Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623569

Identifier: 167623569

GI number: 167623569

Start: 1966988

End: 1967530

Strand: Reverse

Name: 167623569

Synonym: Shal_1638

Alternate gene names: NA

Gene position: 1967530-1966988 (Counterclockwise)

Preceding gene: 167623570

Following gene: 167623565

Centisome position: 37.64

GC content: 45.67

Gene sequence:

>543_bases
ATGCGCTTAACATCACGGCTTTCAAAGCATGCTTCTTCAAAGCTGATACTTTTAAAACTGCCACTTTCAAAGCTCACTCT
TTCAAAAGCTGGAAGCATCAGATCCCGCCTGACGGCTTTGTCTATTATTACCTTACTGAGTACCTTGCTCAGTGCCTGTA
GTAGTCAGCCCGATATCGAACCCGAAAAATTTGCAGGGCAAGTTAGCGACTCTTTTAGAACCGATATCAAGAGTAATGGC
TTAAAGTTATTTACCTACCGCGCCATTCTCACTATGGCAACGCCGCAAAATCAGACTCTGCCACACGAGGTTCGCTCAAA
CCAGAAGAAACGCTCTCGCTCGAAGCAGCGTTATCAAGGGCCGGATTTAACAATGTGGACTGAAAAGATTGAGCACGGCT
TGCAGCAAACCATCAAGATGACAGGCTATTGCAAAGAGGGATATATAGAGCTCAGTCGTACGATTCAGTATGATCGCGGC
ACTATTCGCGGTGAGTGCAATGATGGTGCCGATGAAGCGGATGTAGCCAAGTTTAATTCTTAA

Upstream 100 bases:

>100_bases
CTAACCCATGAACTGTAAAATCCTGTAATCTCACTGCTAACTTACTTCAATATACGTTATGCTGCCCCGTATAAACCAAA
AACTAGAACAAAAAATCCCT

Downstream 100 bases:

>100_bases
AAATGTTATTAAACAACTGAAAGGACAGCTTATTATCTCTGCCCTTTCAATCTGCTCTTTACCCCATTTCAACCAGCCCT
TTAAAACTGTGCTTTAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRLTSRLSKHASSKLILLKLPLSKLTLSKAGSIRSRLTALSIITLLSTLLSACSSQPDIEPEKFAGQVSDSFRTDIKSNG
LKLFTYRAILTMATPQNQTLPHEVRSNQKKRSRSKQRYQGPDLTMWTEKIEHGLQQTIKMTGYCKEGYIELSRTIQYDRG
TIRGECNDGADEADVAKFNS

Sequences:

>Translated_180_residues
MRLTSRLSKHASSKLILLKLPLSKLTLSKAGSIRSRLTALSIITLLSTLLSACSSQPDIEPEKFAGQVSDSFRTDIKSNG
LKLFTYRAILTMATPQNQTLPHEVRSNQKKRSRSKQRYQGPDLTMWTEKIEHGLQQTIKMTGYCKEGYIELSRTIQYDRG
TIRGECNDGADEADVAKFNS
>Mature_180_residues
MRLTSRLSKHASSKLILLKLPLSKLTLSKAGSIRSRLTALSIITLLSTLLSACSSQPDIEPEKFAGQVSDSFRTDIKSNG
LKLFTYRAILTMATPQNQTLPHEVRSNQKKRSRSKQRYQGPDLTMWTEKIEHGLQQTIKMTGYCKEGYIELSRTIQYDRG
TIRGECNDGADEADVAKFNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20197; Mature: 20197

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTSRLSKHASSKLILLKLPLSKLTLSKAGSIRSRLTALSIITLLSTLLSACSSQPDIE
CCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PEKFAGQVSDSFRTDIKSNGLKLFTYRAILTMATPQNQTLPHEVRSNQKKRSRSKQRYQG
HHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDLTMWTEKIEHGLQQTIKMTGYCKEGYIELSRTIQYDRGTIRGECNDGADEADVAKFNS
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MRLTSRLSKHASSKLILLKLPLSKLTLSKAGSIRSRLTALSIITLLSTLLSACSSQPDIE
CCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PEKFAGQVSDSFRTDIKSNGLKLFTYRAILTMATPQNQTLPHEVRSNQKKRSRSKQRYQG
HHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDLTMWTEKIEHGLQQTIKMTGYCKEGYIELSRTIQYDRGTIRGECNDGADEADVAKFNS
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA