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The map label for this gene is 167623905

Identifier: 167623905

GI number: 167623905

Start: 2378728

End: 2381013

Strand: Reverse

Name: 167623905

Synonym: Shal_1976

Alternate gene names: NA

Gene position: 2381013-2378728 (Counterclockwise)

Preceding gene: 167623906

Following gene: 167623902

Centisome position: 45.55

GC content: 44.93

Gene sequence:

>2286_bases
ATGAACGATGAGATAGGTTTAAAAACATCCTCAGGCGAAGATGTTGCTTTAAAGGCGGTTAATGTTAAGGCTGTACTCAA
TGGCGTGTTATCACAAGTAAACATAGAACAGACCTATATTAATGCCGAAAACACCAATATAGAGGCGGTTTATACTTTCC
CGCTGCCGTTAGATGCGGTGTTATTAGAGCTGGTTGTAGAGATAAACGGCGAGACACTCACAGGCCAAGTTAAACCAAGA
GCGATTGCAGAAACGCAGTATGAAGAGGCTATCACAGAGGGTGACACCGCTGTATTACTAACAAAAATTAAAGACGGTTT
ATATTGCGTCAATTTGGGTAACTTGCTTGCGGGCGAGAGTGCAATAATCAAATTCAAATATGCGCAGATCCATCAGTGGC
AGGGAGATTCATTACGATTCTATCTACCAACCACCCTAGCCCCTCGATACGGCAACCCGATAGATTACAGATTAGAGCCA
CATCAAGTACCGGAGCATAAGTTATTAGCCCCTTATGCTCTGAACTTTGAGTTAACCATTCAGGGACAACTCGCTAGCGC
AGCATTAAATAGTCCGACTCATGCAATAACCAAGCACTATGACAATGAGTCTTTAAAAGTCAGCCTCAACAATCAAACCG
CCGCAATGGATCGTGACTTAATCGTCGAGTTCACCCAGCCAAAGTACTATGCAGGTGAAGGACTGTGGAGCAAAGATGAC
GATAAGGTTGTTGCGCTGACCTCGTTCTACCCTCAAATCGACTTGCCACAGACTACCAGCTCACGCTGTATAAAAATGGT
TGTCGATTGCTCAGGCTCTATGTTGGGTGACTCAATCACACAGGCCGGCATAGCACTAAAGCAGATCCTTAAGCTATTAA
ACGAAGATGATTGGTTTAACATCATACTGTTTGGTAGTCATCATAAGAGTTTGTTCTCTGAGTCTGTAAAAGCAAATAGA
GCTAATCTCGACATTGCAGCCAAAGAACTTGCTAACTTAAACGCTGATTTAGGTGGCACCGAGATGTTAAGTGCGCTGAA
CGCTGCGTATGACTCAGCTGCTCCAGCGGAGCTTGCATCTAACATACTGTTGATCACCGACGGTGAGATTTGGGGAGAAG
AGCAACTGATCTGCAAAGCACAGGAATCTAATCATCGTCACTTTGTCGTTGGAGTCGGCAGCGCTGTAAGTGAAGCTTTT
TTAAAACAGCTAGCTGATAAAACCGGTGGGGCCAGCGAGTTTGTCACGCCCAATGAAAATATGAGCAGTAGAATTGTGCA
GCACTTCTGCCGCATTAAACAGTCTAAATTGACCCAGAGTGATATTCGCTTTGGTGAAGAATCGAATAACGACAAAACCC
TGTCACAATCGTTAAGCCAACAAACGACGATATTTGCAGGAGATACAGTAAACAGTTTCGCGCAATTAGAGCAGCTTACA
ACTAAGCAAGCGACATTATCTTTTGCGTATAATCGCGCTTCAAACACTGAGCAAGGCGAGAGCGACAAGCAAAGCCAAAG
CTACAAGCAAAGTATAGAATTACAGGAATATACCGATAGCCTTAACACGTTAGCACGACTAGCCGCTTACGCCAGACTCC
CATCACTCCCCAAGCAGCAAGCCATCGAACAGGCCTTAAAATATCAGCTTATTACCGATGATACCCACTGTATCTTGGTG
AAGACTAACCATAACCAAGTCGATCTGGGCTTGCCTGAAATGCGCACCGTTCCCCATCAAATACCAGCAGGTTATATGGG
TATGGGCAGCGTGATTTGTGAAGGCGATATAGTGTTTTGCGCTAGCGAGCCGGTACCTCAAATGCACCGTGAGCGTGACT
ATCTCGACATTCCGTCATTTTTAAGGTGTGAAGCTGCTATTTACAGTACTAGTGACAATAGTAGTGACACGACTGCAGAA
TCTACGGAATCTATTAAAGAATCGCTTAAAGAGTCAATGCCGACCAGCACCGGTGTTGCAGACAAATTAAATGCAGAGTT
CACACCCAGTAATCATATGGGGCTCAGCGAGTTCGATATTTTTGATCTTGAAGAGATGGGGGAAGATGAGGCCATTCTCA
ATATCCTCACGCAGCTTGAACAACTCGGCTTTGATGAAATCGAGCTGGTAGCAGCTTGGTTGAGTCTCTATAACGAATTT
AACCCAAGCAAGCCGTTATCCAGGCATGTTACACGGCTTGCAAGAATGCTAGTGAAGGAACTCGACATCAAAGCGCTGCT
GATCCAAACCGTTAGAGAAGCGGTACAAGCAGAGCTTACGGCGTAA

Upstream 100 bases:

>100_bases
ATCCAATGAAAGCGGGCCTCACGCCTGAACAAGCAAAACAACTAACACAAGAAGTTATCTCTTTATATCAGCAACTAAAA
CTAAGTTGTAAGGAATAAAA

Downstream 100 bases:

>100_bases
TAGCAAAATCTATTGCACATAAAAAAACAGGCCGAACATTGATTAACCTCTCAATGGTCGGCCTTTTGTTTCTATAGCTA
TCAGCTTATCTACTGCGCTG

Product: vault protein inter-alpha-trypsin subunit

Products: NA

Alternate protein names: Vault Protein Inter-Alpha-Trypsin; Inter-Alpha-Trypsin Inhibitor Domain-Containing Protein; Von Willebrand Factor Type A Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin Domain Protein; Cell Wall Anchor Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin Domain-Containing Protein; Von Willebrand Factor Type A; Von Willebrand Factor Type A Domain Protein; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Vault Protein Inter-Alpha-Trypsin Domain; Transmembrane Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; Inter-Alpha-Trypsin Inhibitor Domain Protein; Von Willebrand Factor

Number of amino acids: Translated: 761; Mature: 761

Protein sequence:

>761_residues
MNDEIGLKTSSGEDVALKAVNVKAVLNGVLSQVNIEQTYINAENTNIEAVYTFPLPLDAVLLELVVEINGETLTGQVKPR
AIAETQYEEAITEGDTAVLLTKIKDGLYCVNLGNLLAGESAIIKFKYAQIHQWQGDSLRFYLPTTLAPRYGNPIDYRLEP
HQVPEHKLLAPYALNFELTIQGQLASAALNSPTHAITKHYDNESLKVSLNNQTAAMDRDLIVEFTQPKYYAGEGLWSKDD
DKVVALTSFYPQIDLPQTTSSRCIKMVVDCSGSMLGDSITQAGIALKQILKLLNEDDWFNIILFGSHHKSLFSESVKANR
ANLDIAAKELANLNADLGGTEMLSALNAAYDSAAPAELASNILLITDGEIWGEEQLICKAQESNHRHFVVGVGSAVSEAF
LKQLADKTGGASEFVTPNENMSSRIVQHFCRIKQSKLTQSDIRFGEESNNDKTLSQSLSQQTTIFAGDTVNSFAQLEQLT
TKQATLSFAYNRASNTEQGESDKQSQSYKQSIELQEYTDSLNTLARLAAYARLPSLPKQQAIEQALKYQLITDDTHCILV
KTNHNQVDLGLPEMRTVPHQIPAGYMGMGSVICEGDIVFCASEPVPQMHRERDYLDIPSFLRCEAAIYSTSDNSSDTTAE
STESIKESLKESMPTSTGVADKLNAEFTPSNHMGLSEFDIFDLEEMGEDEAILNILTQLEQLGFDEIELVAAWLSLYNEF
NPSKPLSRHVTRLARMLVKELDIKALLIQTVREAVQAELTA

Sequences:

>Translated_761_residues
MNDEIGLKTSSGEDVALKAVNVKAVLNGVLSQVNIEQTYINAENTNIEAVYTFPLPLDAVLLELVVEINGETLTGQVKPR
AIAETQYEEAITEGDTAVLLTKIKDGLYCVNLGNLLAGESAIIKFKYAQIHQWQGDSLRFYLPTTLAPRYGNPIDYRLEP
HQVPEHKLLAPYALNFELTIQGQLASAALNSPTHAITKHYDNESLKVSLNNQTAAMDRDLIVEFTQPKYYAGEGLWSKDD
DKVVALTSFYPQIDLPQTTSSRCIKMVVDCSGSMLGDSITQAGIALKQILKLLNEDDWFNIILFGSHHKSLFSESVKANR
ANLDIAAKELANLNADLGGTEMLSALNAAYDSAAPAELASNILLITDGEIWGEEQLICKAQESNHRHFVVGVGSAVSEAF
LKQLADKTGGASEFVTPNENMSSRIVQHFCRIKQSKLTQSDIRFGEESNNDKTLSQSLSQQTTIFAGDTVNSFAQLEQLT
TKQATLSFAYNRASNTEQGESDKQSQSYKQSIELQEYTDSLNTLARLAAYARLPSLPKQQAIEQALKYQLITDDTHCILV
KTNHNQVDLGLPEMRTVPHQIPAGYMGMGSVICEGDIVFCASEPVPQMHRERDYLDIPSFLRCEAAIYSTSDNSSDTTAE
STESIKESLKESMPTSTGVADKLNAEFTPSNHMGLSEFDIFDLEEMGEDEAILNILTQLEQLGFDEIELVAAWLSLYNEF
NPSKPLSRHVTRLARMLVKELDIKALLIQTVREAVQAELTA
>Mature_761_residues
MNDEIGLKTSSGEDVALKAVNVKAVLNGVLSQVNIEQTYINAENTNIEAVYTFPLPLDAVLLELVVEINGETLTGQVKPR
AIAETQYEEAITEGDTAVLLTKIKDGLYCVNLGNLLAGESAIIKFKYAQIHQWQGDSLRFYLPTTLAPRYGNPIDYRLEP
HQVPEHKLLAPYALNFELTIQGQLASAALNSPTHAITKHYDNESLKVSLNNQTAAMDRDLIVEFTQPKYYAGEGLWSKDD
DKVVALTSFYPQIDLPQTTSSRCIKMVVDCSGSMLGDSITQAGIALKQILKLLNEDDWFNIILFGSHHKSLFSESVKANR
ANLDIAAKELANLNADLGGTEMLSALNAAYDSAAPAELASNILLITDGEIWGEEQLICKAQESNHRHFVVGVGSAVSEAF
LKQLADKTGGASEFVTPNENMSSRIVQHFCRIKQSKLTQSDIRFGEESNNDKTLSQSLSQQTTIFAGDTVNSFAQLEQLT
TKQATLSFAYNRASNTEQGESDKQSQSYKQSIELQEYTDSLNTLARLAAYARLPSLPKQQAIEQALKYQLITDDTHCILV
KTNHNQVDLGLPEMRTVPHQIPAGYMGMGSVICEGDIVFCASEPVPQMHRERDYLDIPSFLRCEAAIYSTSDNSSDTTAE
STESIKESLKESMPTSTGVADKLNAEFTPSNHMGLSEFDIFDLEEMGEDEAILNILTQLEQLGFDEIELVAAWLSLYNEF
NPSKPLSRHVTRLARMLVKELDIKALLIQTVREAVQAELTA

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI38195080, Length=646, Percent_Identity=28.6377708978328, Blast_Score=174, Evalue=3e-43,
Organism=Homo sapiens, GI194306644, Length=646, Percent_Identity=28.6377708978328, Blast_Score=174, Evalue=3e-43,
Organism=Homo sapiens, GI38195082, Length=421, Percent_Identity=29.6912114014252, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI112789550, Length=545, Percent_Identity=24.954128440367, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI133925809, Length=582, Percent_Identity=21.6494845360825, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI262050538, Length=608, Percent_Identity=21.3815789473684, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI31542984, Length=608, Percent_Identity=21.3815789473684, Blast_Score=77, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84002; Mature: 84002

