Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is galU [H]

Identifier: 167623461

GI number: 167623461

Start: 1845436

End: 1846344

Strand: Reverse

Name: galU [H]

Synonym: Shal_1530

Alternate gene names: 167623461

Gene position: 1846344-1845436 (Counterclockwise)

Preceding gene: 167623467

Following gene: 167623460

Centisome position: 35.32

GC content: 45.32

Gene sequence:

>909_bases
ATGAAACAACATAAAATTCGCAAGGCAGTGATCCCAGTAGCAGGCTTAGGCACGCGTATGCTTCCAGCCACTAAAGCTAT
CCCTAAAGAGATGCTGCCCGTTATGGACAAGCCGCTGATCCAATATGTTGTCAGCGAGGCTATTGCTGCTGGCATTAAAG
AAATTGTCTTAGTGACCCATGCCAGTAAGAACTCTGTTGAAAATCACTTCGATACCAGCTTTGAATTAGAGACCCAACTT
GAGCGTCGCGTAAAACGTCAGCTCTTAGCAGAAGTACAAGCTATCTGCCCTGACGACGTCACTATTATTAGTGTACGTCA
GTCACAAGCAAAGGGCTTAGGTCATGCGATTTTATGTGCTAAAAGCATCATAGGTGACTCACCATTTGCCGTACTTTTAC
CTGACGTACTAATTGATGACGCTAGCAGTGACCTAACTAAAGAAAACCTTGCCCAGATGGTCGCACTGTACAATGAAACT
GAAGTCGGTCAAATCATGGTAGAAGGCGTGCCCCATGAGCTCGTTAACCAATACGGTATTGCCGATATCAACGGTAAAGA
TTTGCAGCCAGGTGAGTCGCTACCGCTATCTCAACTGGTCGAGAAGCCTAGCATCGAAGATGCACCGTCTAACCTAGCCG
TTGTCGGCCGTTATATATTACCTGCCGAAATCTGGACTTACTTAGCTAAGACTCCTGCTGGGGCTGGTGATGAAATTCAG
CTTACCGACGCTATCGCAATGTTGATGGAAAACCAAACTGTCAACGCTTACTACATGCAAGGTAAAAGCCATGACTGTGG
TAATAAGCTAGGCTATATGCAAGCTCATGTAGAACACGCGCTGCGCCATAAAGAAATTGGAACTGAGTTCGCCGAATATT
TAAAGGCTATCGTTAAGACTCTTAAATAA

Upstream 100 bases:

>100_bases
TTACAGCCCGTTTTCTACAATTCTTACCCAATGAATACTCATTTCAGTATAGAATGTAAGTTTGTGTGCCAATTCCTAAT
TAGGAACAGATAGGATTAGA

Downstream 100 bases:

>100_bases
TAGCCTCTTAAGTAACAGACGCTTGAGTAATAAACGCTTAGCGAATGTCTCTTGAACATCAGCCTAGATGAAAGGATTTT
AAATAATGACGATTTTAGTT

Product: UTP-glucose-1-phosphate uridylyltransferase

Products: NA

Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKQHKIRKAVIPVAGLGTRMLPATKAIPKEMLPVMDKPLIQYVVSEAIAAGIKEIVLVTHASKNSVENHFDTSFELETQL
ERRVKRQLLAEVQAICPDDVTIISVRQSQAKGLGHAILCAKSIIGDSPFAVLLPDVLIDDASSDLTKENLAQMVALYNET
EVGQIMVEGVPHELVNQYGIADINGKDLQPGESLPLSQLVEKPSIEDAPSNLAVVGRYILPAEIWTYLAKTPAGAGDEIQ
LTDAIAMLMENQTVNAYYMQGKSHDCGNKLGYMQAHVEHALRHKEIGTEFAEYLKAIVKTLK

Sequences:

>Translated_302_residues
MKQHKIRKAVIPVAGLGTRMLPATKAIPKEMLPVMDKPLIQYVVSEAIAAGIKEIVLVTHASKNSVENHFDTSFELETQL
ERRVKRQLLAEVQAICPDDVTIISVRQSQAKGLGHAILCAKSIIGDSPFAVLLPDVLIDDASSDLTKENLAQMVALYNET
EVGQIMVEGVPHELVNQYGIADINGKDLQPGESLPLSQLVEKPSIEDAPSNLAVVGRYILPAEIWTYLAKTPAGAGDEIQ
LTDAIAMLMENQTVNAYYMQGKSHDCGNKLGYMQAHVEHALRHKEIGTEFAEYLKAIVKTLK
>Mature_302_residues
MKQHKIRKAVIPVAGLGTRMLPATKAIPKEMLPVMDKPLIQYVVSEAIAAGIKEIVLVTHASKNSVENHFDTSFELETQL
ERRVKRQLLAEVQAICPDDVTIISVRQSQAKGLGHAILCAKSIIGDSPFAVLLPDVLIDDASSDLTKENLAQMVALYNET
EVGQIMVEGVPHELVNQYGIADINGKDLQPGESLPLSQLVEKPSIEDAPSNLAVVGRYILPAEIWTYLAKTPAGAGDEIQ
LTDAIAMLMENQTVNAYYMQGKSHDCGNKLGYMQAHVEHALRHKEIGTEFAEYLKAIVKTLK

Specific function: May play a role in stationary phase survival [H]

COG id: COG1210

COG function: function code M; UDP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDPGP type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787488, Length=291, Percent_Identity=68.0412371134021, Blast_Score=415, Evalue=1e-117,
Organism=Escherichia coli, GI1788355, Length=287, Percent_Identity=57.1428571428571, Blast_Score=326, Evalue=1e-90,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005771
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.9 [H]

Molecular weight: Translated: 33057; Mature: 33057

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQHKIRKAVIPVAGLGTRMLPATKAIPKEMLPVMDKPLIQYVVSEAIAAGIKEIVLVTH
CCCHHHHHHHCCHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
ASKNSVENHFDTSFELETQLERRVKRQLLAEVQAICPDDVTIISVRQSQAKGLGHAILCA
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHH
KSIIGDSPFAVLLPDVLIDDASSDLTKENLAQMVALYNETEVGQIMVEGVPHELVNQYGI
HHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCC
ADINGKDLQPGESLPLSQLVEKPSIEDAPSNLAVVGRYILPAEIWTYLAKTPAGAGDEIQ
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
LTDAIAMLMENQTVNAYYMQGKSHDCGNKLGYMQAHVEHALRHKEIGTEFAEYLKAIVKT
HHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LK
CC
>Mature Secondary Structure
MKQHKIRKAVIPVAGLGTRMLPATKAIPKEMLPVMDKPLIQYVVSEAIAAGIKEIVLVTH
CCCHHHHHHHCCHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC
ASKNSVENHFDTSFELETQLERRVKRQLLAEVQAICPDDVTIISVRQSQAKGLGHAILCA
CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHH
KSIIGDSPFAVLLPDVLIDDASSDLTKENLAQMVALYNETEVGQIMVEGVPHELVNQYGI
HHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHCCC
ADINGKDLQPGESLPLSQLVEKPSIEDAPSNLAVVGRYILPAEIWTYLAKTPAGAGDEIQ
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
LTDAIAMLMENQTVNAYYMQGKSHDCGNKLGYMQAHVEHALRHKEIGTEFAEYLKAIVKT
HHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]