Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is yfiQ [H]

Identifier: 167623888

GI number: 167623888

Start: 2353249

End: 2355951

Strand: Reverse

Name: yfiQ [H]

Synonym: Shal_1958

Alternate gene names: 167623888

Gene position: 2355951-2353249 (Counterclockwise)

Preceding gene: 167623897

Following gene: 167623883

Centisome position: 45.07

GC content: 48.83

Gene sequence:

>2703_bases
ATGAGCCAACGCACTCTTCATAGCCTCTTCAAACCTAAATCAGTTGCCATTATTGGCGCTTCCAACAAGCCCAAACGCGC
GGGTAATGTACTGATGAAAAACCTGCTCTCTGGTGGTTTCTCGGGGCCGATTATGCCGGTGACCCCAAAATATGAAGCGG
TGATGGGTGTACTCGCTTATCCCAATATTCAAGCCCTGCCACTTATTCCCGATCTCGCGATCATCTGCACCACGGCTGGC
AGCGTGCCTGCAATCATCGAAACCTTGGCCCAGTTTGGTTGTAAAGTTGCCATCGTCATGGCATCGGGTATGGCCGATGA
ATTTAACGAAGATGGGATCAGTCTGTTAAGTCAGATGCAGCAATTTGCAGACCGATATGGCATGCGGATCTTAGGCCCCA
ATAGTTTGGGGATGATTTTGCCCAACCTTGGTTTGAACGCAAGCCTTGCTCACACCAGTGCCCTGCCCGGCAAAATCGCC
TTCGTGTCCCAATCTGCCGCTATCTGTACCACGGTATTGGATTGGGCCAACAACAAAGGCATAGGCTTCTCCTCTTTTAT
CTCTCTGGGCGATGCTAACGATATCGATTTTGATGAGCTACTGGATTACTTAGGACGAGATTCAAAAACCGATGCAATCT
TGCTCTACATCGACTCGGTTAACGAAAAACGTCATTTCCTGTCTGCGGCGCGGGCGGCGTCACGTAATAAACCTATCTTG
GTGATTAAGTCAGGCCGAAGTATTGAGGGGGGCAACGCTGCTCAGTTACACACTGGCGGCGTGTCTGGTAACGATGCGGT
TTATGAAGCGGCCTTCAGACGAGCGGGTATGCTGCGGGTTAACGATCTTATCGAGTTGTTTGCCGCCGTTGAGACCTTGG
CCCACTCAAGACCTTTGCAGGGTGAGCGCCTGGGGATAATCAGTAATGGTGGTGGCCCAGCTGTGCTGGCGTTAGATGAG
TTAATCTTAGGTGGAGGCAAACTGCCTGCACTATCGAGTGAAATTTATCAGCGGCTTAACACGCTTTTACCTAAGAGTTG
GTCTGGGCAAAATCCGGTGGATATCGGTGGTGATTCAGATGCAAACCGTTATGCACAATCGCTTGAGATCTTAATGGACA
GTGACGATCTCGATGCGATCTTAATCTTGCATTCACCTTCAGCGTTAGGCGAAAGCGTCGGGGTCGCCGAAGCGATTGCA
GAGACCATCGCCAAGCACCCCAATCGACACAAAATCAATATTCTGACCAACTGGAGTGGCGAAGATTCAGCCTATGAGGC
CCGTAAGCATTTTTCAAAGTCTCGCATTCCGACCTATCGCACACCAGAAGGTGCCGTGGGTGCATTTATGCATATGGTTG
AATACCGTCGTAACCAAAAGCTACTGCAAGAAGTGCCACAGTCCATTCCTGATAATATTCCCGCCGATTCCACATTGGCC
CGAGAGAAGTTACAACAGGCGTTAGACCAAGGTAAAACCGTTTTAGAAACCCATGAGTCACGTGCCATTTTAAGCGCCTA
TGGGCTCAATACTATCGATACCTGGTTTGCGACAACCGCGGAGCAAGCCGTTGAGTTTGCAAAGCTTGCTGGTTACCCTA
TCGCGTTAAAGCTGCAGTCACCGGATATTCATTATAAGTCCGATATACAAGGCGTGATGCTCAACCTAACTTCCGATCTG
GAGGTTGAACATGCAGCGAATGCCATGATTGAGCGGGTGATCTCAGTTAATCCCGATGCACGGATTGAGGGGCTGATCGT
TCAGAAAATGGCGCTCACCGCCGGTGCGCAGGAGATAAGAGTCGCAGTAGCTAATGATCCTGTGTTTGGGCCGGCAATTT
TGCTAGGTGAAGGTGGCTCTGAATGGGAGCCCACTAAAGATGCGGTCGTTGCCCTGCCACCACTGAATATGACGCTGGCC
CGCTATATGGTGATCCAAGCGCTCAAAAACCAGAAGATCAGAGATAGGCATTTGCCACTTGGGTTAAATATGCATGCACT
GTGCGTGATGCTGACCCAGATCTCACACTTGATTATTGACTGTCCAGAAATCGCCACTCTCGATTTAAACCCCGTACTGT
GCGCTGGTGAGCAGATCACCCTGTTAGATGTAAATATCGGCTTACAACAAGAACCGGTTGATAACGCATCAAGGTTGGCG
ATCTCTCCTTACCCGAAAGAACTCGAGGAGATGGTTACCCTCAAGAATGGTAATAAGGTCATGCTACGGCCTATTTTGCC
TGAAGATGAACCTAAGCATATGGCTTTTGATAACTCCCTTTCCGATGAGGATAGATACAAGCGTTACTTTGGGGTTCGCT
CTAAGATGACCCATGAAGAGATGGCTGTATTAACTCAGATTGACTACGCCAGAGAGATGGCCTTTATTGCCACGGCAATA
GGAGACGATGGCGAAGAAACCACCTTAGGTGCCATTCGAGCCTCTATCGATCCTGATAATACCGAAGCCGAATTTGCCAT
GGCGGTGCGTAGTAATTATCAAGGCCAGGGTTTAGGAAAACTATTACTTGAGAAACTGGTTAAGTATTACAAGGATAACG
ACACGCTTGTGCTGACCGGCTTTACCATGTTTGAAAATAGAAACATGGCCAGTCTTGCTAAACGCCTTGGGTTTACGGTG
ACCTTTGACATGGAGGATCGCTTGATTAACATGCATATGGACTTAAAAGCACCGCAAAATTAA

Upstream 100 bases:

>100_bases
TTCCTACGCTAAGGCGCCTAGAATTGAACTCGCGCAAGGCCTCTGAAATGAGCATGTTCAAGTCGTTTGGGTATAACATA
CTGACTTATAGGATAAGTTC

Downstream 100 bases:

>100_bases
GCATAGGCGCACAAACAAAAAGGCCGTTAAGATTTATCTTAACGGCCTTTCTCAATTAACACTGTTTTTAATAATGCCCA
ATTTCGAATCCTGTTCTAAA

Product: GCN5-like N-acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 900; Mature: 899

Protein sequence:

>900_residues
MSQRTLHSLFKPKSVAIIGASNKPKRAGNVLMKNLLSGGFSGPIMPVTPKYEAVMGVLAYPNIQALPLIPDLAIICTTAG
SVPAIIETLAQFGCKVAIVMASGMADEFNEDGISLLSQMQQFADRYGMRILGPNSLGMILPNLGLNASLAHTSALPGKIA
FVSQSAAICTTVLDWANNKGIGFSSFISLGDANDIDFDELLDYLGRDSKTDAILLYIDSVNEKRHFLSAARAASRNKPIL
VIKSGRSIEGGNAAQLHTGGVSGNDAVYEAAFRRAGMLRVNDLIELFAAVETLAHSRPLQGERLGIISNGGGPAVLALDE
LILGGGKLPALSSEIYQRLNTLLPKSWSGQNPVDIGGDSDANRYAQSLEILMDSDDLDAILILHSPSALGESVGVAEAIA
ETIAKHPNRHKINILTNWSGEDSAYEARKHFSKSRIPTYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSIPDNIPADSTLA
REKLQQALDQGKTVLETHESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPIALKLQSPDIHYKSDIQGVMLNLTSDL
EVEHAANAMIERVISVNPDARIEGLIVQKMALTAGAQEIRVAVANDPVFGPAILLGEGGSEWEPTKDAVVALPPLNMTLA
RYMVIQALKNQKIRDRHLPLGLNMHALCVMLTQISHLIIDCPEIATLDLNPVLCAGEQITLLDVNIGLQQEPVDNASRLA
ISPYPKELEEMVTLKNGNKVMLRPILPEDEPKHMAFDNSLSDEDRYKRYFGVRSKMTHEEMAVLTQIDYAREMAFIATAI
GDDGEETTLGAIRASIDPDNTEAEFAMAVRSNYQGQGLGKLLLEKLVKYYKDNDTLVLTGFTMFENRNMASLAKRLGFTV
TFDMEDRLINMHMDLKAPQN

Sequences:

>Translated_900_residues
MSQRTLHSLFKPKSVAIIGASNKPKRAGNVLMKNLLSGGFSGPIMPVTPKYEAVMGVLAYPNIQALPLIPDLAIICTTAG
SVPAIIETLAQFGCKVAIVMASGMADEFNEDGISLLSQMQQFADRYGMRILGPNSLGMILPNLGLNASLAHTSALPGKIA
FVSQSAAICTTVLDWANNKGIGFSSFISLGDANDIDFDELLDYLGRDSKTDAILLYIDSVNEKRHFLSAARAASRNKPIL
VIKSGRSIEGGNAAQLHTGGVSGNDAVYEAAFRRAGMLRVNDLIELFAAVETLAHSRPLQGERLGIISNGGGPAVLALDE
LILGGGKLPALSSEIYQRLNTLLPKSWSGQNPVDIGGDSDANRYAQSLEILMDSDDLDAILILHSPSALGESVGVAEAIA
ETIAKHPNRHKINILTNWSGEDSAYEARKHFSKSRIPTYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSIPDNIPADSTLA
REKLQQALDQGKTVLETHESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPIALKLQSPDIHYKSDIQGVMLNLTSDL
EVEHAANAMIERVISVNPDARIEGLIVQKMALTAGAQEIRVAVANDPVFGPAILLGEGGSEWEPTKDAVVALPPLNMTLA
RYMVIQALKNQKIRDRHLPLGLNMHALCVMLTQISHLIIDCPEIATLDLNPVLCAGEQITLLDVNIGLQQEPVDNASRLA
ISPYPKELEEMVTLKNGNKVMLRPILPEDEPKHMAFDNSLSDEDRYKRYFGVRSKMTHEEMAVLTQIDYAREMAFIATAI
GDDGEETTLGAIRASIDPDNTEAEFAMAVRSNYQGQGLGKLLLEKLVKYYKDNDTLVLTGFTMFENRNMASLAKRLGFTV
TFDMEDRLINMHMDLKAPQN
>Mature_899_residues
SQRTLHSLFKPKSVAIIGASNKPKRAGNVLMKNLLSGGFSGPIMPVTPKYEAVMGVLAYPNIQALPLIPDLAIICTTAGS
VPAIIETLAQFGCKVAIVMASGMADEFNEDGISLLSQMQQFADRYGMRILGPNSLGMILPNLGLNASLAHTSALPGKIAF
VSQSAAICTTVLDWANNKGIGFSSFISLGDANDIDFDELLDYLGRDSKTDAILLYIDSVNEKRHFLSAARAASRNKPILV
IKSGRSIEGGNAAQLHTGGVSGNDAVYEAAFRRAGMLRVNDLIELFAAVETLAHSRPLQGERLGIISNGGGPAVLALDEL
ILGGGKLPALSSEIYQRLNTLLPKSWSGQNPVDIGGDSDANRYAQSLEILMDSDDLDAILILHSPSALGESVGVAEAIAE
TIAKHPNRHKINILTNWSGEDSAYEARKHFSKSRIPTYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSIPDNIPADSTLAR
EKLQQALDQGKTVLETHESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPIALKLQSPDIHYKSDIQGVMLNLTSDLE
VEHAANAMIERVISVNPDARIEGLIVQKMALTAGAQEIRVAVANDPVFGPAILLGEGGSEWEPTKDAVVALPPLNMTLAR
YMVIQALKNQKIRDRHLPLGLNMHALCVMLTQISHLIIDCPEIATLDLNPVLCAGEQITLLDVNIGLQQEPVDNASRLAI
SPYPKELEEMVTLKNGNKVMLRPILPEDEPKHMAFDNSLSDEDRYKRYFGVRSKMTHEEMAVLTQIDYAREMAFIATAIG
DDGEETTLGAIRASIDPDNTEAEFAMAVRSNYQGQGLGKLLLEKLVKYYKDNDTLVLTGFTMFENRNMASLAKRLGFTVT
FDMEDRLINMHMDLKAPQN

Specific function: Unknown

COG id: COG1042

COG function: function code C; Acyl-CoA synthetase (NDP forming)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1788938, Length=895, Percent_Identity=51.9553072625698, Blast_Score=917, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR011761
- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR016102 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 97964; Mature: 97832

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRTLHSLFKPKSVAIIGASNKPKRAGNVLMKNLLSGGFSGPIMPVTPKYEAVMGVLAY
CCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC
PNIQALPLIPDLAIICTTAGSVPAIIETLAQFGCKVAIVMASGMADEFNEDGISLLSQMQ
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCHHCCCHHHHHHHHHH
QFADRYGMRILGPNSLGMILPNLGLNASLAHTSALPGKIAFVSQSAAICTTVLDWANNKG
HHHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCC
IGFSSFISLGDANDIDFDELLDYLGRDSKTDAILLYIDSVNEKRHFLSAARAASRNKPIL
CCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEE
VIKSGRSIEGGNAAQLHTGGVSGNDAVYEAAFRRAGMLRVNDLIELFAAVETLAHSRPLQ
EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
GERLGIISNGGGPAVLALDELILGGGKLPALSSEIYQRLNTLLPKSWSGQNPVDIGGDSD
CCEEEEEECCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
ANRYAQSLEILMDSDDLDAILILHSPSALGESVGVAEAIAETIAKHPNRHKINILTNWSG
HHHHHHHHHHEECCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCC
EDSAYEARKHFSKSRIPTYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSIPDNIPADSTLA
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
REKLQQALDQGKTVLETHESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPIALKLQS
HHHHHHHHHCCCCEEHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PDIHYKSDIQGVMLNLTSDLEVEHAANAMIERVISVNPDARIEGLIVQKMALTAGAQEIR
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEE
VAVANDPVFGPAILLGEGGSEWEPTKDAVVALPPLNMTLARYMVIQALKNQKIRDRHLPL
EEEECCCCCCCEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHCCCCC
GLNMHALCVMLTQISHLIIDCPEIATLDLNPVLCAGEQITLLDVNIGLQQEPVDNASRLA
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCEEEEEEEECCCCCCCCCCCCCEE
ISPYPKELEEMVTLKNGNKVMLRPILPEDEPKHMAFDNSLSDEDRYKRYFGVRSKMTHEE
ECCCHHHHHHHHEECCCCEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCHHH
MAVLTQIDYAREMAFIATAIGDDGEETTLGAIRASIDPDNTEAEFAMAVRSNYQGQGLGK
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHEEECCCCCCCHHHHHHHHHCCCCCCCHHH
LLLEKLVKYYKDNDTLVLTGFTMFENRNMASLAKRLGFTVTFDMEDRLINMHMDLKAPQN
HHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHCCCEEEEECCCCEEEEEEECCCCCC
>Mature Secondary Structure 
SQRTLHSLFKPKSVAIIGASNKPKRAGNVLMKNLLSGGFSGPIMPVTPKYEAVMGVLAY
CCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC
PNIQALPLIPDLAIICTTAGSVPAIIETLAQFGCKVAIVMASGMADEFNEDGISLLSQMQ
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCHHCCCHHHHHHHHHH
QFADRYGMRILGPNSLGMILPNLGLNASLAHTSALPGKIAFVSQSAAICTTVLDWANNKG
HHHHHCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCC
IGFSSFISLGDANDIDFDELLDYLGRDSKTDAILLYIDSVNEKRHFLSAARAASRNKPIL
CCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCEE
VIKSGRSIEGGNAAQLHTGGVSGNDAVYEAAFRRAGMLRVNDLIELFAAVETLAHSRPLQ
EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
GERLGIISNGGGPAVLALDELILGGGKLPALSSEIYQRLNTLLPKSWSGQNPVDIGGDSD
CCEEEEEECCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
ANRYAQSLEILMDSDDLDAILILHSPSALGESVGVAEAIAETIAKHPNRHKINILTNWSG
HHHHHHHHHHEECCCCCCEEEEEECCHHHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCC
EDSAYEARKHFSKSRIPTYRTPEGAVGAFMHMVEYRRNQKLLQEVPQSIPDNIPADSTLA
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
REKLQQALDQGKTVLETHESRAILSAYGLNTIDTWFATTAEQAVEFAKLAGYPIALKLQS
HHHHHHHHHCCCCEEHHHHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
PDIHYKSDIQGVMLNLTSDLEVEHAANAMIERVISVNPDARIEGLIVQKMALTAGAQEIR
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEE
VAVANDPVFGPAILLGEGGSEWEPTKDAVVALPPLNMTLARYMVIQALKNQKIRDRHLPL
EEEECCCCCCCEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHCCCCC
GLNMHALCVMLTQISHLIIDCPEIATLDLNPVLCAGEQITLLDVNIGLQQEPVDNASRLA
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEECCCEEEEEEEECCCCCCCCCCCCCEE
ISPYPKELEEMVTLKNGNKVMLRPILPEDEPKHMAFDNSLSDEDRYKRYFGVRSKMTHEE
ECCCHHHHHHHHEECCCCEEEEEECCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCHHH
MAVLTQIDYAREMAFIATAIGDDGEETTLGAIRASIDPDNTEAEFAMAVRSNYQGQGLGK
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHEEECCCCCCCHHHHHHHHHCCCCCCCHHH
LLLEKLVKYYKDNDTLVLTGFTMFENRNMASLAKRLGFTVTFDMEDRLINMHMDLKAPQN
HHHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHCCCEEEEECCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]