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The map label for this gene is uidR [C]

Identifier: 167623902

GI number: 167623902

Start: 2373647

End: 2374240

Strand: Reverse

Name: uidR [C]

Synonym: Shal_1973

Alternate gene names: 167623902

Gene position: 2374240-2373647 (Counterclockwise)

Preceding gene: 167623905

Following gene: 167623901

Centisome position: 45.42

GC content: 44.28

Gene sequence:

>594_bases
ATGACACGCTCAGAGCAGAAACGTCTGGCCATTATTAATGCCGCCAAAGAAGAGTTCATTCATCATGGATTTATCGCGGC
GAACATGGATAGGATCTGCACGACGGCAGAGGTCTCAAAGCGCACGCTATACCGGCATTATGAGAGCAAAGAAAAGTTAT
TTGAATCGGTGTTGACCATCATTCAAGCTTCGATTGATGAAACGTTAACTTATCCATTCAATCCTGAACTCAGTCTATAT
GAGCAGTTGAAAGCCATAACTTACCTAGAGGTAGATACTCTCTACAATATCTGTGGCATGGCACTAGCACGTACCATTTT
GCTGGAATTTTTACGCCAACCCGATATGGCGCGAAAATTGGTGACCACCATCTATAGCACCAAAGCTGTGACACACTGGT
TTAGCGCCGCAATGGATTCTGGAAAACTGAAGCAGACGGATCTTAGAATCATCACCAATGTTTACACTAGCTTGTTCCAA
GGGGAGTTGTTTTGGCCGCAAGTGATAAGGCAATCGCCTATCCCTGAAGGGAAAGAGTTAGAAGAGAAAGTAGAAACCGT
TGTGATGGTGGTATTAAGGGCATTTGAAGCCTAA

Upstream 100 bases:

>100_bases
GAGTTTATCTTATTCCGGTTTCAGACAAAGGTAAACTTGAAAGTGTACTTTTGCGATCTCGCTTGCTAAAATCATCAATG
TTAAAAACGGGAGAGAAAAG

Downstream 100 bases:

>100_bases
TGTGCAAACATACCGCCTAATAATAGCAGGAGACGTTAGGCCAGTAGCACGTAATCGCCACCCCATCAAACATCCGGCAA
ATCTATGGATTCTCTGCGGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MTRSEQKRLAIINAAKEEFIHHGFIAANMDRICTTAEVSKRTLYRHYESKEKLFESVLTIIQASIDETLTYPFNPELSLY
EQLKAITYLEVDTLYNICGMALARTILLEFLRQPDMARKLVTTIYSTKAVTHWFSAAMDSGKLKQTDLRIITNVYTSLFQ
GELFWPQVIRQSPIPEGKELEEKVETVVMVVLRAFEA

Sequences:

>Translated_197_residues
MTRSEQKRLAIINAAKEEFIHHGFIAANMDRICTTAEVSKRTLYRHYESKEKLFESVLTIIQASIDETLTYPFNPELSLY
EQLKAITYLEVDTLYNICGMALARTILLEFLRQPDMARKLVTTIYSTKAVTHWFSAAMDSGKLKQTDLRIITNVYTSLFQ
GELFWPQVIRQSPIPEGKELEEKVETVVMVVLRAFEA
>Mature_196_residues
TRSEQKRLAIINAAKEEFIHHGFIAANMDRICTTAEVSKRTLYRHYESKEKLFESVLTIIQASIDETLTYPFNPELSLYE
QLKAITYLEVDTLYNICGMALARTILLEFLRQPDMARKLVTTIYSTKAVTHWFSAAMDSGKLKQTDLRIITNVYTSLFQG
ELFWPQVIRQSPIPEGKELEEKVETVVMVVLRAFEA

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22718; Mature: 22586

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSEQKRLAIINAAKEEFIHHGFIAANMDRICTTAEVSKRTLYRHYESKEKLFESVLTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQASIDETLTYPFNPELSLYEQLKAITYLEVDTLYNICGMALARTILLEFLRQPDMARKL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VTTIYSTKAVTHWFSAAMDSGKLKQTDLRIITNVYTSLFQGELFWPQVIRQSPIPEGKEL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH
EEKVETVVMVVLRAFEA
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRSEQKRLAIINAAKEEFIHHGFIAANMDRICTTAEVSKRTLYRHYESKEKLFESVLTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQASIDETLTYPFNPELSLYEQLKAITYLEVDTLYNICGMALARTILLEFLRQPDMARKL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VTTIYSTKAVTHWFSAAMDSGKLKQTDLRIITNVYTSLFQGELFWPQVIRQSPIPEGKEL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH
EEKVETVVMVVLRAFEA
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA