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The map label for this gene is yqeZ [H]

Identifier: 167623574

GI number: 167623574

Start: 1971751

End: 1973262

Strand: Reverse

Name: yqeZ [H]

Synonym: Shal_1643

Alternate gene names: 167623574

Gene position: 1973262-1971751 (Counterclockwise)

Preceding gene: 167623584

Following gene: 167623573

Centisome position: 37.75

GC content: 49.07

Gene sequence:

>1512_bases
TTGCTATCAAACAGACTGCCCGCCTTTATATCGCAACTCCTGATTGCAGCTTTACTGCAACTGACATTTTGTTGCGGTTT
AAGCTATGCCACCCCCACCCAAGAGTCAGCAATCACAGCAAGACCTCAAGTGTTAGTTCTCGCGTTTGAAGGCGCCATTG
GTCCTGCGACTAGCGAATATTTAACCCAAGGTATCGAGCGAGCAAACGTAAACGCTGCACTAGGAAATGGCGAAATAGAG
CTCATTGTTATCGTGATGGACACCCCAGGTGGCCTTGTCTCTAGCCTAAGAGATATCAATCAAAGCATCTTAAATTCCTC
TGTCCCTATCGCCTGTTTAGTCGCGCCCCCCGGTGCGAGAGCGGCGAGCGCCGGCACCTATATTCTGTACGCATGTCATA
TCGCCGCCATGGCCGAAGCCACCACCTTAGGCGCAGCAACGCCGGTTAGTATTGGCCCAGGAAGTGCCCCGACACCTGCG
CCAAAACAAGATCCAAAAGATGATGATAAGTCCGCTCCAGCCACGCCCAGCGCAATGGAGAAAAAAATCCTCAACGATTC
CATCGCCTATATACGTGCACTGGCACAGCTTCGCGGCCGGAATGAGCAATGGGCGGAACTCGCTGTCAAAGAGGCTGCCA
CCCTCACCGCGAATGAAGCGCTCGAAATGAACGTCATTAATCTCATCAGCCCCGATGCGCCGCGGCTAGTCGCCGAACTG
ACAGGCTGGCAAGTTGAGATAGATCATCAACAACTGACATTGGCATTAGATAATGCCGAACTGCATTATTTAAAACCCGA
TTGGCGTAACCGTATTATCTCTACGGTTACCAATCCCAATGTTGCTTACATTTTAATGTTGATCGGAATTTACGGGATTT
TGCTTGAGTTCTATAGTCCCGGAATAGGGATTGCGGGGATCACAGGTGCCATAAGCTTACTGGTTGCCTTATATGCGTTT
CAGATGCTGCCCATTAGCTATGCTGGATTAGGTCTGTTACTACTCGGGATTGCTCTGATAACCATTGAGTCATTTGCTCC
AAGCTTTGGCCTGTTTGGAATTGGTGGCATTGTCGCTTTTGCGGTTGGATCGCTATTTTTACTCGATACAAAAACCGATC
ATTTTGCGCTTTCTCTGCCACTCATCGCCGCGGTATCGGTCACCGTAACCTTAGGCTCCCTGCTAGTGCTTGGTACATTG
TGGCGGAATCGAAAATCCCCCATCGTCAGTGGTGATGGACAAATTGTTGGCCAGCTTGCGCTGGTAACTGATGACTTTAC
ATCGAGTATGCAGCTAACAAATGCATCTGATACTGATGTTGTTAATGTAACAGGCAATGCTCAGCCGACATATAAAGGCT
TTGTGCTACTTCAGGGTGAGGTCTGGGCAGCAAGCTCACTATCACCACTAAAAAAGGCTCAGCAAGTCACCGTCGTCGTG
CGTCATGACCTTTCACTGGAGGTTGAACTGTCTCCAGTTTCTAATCAACAAGTACTAACCAAGAAGTGCTAA

Upstream 100 bases:

>100_bases
TCGGTAATACAGTGAATGAACCACGCGGACGCTATCTGTAACGCTAAATAGCAAAAGCTACACTAAACTTAATTGTAAGC
CTGAATATTGGTTACTCATT

Downstream 100 bases:

>100_bases
ATAGCTAAGGAGTCGAATATGGAACCCATTTTCGGAAATGGTAGCATCTTTATAGGCGTACTCACCTTCCTTATTGTCGG
CTTGCTGGTCAGCATGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MLSNRLPAFISQLLIAALLQLTFCCGLSYATPTQESAITARPQVLVLAFEGAIGPATSEYLTQGIERANVNAALGNGEIE
LIVIVMDTPGGLVSSLRDINQSILNSSVPIACLVAPPGARAASAGTYILYACHIAAMAEATTLGAATPVSIGPGSAPTPA
PKQDPKDDDKSAPATPSAMEKKILNDSIAYIRALAQLRGRNEQWAELAVKEAATLTANEALEMNVINLISPDAPRLVAEL
TGWQVEIDHQQLTLALDNAELHYLKPDWRNRIISTVTNPNVAYILMLIGIYGILLEFYSPGIGIAGITGAISLLVALYAF
QMLPISYAGLGLLLLGIALITIESFAPSFGLFGIGGIVAFAVGSLFLLDTKTDHFALSLPLIAAVSVTVTLGSLLVLGTL
WRNRKSPIVSGDGQIVGQLALVTDDFTSSMQLTNASDTDVVNVTGNAQPTYKGFVLLQGEVWAASSLSPLKKAQQVTVVV
RHDLSLEVELSPVSNQQVLTKKC

Sequences:

>Translated_503_residues
MLSNRLPAFISQLLIAALLQLTFCCGLSYATPTQESAITARPQVLVLAFEGAIGPATSEYLTQGIERANVNAALGNGEIE
LIVIVMDTPGGLVSSLRDINQSILNSSVPIACLVAPPGARAASAGTYILYACHIAAMAEATTLGAATPVSIGPGSAPTPA
PKQDPKDDDKSAPATPSAMEKKILNDSIAYIRALAQLRGRNEQWAELAVKEAATLTANEALEMNVINLISPDAPRLVAEL
TGWQVEIDHQQLTLALDNAELHYLKPDWRNRIISTVTNPNVAYILMLIGIYGILLEFYSPGIGIAGITGAISLLVALYAF
QMLPISYAGLGLLLLGIALITIESFAPSFGLFGIGGIVAFAVGSLFLLDTKTDHFALSLPLIAAVSVTVTLGSLLVLGTL
WRNRKSPIVSGDGQIVGQLALVTDDFTSSMQLTNASDTDVVNVTGNAQPTYKGFVLLQGEVWAASSLSPLKKAQQVTVVV
RHDLSLEVELSPVSNQQVLTKKC
>Mature_503_residues
MLSNRLPAFISQLLIAALLQLTFCCGLSYATPTQESAITARPQVLVLAFEGAIGPATSEYLTQGIERANVNAALGNGEIE
LIVIVMDTPGGLVSSLRDINQSILNSSVPIACLVAPPGARAASAGTYILYACHIAAMAEATTLGAATPVSIGPGSAPTPA
PKQDPKDDDKSAPATPSAMEKKILNDSIAYIRALAQLRGRNEQWAELAVKEAATLTANEALEMNVINLISPDAPRLVAEL
TGWQVEIDHQQLTLALDNAELHYLKPDWRNRIISTVTNPNVAYILMLIGIYGILLEFYSPGIGIAGITGAISLLVALYAF
QMLPISYAGLGLLLLGIALITIESFAPSFGLFGIGGIVAFAVGSLFLLDTKTDHFALSLPLIAAVSVTVTLGSLLVLGTL
WRNRKSPIVSGDGQIVGQLALVTDDFTSSMQLTNASDTDVVNVTGNAQPTYKGFVLLQGEVWAASSLSPLKKAQQVTVVV
RHDLSLEVELSPVSNQQVLTKKC

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 53038; Mature: 53038

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNRLPAFISQLLIAALLQLTFCCGLSYATPTQESAITARPQVLVLAFEGAIGPATSEY
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCHHH
LTQGIERANVNAALGNGEIELIVIVMDTPGGLVSSLRDINQSILNSSVPIACLVAPPGAR
HHHHHHHCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
AASAGTYILYACHIAAMAEATTLGAATPVSIGPGSAPTPAPKQDPKDDDKSAPATPSAME
CCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
KKILNDSIAYIRALAQLRGRNEQWAELAVKEAATLTANEALEMNVINLISPDAPRLVAEL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHH
TGWQVEIDHQQLTLALDNAELHYLKPDWRNRIISTVTNPNVAYILMLIGIYGILLEFYSP
CCCEEEECCCEEEEEEECCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
GIGIAGITGAISLLVALYAFQMLPISYAGLGLLLLGIALITIESFAPSFGLFGIGGIVAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
AVGSLFLLDTKTDHFALSLPLIAAVSVTVTLGSLLVLGTLWRNRKSPIVSGDGQIVGQLA
HHCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEE
LVTDDFTSSMQLTNASDTDVVNVTGNAQPTYKGFVLLQGEVWAASSLSPLKKAQQVTVVV
EEECCCCCCEEECCCCCCCEEEEECCCCCCCCEEEEEECCEECCCCCHHHHHHHEEEEEE
RHDLSLEVELSPVSNQQVLTKKC
EECCEEEEEECCCCCCCHHCCCC
>Mature Secondary Structure
MLSNRLPAFISQLLIAALLQLTFCCGLSYATPTQESAITARPQVLVLAFEGAIGPATSEY
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCEEEEEEECCCCCCCCHHH
LTQGIERANVNAALGNGEIELIVIVMDTPGGLVSSLRDINQSILNSSVPIACLVAPPGAR
HHHHHHHCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCC
AASAGTYILYACHIAAMAEATTLGAATPVSIGPGSAPTPAPKQDPKDDDKSAPATPSAME
CCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
KKILNDSIAYIRALAQLRGRNEQWAELAVKEAATLTANEALEMNVINLISPDAPRLVAEL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHH
TGWQVEIDHQQLTLALDNAELHYLKPDWRNRIISTVTNPNVAYILMLIGIYGILLEFYSP
CCCEEEECCCEEEEEEECCEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
GIGIAGITGAISLLVALYAFQMLPISYAGLGLLLLGIALITIESFAPSFGLFGIGGIVAF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
AVGSLFLLDTKTDHFALSLPLIAAVSVTVTLGSLLVLGTLWRNRKSPIVSGDGQIVGQLA
HHCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEE
LVTDDFTSSMQLTNASDTDVVNVTGNAQPTYKGFVLLQGEVWAASSLSPLKKAQQVTVVV
EEECCCCCCEEECCCCCCCEEEEECCCCCCCCEEEEEECCEECCCCCHHHHHHHEEEEEE
RHDLSLEVELSPVSNQQVLTKKC
EECCEEEEEECCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]