| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is cheB1 [H]
Identifier: 167623400
GI number: 167623400
Start: 1767620
End: 1768810
Strand: Direct
Name: cheB1 [H]
Synonym: Shal_1469
Alternate gene names: 167623400
Gene position: 1767620-1768810 (Clockwise)
Preceding gene: 167623399
Following gene: 167623401
Centisome position: 33.82
GC content: 47.94
Gene sequence:
>1191_bases ATGGGCATTAAAGTTTTAGTCGTTGATGATTCGAGTTTTTTCAGACGACGCGTTAGTGAAATAGTTAATAAAGACTCCGA GCTAGAGGTTGTGGGTACCGCATGTAATGGTGCTGAGGCTGTAAAAATGGCCGCAGAGCTTAATCCAAATGTGATCACCA TGGACATTGAAATGCCGGTCATGGATGGGATCACTGCGGTAAAGCAGATCATGGCGAGCAAGCCAATTCCTATTCTAATG TTCTCATCACTTACACATGATGGTGCCAAAGCAACGTTAGAAGCGTTAGATGCTGGTGCCTTAGACTTCTTGCCAAAGCG TTTTGAAGATATCGCTAGCAATAAAGATGATGCGATAGCGCTATTGCAGCAACGAATTAGAGCATTAGGCCGTAGACGCT TATTTAGACCGATTGCTAGGCCTCTGACTGGCAATGAAAGAGCGCAACCTGCAAATACTAGTAGTGCTACTAGTGAGAGG GCCGCCGATAGAGCGCGCACCTCATCTAGCTTTTCTCGGCCGTCAGTTACCGCATCTGCGGCGAACGCTGCGGCTGCGAG TACAACTGAAAGGTCTGCTAGTCGAGCCAGTGTTATTACTCGTGGCAGTGGAAAAAAGTATAAAGCATTACTTATCGGCA CATCTACAGGAGGCCCGGTTGCGCTACAAAAGGTATTAACCCAACTGCCTGCGAATTATCCGCATCCTATTTTGCTTATC CAGCATATGCCAGCCGCTTTTACACCAACCTTTGCAACAAGGCTTAATAGCTTGTGTAAGATTGAAGTTAAAGAGGCGGA AACCGGCGATCAGTTAAAGCCAGGCTGCGCATACCTAGCGCCAGGCGGCATGCAAATGATGTTAGAGCGAGGCGGAGCTT ACGGCAGAATCAAGGTGATTGCGGGTAAGGCCGATATGAATTACAAACCTTGTGTCGATATCACCTTCGCCTCAGCTTCT AAAGTGATTGGTGGAGACGTATTGGCTGTGGTATTGACGGGCATGGGAGCCGATGGTCGAGAAGGAGCGAGAATGCTTAA AGGCATCGGCGCTACTGTGTGGGCGCAGGATGAGGCAAGCTGTGTGGTTTATGGTATGCCACAAGCGGTAACGGCAGCTG GTATTGCGACTAAATCGATAGCCTTAGAGCATATGGCTGAATCTATTATAAAAGAGACCTGCAATGGCTAA
Upstream 100 bases:
>100_bases TAATAGGAGCTAGCTCTGGTTAGCTTAGGGAATAACGCTTTGTTATTCCCTTTTTTACATACAGCATTGAGCAGGCCTGT GGTGCAGTAAAGGAATTTGA
Downstream 100 bases:
>100_bases GATGGCTTTTGGCCAAAATGTCATTTTGCAACGCGGTGAAATGAATACGCTGTCGTTGCTATTACTGTTTTTGCTGAGTA TTGCATCTTTTACGTTCGGT
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MGIKVLVVDDSSFFRRRVSEIVNKDSELEVVGTACNGAEAVKMAAELNPNVITMDIEMPVMDGITAVKQIMASKPIPILM FSSLTHDGAKATLEALDAGALDFLPKRFEDIASNKDDAIALLQQRIRALGRRRLFRPIARPLTGNERAQPANTSSATSER AADRARTSSSFSRPSVTASAANAAAASTTERSASRASVITRGSGKKYKALLIGTSTGGPVALQKVLTQLPANYPHPILLI QHMPAAFTPTFATRLNSLCKIEVKEAETGDQLKPGCAYLAPGGMQMMLERGGAYGRIKVIAGKADMNYKPCVDITFASAS KVIGGDVLAVVLTGMGADGREGARMLKGIGATVWAQDEASCVVYGMPQAVTAAGIATKSIALEHMAESIIKETCNG
Sequences:
>Translated_396_residues MGIKVLVVDDSSFFRRRVSEIVNKDSELEVVGTACNGAEAVKMAAELNPNVITMDIEMPVMDGITAVKQIMASKPIPILM FSSLTHDGAKATLEALDAGALDFLPKRFEDIASNKDDAIALLQQRIRALGRRRLFRPIARPLTGNERAQPANTSSATSER AADRARTSSSFSRPSVTASAANAAAASTTERSASRASVITRGSGKKYKALLIGTSTGGPVALQKVLTQLPANYPHPILLI QHMPAAFTPTFATRLNSLCKIEVKEAETGDQLKPGCAYLAPGGMQMMLERGGAYGRIKVIAGKADMNYKPCVDITFASAS KVIGGDVLAVVLTGMGADGREGARMLKGIGATVWAQDEASCVVYGMPQAVTAAGIATKSIALEHMAESIIKETCNG >Mature_395_residues GIKVLVVDDSSFFRRRVSEIVNKDSELEVVGTACNGAEAVKMAAELNPNVITMDIEMPVMDGITAVKQIMASKPIPILMF SSLTHDGAKATLEALDAGALDFLPKRFEDIASNKDDAIALLQQRIRALGRRRLFRPIARPLTGNERAQPANTSSATSERA ADRARTSSSFSRPSVTASAANAAAASTTERSASRASVITRGSGKKYKALLIGTSTGGPVALQKVLTQLPANYPHPILLIQ HMPAAFTPTFATRLNSLCKIEVKEAETGDQLKPGCAYLAPGGMQMMLERGGAYGRIKVIAGKADMNYKPCVDITFASASK VIGGDVLAVVLTGMGADGREGARMLKGIGATVWAQDEASCVVYGMPQAVTAAGIATKSIALEHMAESIIKETCNG
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=394, Percent_Identity=35.5329949238579, Blast_Score=230, Evalue=1e-61, Organism=Escherichia coli, GI1790299, Length=127, Percent_Identity=36.2204724409449, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 41785; Mature: 41654
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKVLVVDDSSFFRRRVSEIVNKDSELEVVGTACNGAEAVKMAAELNPNVITMDIEMPV CCEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCH MDGITAVKQIMASKPIPILMFSSLTHDGAKATLEALDAGALDFLPKRFEDIASNKDDAIA HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH LLQQRIRALGRRRLFRPIARPLTGNERAQPANTSSATSERAADRARTSSSFSRPSVTASA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH ANAAAASTTERSASRASVITRGSGKKYKALLIGTSTGGPVALQKVLTQLPANYPHPILLI HHHHHHCCHHHHHHHHHEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE QHMPAAFTPTFATRLNSLCKIEVKEAETGDQLKPGCAYLAPGGMQMMLERGGAYGRIKVI ECCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEEE AGKADMNYKPCVDITFASASKVIGGDVLAVVLTGMGADGREGARMLKGIGATVWAQDEAS EECCCCCCCCCEEEEECCCCHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCC CVVYGMPQAVTAAGIATKSIALEHMAESIIKETCNG EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GIKVLVVDDSSFFRRRVSEIVNKDSELEVVGTACNGAEAVKMAAELNPNVITMDIEMPV CEEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCH MDGITAVKQIMASKPIPILMFSSLTHDGAKATLEALDAGALDFLPKRFEDIASNKDDAIA HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHH LLQQRIRALGRRRLFRPIARPLTGNERAQPANTSSATSERAADRARTSSSFSRPSVTASA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHH ANAAAASTTERSASRASVITRGSGKKYKALLIGTSTGGPVALQKVLTQLPANYPHPILLI HHHHHHCCHHHHHHHHHEEECCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEE QHMPAAFTPTFATRLNSLCKIEVKEAETGDQLKPGCAYLAPGGMQMMLERGGAYGRIKVI ECCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEEE AGKADMNYKPCVDITFASASKVIGGDVLAVVLTGMGADGREGARMLKGIGATVWAQDEAS EECCCCCCCCCEEEEECCCCHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCC CVVYGMPQAVTAAGIATKSIALEHMAESIIKETCNG EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]