| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is chvG [H]
Identifier: 167623664
GI number: 167623664
Start: 2076947
End: 2079130
Strand: Reverse
Name: chvG [H]
Synonym: Shal_1733
Alternate gene names: 167623664
Gene position: 2079130-2076947 (Counterclockwise)
Preceding gene: 167623665
Following gene: 167623663
Centisome position: 39.78
GC content: 46.2
Gene sequence:
>2184_bases ATGTTTAATTTGCCAATCGGGCTGCGCACTAAAGTCGCAGTATTGTCTTTGTTCTTACTCTGCTTACCTTGGTTAGGTTA TCAGTACGTGTGGGAGATGGAGAAATACCTGCGCCACGGCCAAGAGAAAACCTTAGAAGGCACAACCCAAGCACTGGCAA CCGCCCTGCACGAAAGACCAAAACTCTTTGATAGCCAAGCAAGCTTTTTAACTCAGGTTGAAAAGGGCCGCGATCTGTAC GCTTACCCACTTTCAGGGCCTATTCAACTCGACGGTAAACTGGCGGATTGGAGTAGCTATCGCCATCGTGCACTTAATTA CGGCGATGATTATCAAATCTATAAACGTAATGAAAACCAGCCGTTAAACCTCAGCTTTACCCATATGGTAGGCAAATACG CCGGCTATCTGTACGCCTTTTTCGAAGTTAGCGATCCACACGTTGTTTACCGCGGAAAAAACAGTCTTAGCATAGATAAT AACGATCATATTGCCATCGCTACACTCGCACCCGATGGCAAGTTTCGCCGTTATATTGTTGCAACCACACAAGATGGCTG GATAAGCGCCTTCGAACTGCCTGAAGATCCTAGCCTTTCAACCCCTGTAACACCGGAAGTTAAAATTCAGGGTAAGTGGA CCAAGAGTAAACAAGGCTACAATGTCGAACTCAGGATCCCGCTTAATATGGTCGGCAGTAAACTCGGCTTTGCCGTTTAT GACGTAAACGATAAAAAAAGCCGCGTATTAGATGCCGTGGTCGGTACCTCAGCAATCGATGATGTCAGCAAGCTGGGCAC CGTACTTGTCCCCTCACCTGAAATCGAAAGTATTATTAAAGGCATGAGCCATAATAGCTCTCGTATTTGGGTGGTCGATA AACACGGCCGCGTATTAGCAAAGTCCGGCGATATTCGCTCAGATAATAGCGTCTGGTCACGTGCTAATGTCGATAACGAT GACAACTCTGGCTGGGAGCAATTCAAACATAAATACTTGCATCCGCTTTACTACAAAATTCTGACCACACCAGCTAAAGA CTTTATCGATTCCTTGCAAGACTCCACTGTGTTGCAAGGGAGTCATATCTCTAAAGCCTTAAACGGCGAGCAAGGCTCAA CGTGGCGCTTAACCCCCGACAACAAAGCGGTGGTGCTCGCGGCCGCTAGCCCTATTTGGATTGATGATAAAGTGATGGGA GTGGTGATTGCCGAAGAAACCACTCACGGCATTCGAACCTTAAGAAACAAAGCCTTAGAAAAGCTGTTTAACGTGATTTT AACCATCATGAGTATGGGCACCTTAGCGCTATTTTTCTTTGCTTCGAATATCTCAAGCCGTATTCGCAAATTGCGTGACG AAGCCGAGCAAGCGATCGATAGCCAAGGGCGAATAAAAAATGAAATTCAGGGCTCTAAAGTCCGTGATGAGATCGGCGAT CTATCGCGAAGTTTCGCCAGTATCGTTAGCCGCTTAAGCCAATATACTCATTACTTAGAAAACATGTCTTCGCGTTTATC TCACGAGCTGCGCACCCCCGTTGCAGTGGTGCGCTCATCGCTAGAGCATCTTGGCCTGCAACAGCTTAGCCCCGATAGTC GCAAATATGTTGACCGGGCACAAGAAGGCGTTAATCGCCTGAATATGATCTTAAACAATATGAGCGAAGCCACTCGTTTA GAAGCAAGCTTATCTCATGCCGACACTACTGTTTTTCCGCTAGAAAAAGTCATCAACGGCTGCATGCAGGGCTATCAAAT GACCTACCCCAATCAAGCATTTGAGCTCGATATTACCCAAGAGAGTATTGCGGTATTAGGGGTGCCTGAATATATCGCCC