Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623570

Identifier: 167623570

GI number: 167623570

Start: 1967776

End: 1968207

Strand: Reverse

Name: 167623570

Synonym: Shal_1639

Alternate gene names: NA

Gene position: 1968207-1967776 (Counterclockwise)

Preceding gene: 167623571

Following gene: 167623569

Centisome position: 37.66

GC content: 46.76

Gene sequence:

>432_bases
ATGACTAACATAAAAGAATCAACTGTTAAGCCAAGTCACCCGTTAACTGGCGGCTGTCTATGTAACAAGGTTCGATATCG
CGTAACTGGTCAGCCCTTCGATGCCGACTTTTGCCATTGTCGCCATTGCCAAAAAAGTACCGGCTCAGTAGTGGGCGCAT
GGATGGATTTTAAACGGGAGCAAGTTGCCTGGCTTACTGAGCCACCAAAAGAATTTGCCTCATCCGAGCATGTTCGACGC
GGGTTTTGTCAGCATTGCGGCAGCCAAGTAAGCTTTCGCGATCTGCGTTATGGCCAATATCTCACCTTAAGTATCACCAC
ACTCGATGAACCAAACACCATCAAACCTAACTACCATATCTACACCGACAGCCAACTTGAATGGTTTAACATTCAAGATG
ACTGTCCAAGGTACGCTAAGAACCGAAGATGA

Upstream 100 bases:

>100_bases
CATTCCCCTGAAGCGCAGCGCCCTACCGCTTAAAACCTAGTATCTAAGCCACTGATGTGTTTAGCTATCTGTATTCTTGG
TAAAACTTTCAAGCAGCAAA

Downstream 100 bases:

>100_bases
AATGAAGGTTCTAGGCTTAGGTATTAGAGGTTCTGGGTTCTGGGCTAGGCAAAATAAATCAGAATTTTAACTGATACTAG
GTTTGTCTTTTCCTAGGACC

Product: glutathione-dependent formaldehyde-activating protein

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde-Activating Family; Glutathione-Dependent Formaldehyde-Activating Protein GFA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTNIKESTVKPSHPLTGGCLCNKVRYRVTGQPFDADFCHCRHCQKSTGSVVGAWMDFKREQVAWLTEPPKEFASSEHVRR
GFCQHCGSQVSFRDLRYGQYLTLSITTLDEPNTIKPNYHIYTDSQLEWFNIQDDCPRYAKNRR

Sequences:

>Translated_143_residues
MTNIKESTVKPSHPLTGGCLCNKVRYRVTGQPFDADFCHCRHCQKSTGSVVGAWMDFKREQVAWLTEPPKEFASSEHVRR
GFCQHCGSQVSFRDLRYGQYLTLSITTLDEPNTIKPNYHIYTDSQLEWFNIQDDCPRYAKNRR
>Mature_142_residues
TNIKESTVKPSHPLTGGCLCNKVRYRVTGQPFDADFCHCRHCQKSTGSVVGAWMDFKREQVAWLTEPPKEFASSEHVRRG
FCQHCGSQVSFRDLRYGQYLTLSITTLDEPNTIKPNYHIYTDSQLEWFNIQDDCPRYAKNRR

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16610; Mature: 16479

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNIKESTVKPSHPLTGGCLCNKVRYRVTGQPFDADFCHCRHCQKSTGSVVGAWMDFKRE
CCCCCCCCCCCCCCCCCCCEECCEEEEECCCCCCCCHHHHHHHCCCCCCEEEHHHHCCCH
QVAWLTEPPKEFASSEHVRRGFCQHCGSQVSFRDLRYGQYLTLSITTLDEPNTIKPNYHI
HEEECCCCHHHHHCHHHHHHHHHHHCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCEEE
YTDSQLEWFNIQDDCPRYAKNRR
EECCCEEEECCCCCCHHHHCCCC
>Mature Secondary Structure 
TNIKESTVKPSHPLTGGCLCNKVRYRVTGQPFDADFCHCRHCQKSTGSVVGAWMDFKRE
CCCCCCCCCCCCCCCCCCEECCEEEEECCCCCCCCHHHHHHHCCCCCCEEEHHHHCCCH
QVAWLTEPPKEFASSEHVRRGFCQHCGSQVSFRDLRYGQYLTLSITTLDEPNTIKPNYHI
HEEECCCCHHHHHCHHHHHHHHHHHCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCEEE
YTDSQLEWFNIQDDCPRYAKNRR
EECCCEEEECCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA