Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623779

Identifier: 167623779

GI number: 167623779

Start: 2208500

End: 2209681

Strand: Reverse

Name: 167623779

Synonym: Shal_1849

Alternate gene names: NA

Gene position: 2209681-2208500 (Counterclockwise)

Preceding gene: 167623784

Following gene: 167623774

Centisome position: 42.28

GC content: 45.69

Gene sequence:

>1182_bases
ATGTGCACAAGAATTTTTAACAGCTTGAACCCTGAATTCCCCATGACCGGCAGAAACTTTGACTGGTTTAGCCCATTAAC
CACCTACCTATATAGAATTCCCAATAGCAAAGAGGTGCGCTCAGGTAACTTAAAACAACAAGCACACCCAGTCGAATTAT
CAAACCATGATGTTTTCACTTGGCAGGCAAAGTATGCCAGTATAGCTTCCCTAGTGGGAAATGATCAGCTTGGATTAGGC
AGCATTGATGGCATTAATAGCCAAGGACTCGCTGTTAATGGTCTTGAAGATCTATTTGCTTACTTTGAAGATAATGACAA
GGTCATTGATGATGGAAATATAAAGCCCATCGCTCTATTAAAAGCCATAGAGAAAGATCGCAACGCATTTCTTGATCAAC
TTAAAATACCTGAAGGTGCGCAGCTACTTGGCTCTCTTCGTTGGGTCCAATTCACGTTAGATTGTTTTGATACTGTAAAG
GCTGCAACCAGCTACTTCAGTCAAAATCCAGATCAGCTATACATCTATAGTGATGATGTTCCTGACGGGTTAGACACCAC
CACAAAGGCTAAGCTGCACCTGACTCTCTCAGACAGAACAGGCGACTCAGCCATTATTGAACTGAGAGATGGCAAATTTA
ACGTACACGAAAATCGTGACTACAATGTAGCAACGGTTAACCCGGGTTATGATGTTCAGCTCGCACTCTTAAAGCCATGG
CAGAAGAAATGGCAACAAGAGGTTAATATACAAGACAGCCTCGCAGGTTTTACCCTCTTTGATCTGCCTGGCGGCCCGGT
GTCGCAACAACGCTTTGCCCGCGCAGCTTATTACTATGAGTTTTCTGAGCCTGCCAGCAACCGCCAGAATGCCTTAGCTC
AAACAAGAGCACTTATGGCCGCTACCGCAACGCCGCTCTGTTACAACTCAATGAAACACTCTACCGTTAAGGGGCAGTCC
TCCAATACCCTATGGTGCAGTGTCAGCGAGCATGGCGCTTTGCGCTATCACCTAATAAACACCTATAGCATGGCACCTGT
ATGGGTGAGCTTTGATAACCCAAGCAACAGCTGTGAGCGTCTCCTCATCCTCAAAAGAGACCCAAATGGAGAAGCGATAT
CCAGCGAACTCATGGGAGATGTACAACAACAGCTACACCCCTGCGACAACCCTTTCATGTAG

Upstream 100 bases:

>100_bases
AATTAAATAAACTCAACTACAACCCACTTAATTAACGCATGATTTAACACACGATAATTATTAAGCAAAAACTAATAAAA
AACTCTCAAAAGGATATGGA

Downstream 100 bases:

>100_bases
TCTTTCGTGTAGTCTCTTGTGTTGTCTATTGTGTAGTTAAGCTAAACCGAGTGAACTAATTGAATGACAAGCTGCAAGAA
ACCCCAATAGCGGGATCATC

Product: choloylglycine hydrolase

Products: NA

Alternate protein names: Choloylglycine Hydrolase Family Protein; Preprotein Translocase SecA Subunit; Hydrolase Penicillin Acylase; Choloylglycine Hydrolase Protein; Hydrolase; Penicillin Acylase; Penicillin Amidase; Conjugated Bile Salt Hydrolase; Exported Carbon-Nitrogen Hydrolase; Exported Hydrolase; Twin-Arginine Translocation Pathway Signal; Hydrolase/Amidase; Penicillin Acylase . Cysteine Peptidase. MEROPS Family C

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MCTRIFNSLNPEFPMTGRNFDWFSPLTTYLYRIPNSKEVRSGNLKQQAHPVELSNHDVFTWQAKYASIASLVGNDQLGLG
SIDGINSQGLAVNGLEDLFAYFEDNDKVIDDGNIKPIALLKAIEKDRNAFLDQLKIPEGAQLLGSLRWVQFTLDCFDTVK
AATSYFSQNPDQLYIYSDDVPDGLDTTTKAKLHLTLSDRTGDSAIIELRDGKFNVHENRDYNVATVNPGYDVQLALLKPW
QKKWQQEVNIQDSLAGFTLFDLPGGPVSQQRFARAAYYYEFSEPASNRQNALAQTRALMAATATPLCYNSMKHSTVKGQS
SNTLWCSVSEHGALRYHLINTYSMAPVWVSFDNPSNSCERLLILKRDPNGEAISSELMGDVQQQLHPCDNPFM

Sequences:

>Translated_393_residues
MCTRIFNSLNPEFPMTGRNFDWFSPLTTYLYRIPNSKEVRSGNLKQQAHPVELSNHDVFTWQAKYASIASLVGNDQLGLG
SIDGINSQGLAVNGLEDLFAYFEDNDKVIDDGNIKPIALLKAIEKDRNAFLDQLKIPEGAQLLGSLRWVQFTLDCFDTVK
AATSYFSQNPDQLYIYSDDVPDGLDTTTKAKLHLTLSDRTGDSAIIELRDGKFNVHENRDYNVATVNPGYDVQLALLKPW
QKKWQQEVNIQDSLAGFTLFDLPGGPVSQQRFARAAYYYEFSEPASNRQNALAQTRALMAATATPLCYNSMKHSTVKGQS
SNTLWCSVSEHGALRYHLINTYSMAPVWVSFDNPSNSCERLLILKRDPNGEAISSELMGDVQQQLHPCDNPFM
>Mature_393_residues
MCTRIFNSLNPEFPMTGRNFDWFSPLTTYLYRIPNSKEVRSGNLKQQAHPVELSNHDVFTWQAKYASIASLVGNDQLGLG
SIDGINSQGLAVNGLEDLFAYFEDNDKVIDDGNIKPIALLKAIEKDRNAFLDQLKIPEGAQLLGSLRWVQFTLDCFDTVK
AATSYFSQNPDQLYIYSDDVPDGLDTTTKAKLHLTLSDRTGDSAIIELRDGKFNVHENRDYNVATVNPGYDVQLALLKPW
QKKWQQEVNIQDSLAGFTLFDLPGGPVSQQRFARAAYYYEFSEPASNRQNALAQTRALMAATATPLCYNSMKHSTVKGQS
SNTLWCSVSEHGALRYHLINTYSMAPVWVSFDNPSNSCERLLILKRDPNGEAISSELMGDVQQQLHPCDNPFM

Specific function: Unknown

COG id: COG3049

COG function: function code M; Penicillin V acylase and related amidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44102; Mature: 44102

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTRIFNSLNPEFPMTGRNFDWFSPLTTYLYRIPNSKEVRSGNLKQQAHPVELSNHDVFT
CCHHHHHHCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCEEECCCEEEE
WQAKYASIASLVGNDQLGLGSIDGINSQGLAVNGLEDLFAYFEDNDKVIDDGNIKPIALL
EEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCEEEECCCCCHHHHH
KAIEKDRNAFLDQLKIPEGAQLLGSLRWVQFTLDCFDTVKAATSYFSQNPDQLYIYSDDV
HHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCC
PDGLDTTTKAKLHLTLSDRTGDSAIIELRDGKFNVHENRDYNVATVNPGYDVQLALLKPW
CCCCCCCCEEEEEEEEECCCCCEEEEEEECCEEEECCCCCEEEEEECCCCCEEEEEECHH
QKKWQQEVNIQDSLAGFTLFDLPGGPVSQQRFARAAYYYEFSEPASNRQNALAQTRALMA
HHHHHHHCCCHHHHCCEEEEECCCCCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHH
ATATPLCYNSMKHSTVKGQSSNTLWCSVSEHGALRYHLINTYSMAPVWVSFDNPSNSCER
HHCCCHHHHCCCCCEECCCCCCEEEEEECCCCCEEEEEEEEEEECEEEEEECCCCCCCEE
LLILKRDPNGEAISSELMGDVQQQLHPCDNPFM
EEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MCTRIFNSLNPEFPMTGRNFDWFSPLTTYLYRIPNSKEVRSGNLKQQAHPVELSNHDVFT
CCHHHHHHCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCCEEECCCEEEE
WQAKYASIASLVGNDQLGLGSIDGINSQGLAVNGLEDLFAYFEDNDKVIDDGNIKPIALL
EEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCCCCEEEECCCCCHHHHH
KAIEKDRNAFLDQLKIPEGAQLLGSLRWVQFTLDCFDTVKAATSYFSQNPDQLYIYSDDV
HHHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCC
PDGLDTTTKAKLHLTLSDRTGDSAIIELRDGKFNVHENRDYNVATVNPGYDVQLALLKPW
CCCCCCCCEEEEEEEEECCCCCEEEEEEECCEEEECCCCCEEEEEECCCCCEEEEEECHH
QKKWQQEVNIQDSLAGFTLFDLPGGPVSQQRFARAAYYYEFSEPASNRQNALAQTRALMA
HHHHHHHCCCHHHHCCEEEEECCCCCCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHH
ATATPLCYNSMKHSTVKGQSSNTLWCSVSEHGALRYHLINTYSMAPVWVSFDNPSNSCER
HHCCCHHHHCCCCCEECCCCCCEEEEEECCCCCEEEEEEEEEEECEEEEEECCCCCCCEE
LLILKRDPNGEAISSELMGDVQQQLHPCDNPFM
EEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA