Click here to switch to the map view.

The map label for this gene is alx [H]

Identifier: 167623564

GI number: 167623564

Start: 1959977

End: 1960939

Strand: Reverse

Name: alx [H]

Synonym: Shal_1633

Alternate gene names: 167623564

Gene position: 1960939-1959977 (Counterclockwise)

Preceding gene: 167623565

Following gene: 167623563

Centisome position: 37.52

GC content: 44.34

Gene sequence:

>963_bases
ATGTTCTTAAGTGAACTCTTTTCAGGCTATCAAGGCCTAGTCTTTCTCACTCTATTGATGCTTGGCATCGATTTATTACT
CACAAGAGGCAGGATCAGTTTTCGTTCTGCCGCAGCTTGGAGTGTGTTCTGGTTTTCACTGGCTTTCTTGTTTGCTGGCG
CTATCTACCTCTTTTGGCCAGAGATGTCGCCAACTAGCCCACTCTCTTCAAGCGAAGCTAGCACAGCGTTTATCACTGGT
TATCTTCTTGAAAAGTCACTGAGTGTCGATAACCTATTTGTTTTCGCGCTAATCTTTGCTCAATTCAATGTACCAGACAA
AAACGTCCCGCGGATCCTGATGTTAGGTATCGTGGGTGCATTAGTATTGCGCGGTATCATGATTTCAGTCGGCGCTCCAC
TAATAGCACAGTTCCACATGATACTTTATCTGTTCGGTTTCTTCCTGATTTGGACAGGTGTGCAAATGTGGCGTCAGCAT
GATCAAGAGAGCTCATCGTTTTCAGACAGTTTTGCCGTTCGTTTGGTGAAGAAATTTATGCGGTTCAGCCCTGACTATCA
TGGGAATAAGCTCTTTATCCGCGATAACATTGGGATATTGGCAACGCCAATGCTAGTCGTTGTCACGGTCATTGCGATGA
CTGACGTGATGTTCGCCTTAGACTCGATCCCTGCAATCTTTGCGGTAACACAAGAGGCTTACTTGGTACTTGCTGCAAAC
GTCTTTGCCTTATTAGGCCTACGTTCGCTGTACTTTGTTCTAGGTGGTATGTTGAGTAAATTTGCTTATTTGCATCATAC
ATTAGCATTTATGCTGTGCTTTATTGGTACCAAGATGTTACTTATTGACACCCCGTTTGCTATCGCAACGTCTGTTTCTC
TTGGGGTTATCCTAGCTTCGCTGGCAGTCGGAATTGGTGCATCCATTTGGAAGCAACACCAATTGGAAAAAACGACGTTA
TAA

Upstream 100 bases:

>100_bases
TTTGACAAGACCAACAACACGTATTTGCTTTTACTATTTTAGCTATGCGGTTGGTCAGGTGTATCCCACTTTTCTGTGCC
ATCCGCCTGTCGGAGGTATT

Downstream 100 bases:

>100_bases
ATCTATATAGCCAACTCGGCATAAGCTTTGGTATGTAAGTCTGAAAGATGCTGTAGGTAGGCATAATCACAAACTTCGAT
GACAAGGATGTCATCGCAGC

Product: integral membrane protein TerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MFLSELFSGYQGLVFLTLLMLGIDLLLTRGRISFRSAAAWSVFWFSLAFLFAGAIYLFWPEMSPTSPLSSSEASTAFITG
YLLEKSLSVDNLFVFALIFAQFNVPDKNVPRILMLGIVGALVLRGIMISVGAPLIAQFHMILYLFGFFLIWTGVQMWRQH
DQESSSFSDSFAVRLVKKFMRFSPDYHGNKLFIRDNIGILATPMLVVVTVIAMTDVMFALDSIPAIFAVTQEAYLVLAAN
VFALLGLRSLYFVLGGMLSKFAYLHHTLAFMLCFIGTKMLLIDTPFAIATSVSLGVILASLAVGIGASIWKQHQLEKTTL

Sequences:

>Translated_320_residues
MFLSELFSGYQGLVFLTLLMLGIDLLLTRGRISFRSAAAWSVFWFSLAFLFAGAIYLFWPEMSPTSPLSSSEASTAFITG
YLLEKSLSVDNLFVFALIFAQFNVPDKNVPRILMLGIVGALVLRGIMISVGAPLIAQFHMILYLFGFFLIWTGVQMWRQH
DQESSSFSDSFAVRLVKKFMRFSPDYHGNKLFIRDNIGILATPMLVVVTVIAMTDVMFALDSIPAIFAVTQEAYLVLAAN
VFALLGLRSLYFVLGGMLSKFAYLHHTLAFMLCFIGTKMLLIDTPFAIATSVSLGVILASLAVGIGASIWKQHQLEKTTL
>Mature_320_residues
MFLSELFSGYQGLVFLTLLMLGIDLLLTRGRISFRSAAAWSVFWFSLAFLFAGAIYLFWPEMSPTSPLSSSEASTAFITG
YLLEKSLSVDNLFVFALIFAQFNVPDKNVPRILMLGIVGALVLRGIMISVGAPLIAQFHMILYLFGFFLIWTGVQMWRQH
DQESSSFSDSFAVRLVKKFMRFSPDYHGNKLFIRDNIGILATPMLVVVTVIAMTDVMFALDSIPAIFAVTQEAYLVLAAN
VFALLGLRSLYFVLGGMLSKFAYLHHTLAFMLCFIGTKMLLIDTPFAIATSVSLGVILASLAVGIGASIWKQHQLEKTTL

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

Organism=Escherichia coli, GI48994922, Length=313, Percent_Identity=41.5335463258786, Blast_Score=228, Evalue=4e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005496
- InterPro:   IPR022369 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 35485; Mature: 35485

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLSELFSGYQGLVFLTLLMLGIDLLLTRGRISFRSAAAWSVFWFSLAFLFAGAIYLFWP
CCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEC
EMSPTSPLSSSEASTAFITGYLLEKSLSVDNLFVFALIFAQFNVPDKNVPRILMLGIVGA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LVLRGIMISVGAPLIAQFHMILYLFGFFLIWTGVQMWRQHDQESSSFSDSFAVRLVKKFM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RFSPDYHGNKLFIRDNIGILATPMLVVVTVIAMTDVMFALDSIPAIFAVTQEAYLVLAAN
HCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VFALLGLRSLYFVLGGMLSKFAYLHHTLAFMLCFIGTKMLLIDTPFAIATSVSLGVILAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHH
LAVGIGASIWKQHQLEKTTL
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLSELFSGYQGLVFLTLLMLGIDLLLTRGRISFRSAAAWSVFWFSLAFLFAGAIYLFWP
CCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEC
EMSPTSPLSSSEASTAFITGYLLEKSLSVDNLFVFALIFAQFNVPDKNVPRILMLGIVGA
CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
LVLRGIMISVGAPLIAQFHMILYLFGFFLIWTGVQMWRQHDQESSSFSDSFAVRLVKKFM
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RFSPDYHGNKLFIRDNIGILATPMLVVVTVIAMTDVMFALDSIPAIFAVTQEAYLVLAAN
HCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VFALLGLRSLYFVLGGMLSKFAYLHHTLAFMLCFIGTKMLLIDTPFAIATSVSLGVILAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHH
LAVGIGASIWKQHQLEKTTL
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]