| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is galU [H]
Identifier: 167623461
GI number: 167623461
Start: 1845436
End: 1846344
Strand: Reverse
Name: galU [H]
Synonym: Shal_1530
Alternate gene names: 167623461
Gene position: 1846344-1845436 (Counterclockwise)
Preceding gene: 167623467
Following gene: 167623460
Centisome position: 35.32
GC content: 45.32
Gene sequence:
>909_bases ATGAAACAACATAAAATTCGCAAGGCAGTGATCCCAGTAGCAGGCTTAGGCACGCGTATGCTTCCAGCCACTAAAGCTAT CCCTAAAGAGATGCTGCCCGTTATGGACAAGCCGCTGATCCAATATGTTGTCAGCGAGGCTATTGCTGCTGGCATTAAAG AAATTGTCTTAGTGACCCATGCCAGTAAGAACTCTGTTGAAAATCACTTCGATACCAGCTTTGAATTAGAGACCCAACTT GAGCGTCGCGTAAAACGTCAGCTCTTAGCAGAAGTACAAGCTATCTGCCCTGACGACGTCACTATTATTAGTGTACGTCA GTCACAAGCAAAGGGCTTAGGTCATGCGATTTTATGTGCTAAAAGCATCATAGGTGACTCACCATTTGCCGTACTTTTAC CTGACGTACTAATTGATGACGCTAGCAGTGACCTAACTAAAGAAAACCTTGCCCAGATGGTCGCACTGTACAATGAAACT GAAGTCGGTCAAATCATGGTAGAAGGCGTGCCCCATGAGCTCGTTAACCAATACGGTATTGCCGATATCAACGGTAAAGA TTTGCAGCCAGGTGAGTCGCTACCGCTATCTCAACTGGTCGAGAAGCCTAGCATCGAAGATGCACCGTCTAACCTAGCCG TTGTCGGCCGTTATATATTACCTGCCGAAATCTGGACTTACTTAGCTAAGACTCCTGCTGGGGCTGGTGATGAAATTCAG CTTACCGACGCTATCGCAATGTTGATGGAAAACCAAACTGTCAACGCTTACTACATGCAAGGTAAAAGCCATGACTGTGG TAATAAGCTAGGCTATATGCAAGCTCATGTAGAACACGCGCTGCGCCATAAAGAAATTGGAACTGAGTTCGCCGAATATT TAAAGGCTATCGTTAAGACTCTTAAATAA
Upstream 100 bases:
>100_bases TTACAGCCCGTTTTCTACAATTCTTACCCAATGAATACTCATTTCAGTATAGAATGTAAGTTTGTGTGCCAATTCCTAAT TAGGAACAGATAGGATTAGA
Downstream 100 bases:
>100_bases TAGCCTCTTAAGTAACAGACGCTTGAGTAATAAACGCTTAGCGAATGTCTCTTGAACATCAGCCTAGATGAAAGGATTTT AAATAATGACGATTTTAGTT
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKQHKIRKAVIPVAGLGTRMLPATKAIPKEMLPVMDKPLIQYVVSEAIAAGIKEIVLVTHASKNSVENHFDTSFELETQL ERRVKRQLLAEVQAICPDDVTIISVRQSQAKGLGHAILCAKSIIGDSPFAVLLPDVLIDDASSDLTKENLAQMVALYNET EVGQIMVEGVPHELVNQYGIADINGKDLQPGESLPLSQLVEKPSIEDAPSNLAVVGRYILPAEIWTYLAKTPAGAGDEIQ LTDAIAMLMENQTVNAYYMQGKSHDCGNKLGYMQAHVEHALRHKEIGTEFAEYLKAIVKTLK
Sequences:
>Translated_302_residues MKQHKIRKAVIPVAGLGTRMLPATKAIPKEMLPVMDKPLIQYVVSEAIAAGIKEIVLVTHASKNSVENHFDTSFELETQL ERRVKRQLLAEVQAICPDDVTIISVRQSQAKGLGHAILCAKSIIGDSPFAVLLPDVLIDDASSDLTKENLAQMVALYNET EVGQIMVEGVPHELVNQYGIADINGKDLQPGESLPLSQLVEKPSIEDAPSNLAVVGRYILPAEIWTYLAKTPAGAGDEIQ LTDAIAMLMENQTVNAYYMQGKSHDCGNKLGYMQAHVEHALRHKEIGTEFAEYLKAIVKTLK >Mature_302_residues MKQHKIRKAVIPVAGLGTRMLPATKAIPKEMLPVMDKPLIQYVVSEAIAAGIKEIVLVTHASKNSVENHFDTSFELETQL ERRVKRQLLAEVQAICPDDVTIISVRQSQAKGLGHAILCAKSIIGDSPFAVLLPDVLIDDASSDLTKENLAQMVALYNET EVGQIMVEGVPHELVNQYGIADINGKDLQPGESLPLSQLVEKPSIEDAPSNLAVVGRYILPAEIWTYLAKTPAGAGDEIQ LTDAIAMLMENQTVNAYYMQGKSHDCGNKLGYMQAHVEHALRHKEIGTEFAEYLKAIVKTLK
Specific function: May play a role in stationary phase survival [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=291, Percent_Identity=68.0412371134021, Blast_Score=415, Evalue=1e-117, Organism=Escherichia coli, GI1788355, Length=287, Percent_Identity=57.1428571428571, Blast_Score=326, Evalue=1e-90,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 33057; Mature: 33057
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQHKIRKAVIPVAGLGTRMLPATKAIPKEMLPVMDKPLIQYVVSEAIAAGIKEIVLVTH CCCHHHHHHHCCHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC ASKNSVENHFDTSFELETQLERRVKRQLLAEVQAICPDDVTIISVRQSQAKGLGHAILCA CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHH KSIIGDSPFAVLLPDVLIDDASSDLTKENLAQMVALYNETEVGQIMVEGVPHELVNQYGI HHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCC ADINGKDLQPGESLPLSQLVEKPSIEDAPSNLAVVGRYILPAEIWTYLAKTPAGAGDEIQ CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH LTDAIAMLMENQTVNAYYMQGKSHDCGNKLGYMQAHVEHALRHKEIGTEFAEYLKAIVKT HHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LK CC >Mature Secondary Structure MKQHKIRKAVIPVAGLGTRMLPATKAIPKEMLPVMDKPLIQYVVSEAIAAGIKEIVLVTH CCCHHHHHHHCCHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC ASKNSVENHFDTSFELETQLERRVKRQLLAEVQAICPDDVTIISVRQSQAKGLGHAILCA CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHH KSIIGDSPFAVLLPDVLIDDASSDLTKENLAQMVALYNETEVGQIMVEGVPHELVNQYGI HHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCC ADINGKDLQPGESLPLSQLVEKPSIEDAPSNLAVVGRYILPAEIWTYLAKTPAGAGDEIQ CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH LTDAIAMLMENQTVNAYYMQGKSHDCGNKLGYMQAHVEHALRHKEIGTEFAEYLKAIVKT HHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]