AGCTAATGGATAAACTCATCGCTAACGCCCAAGAGTTTAGCCATCCCGACAGCTCAATTAATGTTGTGCTAAAACTGAAA AATAAATTCGCCGTACTGAGCGTCAGTAACCAAGGGCCGGCACTACCAGAGAACATGGCTGAGCAGATTTTTGAGTCCAT GGTATCTGTGCGAGCGCAAAAAGCCCAAGATAAGCCGCACCTAGGCTTGGGTCTTTATATCGCTAGACTTATTTGCCAAT TTCATGACGGTAAAATTAGCGCCTGTAATACCCAAGATAAGGCCGGAAATGTTAGCGGCGTTAAGATCACGATTAAACTA CCAATAAGCAAAGAAGGTCTTTAA
Upstream 100 bases:
>100_bases TAGTTTATAAACAGGCTCATTAGTTAACTCATGGATAGGGTTATAGTCGAGTCATCTTCAGGTCATAATTAATGGCCATC ATTTAGGTAGTTGTTACGCC
Downstream 100 bases:
>100_bases AAGTGTTAGGCCTGTTTCAAACAATGGCAAAATTGAAAACTGCTCCTGAAAGCGAATGTTGAAGATAATGACACTTTATT TTGGCCGTTTAGATGTTAAG
Product: histidine kinase
Products: NA
Alternate protein names: Histidine kinase sensory protein ExoS [H]
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MFNLPIGLRTKVAVLSLFLLCLPWLGYQYVWEMEKYLRHGQEKTLEGTTQALATALHERPKLFDSQASFLTQVEKGRDLY AYPLSGPIQLDGKLADWSSYRHRALNYGDDYQIYKRNENQPLNLSFTHMVGKYAGYLYAFFEVSDPHVVYRGKNSLSIDN NDHIAIATLAPDGKFRRYIVATTQDGWISAFELPEDPSLSTPVTPEVKIQGKWTKSKQGYNVELRIPLNMVGSKLGFAVY DVNDKKSRVLDAVVGTSAIDDVSKLGTVLVPSPEIESIIKGMSHNSSRIWVVDKHGRVLAKSGDIRSDNSVWSRANVDND DNSGWEQFKHKYLHPLYYKILTTPAKDFIDSLQDSTVLQGSHISKALNGEQGSTWRLTPDNKAVVLAAASPIWIDDKVMG VVIAEETTHGIRTLRNKALEKLFNVILTIMSMGTLALFFFASNISSRIRKLRDEAEQAIDSQGRIKNEIQGSKVRDEIGD LSRSFASIVSRLSQYTHYLENMSSRLSHELRTPVAVVRSSLEHLGLQQLSPDSRKYVDRAQEGVNRLNMILNNMSEATRL EASLSHADTTVFPLEKVINGCMQGYQMTYPNQAFELDITQESIAVLGVPEYIAQLMDKLIANAQEFSHPDSSINVVLKLK NKFAVLSVSNQGPALPENMAEQIFESMVSVRAQKAQDKPHLGLGLYIARLICQFHDGKISACNTQDKAGNVSGVKITIKL PISKEGL
Sequences:
>Translated_727_residues MFNLPIGLRTKVAVLSLFLLCLPWLGYQYVWEMEKYLRHGQEKTLEGTTQALATALHERPKLFDSQASFLTQVEKGRDLY AYPLSGPIQLDGKLADWSSYRHRALNYGDDYQIYKRNENQPLNLSFTHMVGKYAGYLYAFFEVSDPHVVYRGKNSLSIDN NDHIAIATLAPDGKFRRYIVATTQDGWISAFELPEDPSLSTPVTPEVKIQGKWTKSKQGYNVELRIPLNMVGSKLGFAVY DVNDKKSRVLDAVVGTSAIDDVSKLGTVLVPSPEIESIIKGMSHNSSRIWVVDKHGRVLAKSGDIRSDNSVWSRANVDND DNSGWEQFKHKYLHPLYYKILTTPAKDFIDSLQDSTVLQGSHISKALNGEQGSTWRLTPDNKAVVLAAASPIWIDDKVMG VVIAEETTHGIRTLRNKALEKLFNVILTIMSMGTLALFFFASNISSRIRKLRDEAEQAIDSQGRIKNEIQGSKVRDEIGD LSRSFASIVSRLSQYTHYLENMSSRLSHELRTPVAVVRSSLEHLGLQQLSPDSRKYVDRAQEGVNRLNMILNNMSEATRL EASLSHADTTVFPLEKVINGCMQGYQMTYPNQAFELDITQESIAVLGVPEYIAQLMDKLIANAQEFSHPDSSINVVLKLK NKFAVLSVSNQGPALPENMAEQIFESMVSVRAQKAQDKPHLGLGLYIARLICQFHDGKISACNTQDKAGNVSGVKITIKL PISKEGL >Mature_727_residues MFNLPIGLRTKVAVLSLFLLCLPWLGYQYVWEMEKYLRHGQEKTLEGTTQALATALHERPKLFDSQASFLTQVEKGRDLY AYPLSGPIQLDGKLADWSSYRHRALNYGDDYQIYKRNENQPLNLSFTHMVGKYAGYLYAFFEVSDPHVVYRGKNSLSIDN NDHIAIATLAPDGKFRRYIVATTQDGWISAFELPEDPSLSTPVTPEVKIQGKWTKSKQGYNVELRIPLNMVGSKLGFAVY DVNDKKSRVLDAVVGTSAIDDVSKLGTVLVPSPEIESIIKGMSHNSSRIWVVDKHGRVLAKSGDIRSDNSVWSRANVDND DNSGWEQFKHKYLHPLYYKILTTPAKDFIDSLQDSTVLQGSHISKALNGEQGSTWRLTPDNKAVVLAAASPIWIDDKVMG VVIAEETTHGIRTLRNKALEKLFNVILTIMSMGTLALFFFASNISSRIRKLRDEAEQAIDSQGRIKNEIQGSKVRDEIGD LSRSFASIVSRLSQYTHYLENMSSRLSHELRTPVAVVRSSLEHLGLQQLSPDSRKYVDRAQEGVNRLNMILNNMSEATRL EASLSHADTTVFPLEKVINGCMQGYQMTYPNQAFELDITQESIAVLGVPEYIAQLMDKLIANAQEFSHPDSSINVVLKLK NKFAVLSVSNQGPALPENMAEQIFESMVSVRAQKAQDKPHLGLGLYIARLICQFHDGKISACNTQDKAGNVSGVKITIKL PISKEGL
Specific function: Member of a two-component regulatory system ChvG(ExoS)/ChvI involved in regulating the production of succinoglycan. Activates ChvI by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=256, Percent_Identity=24.609375, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI1786912, Length=238, Percent_Identity=24.7899159663866, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790346, Length=285, Percent_Identity=23.5087719298246, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 81290; Mature: 81290
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNLPIGLRTKVAVLSLFLLCLPWLGYQYVWEMEKYLRHGQEKTLEGTTQALATALHERP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC KLFDSQASFLTQVEKGRDLYAYPLSGPIQLDGKLADWSSYRHRALNYGDDYQIYKRNENQ HHHHHHHHHHHHHHCCCCEEEECCCCCEEECCEECCHHHHHHHHCCCCCCEEEEECCCCC PLNLSFTHMVGKYAGYLYAFFEVSDPHVVYRGKNSLSIDNNDHIAIATLAPDGKFRRYIV CCCEEHHHHHHHHHCEEEEEEEECCCEEEEECCCCEEECCCCCEEEEEECCCCCEEEEEE ATTQDGWISAFELPEDPSLSTPVTPEVKIQGKWTKSKQGYNVELRIPLNMVGSKLGFAVY EECCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECHHHHCHHHCEEEE DVNDKKSRVLDAVVGTSAIDDVSKLGTVLVPSPEIESIIKGMSHNSSRIWVVDKHGRVLA ECCCHHHHHHHHHHCCHHHHHHHHCCEEECCCCCHHHHHHCCCCCCCEEEEEECCCEEEE KSGDIRSDNSVWSRANVDNDDNSGWEQFKHKYLHPLYYKILTTPAKDFIDSLQDSTVLQG ECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEECC SHISKALNGEQGSTWRLTPDNKAVVLAAASPIWIDDKVMGVVIAEETTHGIRTLRNKALE HHHHHHHCCCCCCEEEECCCCCEEEEEECCCEEECCCEEEEEEECCCHHHHHHHHHHHHH KLFNVILTIMSMGTLALFFFASNISSRIRKLRDEAEQAIDSQGRIKNEIQGSKVRDEIGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHH LSRSFASIVSRLSQYTHYLENMSSRLSHELRTPVAVVRSSLEHLGLQQLSPDSRKYVDRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHCCCCHHHHHHHH QEGVNRLNMILNNMSEATRLEASLSHADTTVFPLEKVINGCMQGYQMTYPNQAFELDITQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCEEEEEECH ESIAVLGVPEYIAQLMDKLIANAQEFSHPDSSINVVLKLKNKFAVLSVSNQGPALPENMA HHHEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEECCCCCCCCHHHH EQIFESMVSVRAQKAQDKPHLGLGLYIARLICQFHDGKISACNTQDKAGNVSGVKITIKL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEE PISKEGL CCCCCCC >Mature Secondary Structure MFNLPIGLRTKVAVLSLFLLCLPWLGYQYVWEMEKYLRHGQEKTLEGTTQALATALHERP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC KLFDSQASFLTQVEKGRDLYAYPLSGPIQLDGKLADWSSYRHRALNYGDDYQIYKRNENQ HHHHHHHHHHHHHHCCCCEEEECCCCCEEECCEECCHHHHHHHHCCCCCCEEEEECCCCC PLNLSFTHMVGKYAGYLYAFFEVSDPHVVYRGKNSLSIDNNDHIAIATLAPDGKFRRYIV CCCEEHHHHHHHHHCEEEEEEEECCCEEEEECCCCEEECCCCCEEEEEECCCCCEEEEEE ATTQDGWISAFELPEDPSLSTPVTPEVKIQGKWTKSKQGYNVELRIPLNMVGSKLGFAVY EECCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEECHHHHCHHHCEEEE DVNDKKSRVLDAVVGTSAIDDVSKLGTVLVPSPEIESIIKGMSHNSSRIWVVDKHGRVLA ECCCHHHHHHHHHHCCHHHHHHHHCCEEECCCCCHHHHHHCCCCCCCEEEEEECCCEEEE KSGDIRSDNSVWSRANVDNDDNSGWEQFKHKYLHPLYYKILTTPAKDFIDSLQDSTVLQG ECCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEECC SHISKALNGEQGSTWRLTPDNKAVVLAAASPIWIDDKVMGVVIAEETTHGIRTLRNKALE HHHHHHHCCCCCCEEEECCCCCEEEEEECCCEEECCCEEEEEEECCCHHHHHHHHHHHHH KLFNVILTIMSMGTLALFFFASNISSRIRKLRDEAEQAIDSQGRIKNEIQGSKVRDEIGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHH LSRSFASIVSRLSQYTHYLENMSSRLSHELRTPVAVVRSSLEHLGLQQLSPDSRKYVDRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHCCCCHHHHHHHH QEGVNRLNMILNNMSEATRLEASLSHADTTVFPLEKVINGCMQGYQMTYPNQAFELDITQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEECCCCCEEEEEECH ESIAVLGVPEYIAQLMDKLIANAQEFSHPDSSINVVLKLKNKFAVLSVSNQGPALPENMA HHHEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCEEEEEECCCCCCCCHHHH EQIFESMVSVRAQKAQDKPHLGLGLYIARLICQFHDGKISACNTQDKAGNVSGVKITIKL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEE PISKEGL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9422587; 11481430; 7559334 [H]