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDEIGLKTSSGEDVALKAVNVKAVLNGVLSQVNIEQTYINAENTNIEAVYTFPLPLDAV
CCCCCCCEECCCCCEEEEEEHHHHHHHHHHHHCCEEHEEEECCCCCEEEEEECCCCHHHH
LLELVVEINGETLTGQVKPRAIAETQYEEAITEGDTAVLLTKIKDGLYCVNLGNLLAGES
HHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHHCCCC
AIIKFKYAQIHQWQGDSLRFYLPTTLAPRYGNPIDYRLEPHQVPEHKLLAPYALNFELTI
EEEEEEEHHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
QGQLASAALNSPTHAITKHYDNESLKVSLNNQTAAMDRDLIVEFTQPKYYAGEGLWSKDD
ECCHHHHHHCCCHHHHHHHCCCCEEEEEECCCCHHCCCCEEEEECCCCEECCCCCCCCCC
DKVVALTSFYPQIDLPQTTSSRCIKMVVDCSGSMLGDSITQAGIALKQILKLLNEDDWFN
CCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
IILFGSHHKSLFSESVKANRANLDIAAKELANLNADLGGTEMLSALNAAYDSAAPAELAS
EEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHC
NILLITDGEIWGEEQLICKAQESNHRHFVVGVGSAVSEAFLKQLADKTGGASEFVTPNEN
CEEEEECCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC
MSSRIVQHFCRIKQSKLTQSDIRFGEESNNDKTLSQSLSQQTTIFAGDTVNSFAQLEQLT
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHH
TKQATLSFAYNRASNTEQGESDKQSQSYKQSIELQEYTDSLNTLARLAAYARLPSLPKQQ
HHHHHHHHHECCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AIEQALKYQLITDDTHCILVKTNHNQVDLGLPEMRTVPHQIPAGYMGMGSVICEGDIVFC
HHHHHHHEEEEECCCEEEEEEECCCEEECCCCHHHCCCCCCCCCCCCCCCEEECCCEEEE
ASEPVPQMHRERDYLDIPSFLRCEAAIYSTSDNSSDTTAESTESIKESLKESMPTSTGVA
CCCCCHHHHHCCCCCCCCHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCH
DKLNAEFTPSNHMGLSEFDIFDLEEMGEDEAILNILTQLEQLGFDEIELVAAWLSLYNEF
HHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
NPSKPLSRHVTRLARMLVKELDIKALLIQTVREAVQAELTA
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNDEIGLKTSSGEDVALKAVNVKAVLNGVLSQVNIEQTYINAENTNIEAVYTFPLPLDAV
CCCCCCCEECCCCCEEEEEEHHHHHHHHHHHHCCEEHEEEECCCCCEEEEEECCCCHHHH
LLELVVEINGETLTGQVKPRAIAETQYEEAITEGDTAVLLTKIKDGLYCVNLGNLLAGES
HHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHHCCCC
AIIKFKYAQIHQWQGDSLRFYLPTTLAPRYGNPIDYRLEPHQVPEHKLLAPYALNFELTI
EEEEEEEHHHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
QGQLASAALNSPTHAITKHYDNESLKVSLNNQTAAMDRDLIVEFTQPKYYAGEGLWSKDD
ECCHHHHHHCCCHHHHHHHCCCCEEEEEECCCCHHCCCCEEEEECCCCEECCCCCCCCCC
DKVVALTSFYPQIDLPQTTSSRCIKMVVDCSGSMLGDSITQAGIALKQILKLLNEDDWFN
CCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE
IILFGSHHKSLFSESVKANRANLDIAAKELANLNADLGGTEMLSALNAAYDSAAPAELAS
EEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHC
NILLITDGEIWGEEQLICKAQESNHRHFVVGVGSAVSEAFLKQLADKTGGASEFVTPNEN
CEEEEECCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCC
MSSRIVQHFCRIKQSKLTQSDIRFGEESNNDKTLSQSLSQQTTIFAGDTVNSFAQLEQLT
HHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHHH
TKQATLSFAYNRASNTEQGESDKQSQSYKQSIELQEYTDSLNTLARLAAYARLPSLPKQQ
HHHHHHHHHECCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AIEQALKYQLITDDTHCILVKTNHNQVDLGLPEMRTVPHQIPAGYMGMGSVICEGDIVFC
HHHHHHHEEEEECCCEEEEEEECCCEEECCCCHHHCCCCCCCCCCCCCCCEEECCCEEEE
ASEPVPQMHRERDYLDIPSFLRCEAAIYSTSDNSSDTTAESTESIKESLKESMPTSTGVA
CCCCCHHHHHCCCCCCCCHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCH
DKLNAEFTPSNHMGLSEFDIFDLEEMGEDEAILNILTQLEQLGFDEIELVAAWLSLYNEF
HHCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
NPSKPLSRHVTRLARMLVKELDIKALLIQTVREAVQAELTA
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA