:

>100_bases
GACTAACAGTATTGTATGTTATCGACTATCAAGTAAAGCTCGCTCAAGACAAGGGTCAATACGGAGCCCAACTGGGTGTT
CGCTATTTTAGGGTGTGTAG

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MIPAQHVTPFVRGNKNDCNDALAIFEASSRPNIRFVPVKTEGQQEVMMMHRIRERLIKQRVAITNQTRGLLVDFGIIFQQ
GFTAFEQNMWQIINDSEQRPVLKFLINQAYDEYLYVSRQLKELNKLIRKKLEQTPSGKILLSMSGIGHVIASAFEASIDK
AQAFNTPKELAVWLGLTPKQYASGNKSKLYGITKRGDGYLRKQLIHGARTVVCHSHKKDDVLNRWINQLKERVCFNKAVV
ATAHKLARLMWVLLWKQAMYQALQGLETKAIP

Sequences:

>Translated_272_residues
MIPAQHVTPFVRGNKNDCNDALAIFEASSRPNIRFVPVKTEGQQEVMMMHRIRERLIKQRVAITNQTRGLLVDFGIIFQQ
GFTAFEQNMWQIINDSEQRPVLKFLINQAYDEYLYVSRQLKELNKLIRKKLEQTPSGKILLSMSGIGHVIASAFEASIDK
AQAFNTPKELAVWLGLTPKQYASGNKSKLYGITKRGDGYLRKQLIHGARTVVCHSHKKDDVLNRWINQLKERVCFNKAVV
ATAHKLARLMWVLLWKQAMYQALQGLETKAIP
>Mature_272_residues
MIPAQHVTPFVRGNKNDCNDALAIFEASSRPNIRFVPVKTEGQQEVMMMHRIRERLIKQRVAITNQTRGLLVDFGIIFQQ
GFTAFEQNMWQIINDSEQRPVLKFLINQAYDEYLYVSRQLKELNKLIRKKLEQTPSGKILLSMSGIGHVIASAFEASIDK
AQAFNTPKELAVWLGLTPKQYASGNKSKLYGITKRGDGYLRKQLIHGARTVVCHSHKKDDVLNRWINQLKERVCFNKAVV
ATAHKLARLMWVLLWKQAMYQALQGLETKAIP

Specific function: Required for the transposition of an insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 31162; Mature: 31162

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPAQHVTPFVRGNKNDCNDALAIFEASSRPNIRFVPVKTEGQQEVMMMHRIRERLIKQR
CCCCHHCCHHHCCCCCCHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
VAITNQTRGLLVDFGIIFQQGFTAFEQNMWQIINDSEQRPVLKFLINQAYDEYLYVSRQL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
KELNKLIRKKLEQTPSGKILLSMSGIGHVIASAFEASIDKAQAFNTPKELAVWLGLTPKQ
HHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH
YASGNKSKLYGITKRGDGYLRKQLIHGARTVVCHSHKKDDVLNRWINQLKERVCFNKAVV
HHCCCCCCEEEEECCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
ATAHKLARLMWVLLWKQAMYQALQGLETKAIP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIPAQHVTPFVRGNKNDCNDALAIFEASSRPNIRFVPVKTEGQQEVMMMHRIRERLIKQR
CCCCHHCCHHHCCCCCCHHHHHHHEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
VAITNQTRGLLVDFGIIFQQGFTAFEQNMWQIINDSEQRPVLKFLINQAYDEYLYVSRQL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
KELNKLIRKKLEQTPSGKILLSMSGIGHVIASAFEASIDKAQAFNTPKELAVWLGLTPKQ
HHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH
YASGNKSKLYGITKRGDGYLRKQLIHGARTVVCHSHKKDDVLNRWINQLKERVCFNKAVV
HHCCCCCCEEEEECCCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
ATAHKLARLMWVLLWKQAMYQALQGLETKAIP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]