| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is hisI [H]
Identifier: 167623747
GI number: 167623747
Start: 2174102
End: 2174743
Strand: Reverse
Name: hisI [H]
Synonym: Shal_1817
Alternate gene names: 167623747
Gene position: 2174743-2174102 (Counterclockwise)
Preceding gene: 167623748
Following gene: 167623746
Centisome position: 41.61
GC content: 45.33
Gene sequence:
>642_bases ATGACTAAGCTTGACCAATCAAAGCCGGTAGACAGCAACCTTATTGGTCTATTGGACTGGAAAAAAACGGAGGGGTTAAT CCCTACCGTGGTACAAAACTTCCTCACGGGTAAAGTACTGATGCTCGGCTACATGGATAAAGCCGCATTAGATAAGACCT TATCGACTAAGCAGGTAACCTTTTTTAGTCGCAGCAAGCAAAGACTTTGGACCAAGGGAGAAACCTCTGGCAACACTCTT GAGTTAATAGCGATCAATATGGACTGCGACAACGATAGCCTGCTAGTACAAGTACTTCCCAATGGACCGACTTGCCACAA AGGCACCGAGAGTTGCTGGAAAGACGGTAACGCGCATAGCTTTATCGATAACTTGGCAGGCTTAATTGCATCACGTAAAG GCCAAGACCCGGAGTCGAGCTATACCGCTCACCTGTTTGAACGTGGCACTAAACGTATCGCTCAAAAGGTCGGTGAAGAG GGCTTAGAAACGGCATTAGCCGCAGCAACTCACGACAAGCCTGAACTGATAGATGAGGCATCGGATCTTATCTATCACCT GCTGGTTTTGTTAGAAGATCAAGATTTAAGCATGCAAGATATCAACTTAAATCTGATGAAAAGACACAATAAAACCAAGT AG
Upstream 100 bases:
>100_bases AGAGTTAAAACAGTATCTTAAAGATAATCAGATTGCAGTACGCGTTTAGGCTAAATCTAAAAGATTTAATTAAACGAGTT TATCCAATTAGGGACATAAT
Downstream 100 bases:
>100_bases CCGAATTGACGGGCGTAAGCTAAGTTTACGCCCTTTACCTTTGGCGATAATTAATCGGTAGCAATAACGCGCAACAGCAT AATATTTCAATTCATCCCCC
Product: bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein
Products: NA
Alternate protein names: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; Phosphoribosyl-ATP pyrophosphatase; PRA-PH [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTKLDQSKPVDSNLIGLLDWKKTEGLIPTVVQNFLTGKVLMLGYMDKAALDKTLSTKQVTFFSRSKQRLWTKGETSGNTL ELIAINMDCDNDSLLVQVLPNGPTCHKGTESCWKDGNAHSFIDNLAGLIASRKGQDPESSYTAHLFERGTKRIAQKVGEE GLETALAAATHDKPELIDEASDLIYHLLVLLEDQDLSMQDINLNLMKRHNKTK
Sequences:
>Translated_213_residues MTKLDQSKPVDSNLIGLLDWKKTEGLIPTVVQNFLTGKVLMLGYMDKAALDKTLSTKQVTFFSRSKQRLWTKGETSGNTL ELIAINMDCDNDSLLVQVLPNGPTCHKGTESCWKDGNAHSFIDNLAGLIASRKGQDPESSYTAHLFERGTKRIAQKVGEE GLETALAAATHDKPELIDEASDLIYHLLVLLEDQDLSMQDINLNLMKRHNKTK >Mature_212_residues TKLDQSKPVDSNLIGLLDWKKTEGLIPTVVQNFLTGKVLMLGYMDKAALDKTLSTKQVTFFSRSKQRLWTKGETSGNTLE LIAINMDCDNDSLLVQVLPNGPTCHKGTESCWKDGNAHSFIDNLAGLIASRKGQDPESSYTAHLFERGTKRIAQKVGEEG LETALAAATHDKPELIDEASDLIYHLLVLLEDQDLSMQDINLNLMKRHNKTK
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PRA-PH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=195, Percent_Identity=63.5897435897436, Blast_Score=252, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6319819, Length=200, Percent_Identity=33.5, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023019 - InterPro: IPR008179 - InterPro: IPR021130 - InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH; PF01503 PRA-PH [H]
EC number: =3.5.4.19; =3.6.1.31 [H]
Molecular weight: Translated: 23670; Mature: 23539
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLDQSKPVDSNLIGLLDWKKTEGLIPTVVQNFLTGKVLMLGYMDKAALDKTLSTKQVT CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHH FFSRSKQRLWTKGETSGNTLELIAINMDCDNDSLLVQVLPNGPTCHKGTESCWKDGNAHS HHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHCCCCHHH FIDNLAGLIASRKGQDPESSYTAHLFERGTKRIAQKVGEEGLETALAAATHDKPELIDEA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SDLIYHLLVLLEDQDLSMQDINLNLMKRHNKTK HHHHHHHHHHHCCCCCCHHHCCHHHHHHCCCCC >Mature Secondary Structure TKLDQSKPVDSNLIGLLDWKKTEGLIPTVVQNFLTGKVLMLGYMDKAALDKTLSTKQVT CCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHH FFSRSKQRLWTKGETSGNTLELIAINMDCDNDSLLVQVLPNGPTCHKGTESCWKDGNAHS HHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHCCCCHHH FIDNLAGLIASRKGQDPESSYTAHLFERGTKRIAQKVGEEGLETALAAATHDKPELIDEA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SDLIYHLLVLLEDQDLSMQDINLNLMKRHNKTK HHHHHHHHHHHCCCCCCHHHCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]