| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is cheA [H]
Identifier: 167623399
GI number: 167623399
Start: 1765229
End: 1767532
Strand: Direct
Name: cheA [H]
Synonym: Shal_1468
Alternate gene names: 167623399
Gene position: 1765229-1767532 (Clockwise)
Preceding gene: 167623398
Following gene: 167623400
Centisome position: 33.77
GC content: 46.48
Gene sequence:
>2304_bases ATGTCCTTTGATGTTGATGAAGAGATACTGCAGGACTTTTTGATAGAAGCGGGTGAAATTTTAGAACTTCTACAAGAACA ACTGGTCACGTTAGAAAATAACCCAGATGATACTGAACTGCTCAATGCAATTTTCAGGGGATTTCATACGGTTAAAGGCG GTGCAGGATTCTTAGGTTTGTCACCCATGGTAGATGTCTGCCATGAAGCAGAGAATACCTTCGACCTACTGCGTACAGGC AAACGTGAAGTTTCTGCTAATTTGATGGATGTCATTTTACAAGCAGTAGACTCAATCAACTCAATGTTTGCTGAAACGCA AGCTGGGCAACCTCAATCCCCTGCCGAGTCTACGCTATTGGCGCAGCTTAAAACATTAAGCGCAGGTGAACTGCTTCCTT CTGAAATGGAGGAAGCTGTTGTTAAGGCGCCTGCTGTAGAGTCTACAGTCATCGTTCAAGAGCCTATTATTGAACAGGCG GCGCCGCAAGTACCTCAAGTGGTTGAACAAACATCACCCACAGTGGGCACGGGTAGCATTGATGATATCGATGATATCGA ATTTGAAGCCTTGCTCGATGCTTTGCATGGTACGGGTAACGGCCCTGGCAATGCAGCGGATGAGGCTCCTACACTTTCAC CATCTACACCGTCATTATCTGCACAGTCATTGTCAGCACAGTCGCTATCTGCATCTGATGACATTACCGATGACGAATTT GAATCATTACTCGATGAGCTACATGGCTCCGGTCAGTTTAAAACTCAGTCGGCTGCTCCTGCGGTAATAGAGCAAAGTGG CTCGGATGTTGATTCTGATGAAATTACCGATGATGAATTTGAACGATTACTCGATCAATTGCATGGTTCAGGCACAGGCC CTGGTAACTCATCTAGCGTGACGGAGAGTAGTAACTCCGCTCCTGAACCGCATGAAACCAATAAATCAGAGCCTGTGGTA CAAGCGATAACCACATCGCAGCAGGTGTCTGCAGTTAAGGCCGAAGCTAAACCTGAGCCTAAACCTGAGCATAAACCACA GCCAAAGCCAGAACTAAAACCAGAACCAGAACTAAAGCCAGCAGCCGCAAAAGCTGCCCCAAAAGCGACCGGCAATATGC CCCAAGGTGAAACCACGGTGCGGGTCGATACCTCAAGGCTTGATCAGATCATGAATATGGTCGGAGAGCTGGTATTAGTA CGTAATCGTTTACTCAGTCTTGGCGTAGAGCGTGAAGATGAAGAGATGTCAAAGGCGTTAGCTAACCTTGACTTAGTGAC TGCCGACTTACAAGGCGCAGTGATGAAGACTCGCATGCAGCCCATTAAGAAAGTCTTTGGCCGTTTTCCTCGAGTGGTTC GTGATTTAGCTCGTAGTTTAAATAAAGATATTGATCTTGTTATGATCGGTGAAGATACCGATCTTGATAAAAATCTGGTT GAAGCGTTAGCCGATCCATTAGTTCACTTAGTGAGAAACTCGGTCGATCATGGTATCGAAATGCCAGATGTTCGTGAGGC TCACGGTAAAGCCCGTACAGGTACCATTACATTATCTGCAAGCCAAGAAGGCGATCACATCCTGCTTAAAATTGAGGATG ATGGTGCTGGTATGGATCCAGAAAAACTTAAAGGGATTGCAATCAGTCGCGGCGTGCTCGATGAAGATGCCGCCGCCCGC ATGAGCGATGAAGAAGCCTATAACCTTATCTTTGCTCCTGGGTTCTCAACCAAGGTTGAAGTTTCAGATATTTCGGGTCG TGGTGTGGGTATGGACGTGGTTAAGACCCGTATTACCCAGCTGAACGGTTCTGTTTATATCGACTCACAACTAGGAAAGG GCACACGCCTTGAGATTAAGGTGCCGTTAACACTGGCAATTATGCCGACCTTAATGGTGGAAGTTACCGAGCAAGTGTTT GCTCTACCGCTGTCGAGCGTGAATGAGATATTTCACTTAGACTTGACTAAGACTAATGTGGTTGATGGTCAATTGACCGT CATTGTCCGAGATAAAGCGGTGCCACTCTTTTATTTAGAGCAGTGGTTGTCTCGCAATAAATTGAATTTTAGGCATGGTG ACAAACAGCATGGACATGTCGTCATCGTCCAGCTAGGTACGATGCAAATAGGTTTTGTGGTGGACTCACTCATCGGTCAA GAAGAGGTGGTGATTAAACCGTTAGGGACATTGCTTCATGGCACTCCTGGCATGGCGGGGGCAACCATTACTTCTGATGG TGGCATCGCACTGATTTTAGATGTGCCGGGTTTACTTAAGCATTACGCACGTAATAGGAGCTAG
Upstream 100 bases:
>100_bases AGGTCCTATTGTGAATGCAGAACGCCGTCAAGACGTGGTGACTGGTCAAGATGAAGTTGACGATCTGCTTTCGAGTTTAG GTTTTTAAGGGAGTCAAAGA
Downstream 100 bases:
>100_bases CTCTGGTTAGCTTAGGGAATAACGCTTTGTTATTCCCTTTTTTACATACAGCATTGAGCAGGCCTGTGGTGCAGTAAAGG AATTTGAATGGGCATTAAAG
Product: signal transduction histidine kinase CheA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 767; Mature: 766
Protein sequence:
>767_residues MSFDVDEEILQDFLIEAGEILELLQEQLVTLENNPDDTELLNAIFRGFHTVKGGAGFLGLSPMVDVCHEAENTFDLLRTG KREVSANLMDVILQAVDSINSMFAETQAGQPQSPAESTLLAQLKTLSAGELLPSEMEEAVVKAPAVESTVIVQEPIIEQA APQVPQVVEQTSPTVGTGSIDDIDDIEFEALLDALHGTGNGPGNAADEAPTLSPSTPSLSAQSLSAQSLSASDDITDDEF ESLLDELHGSGQFKTQSAAPAVIEQSGSDVDSDEITDDEFERLLDQLHGSGTGPGNSSSVTESSNSAPEPHETNKSEPVV QAITTSQQVSAVKAEAKPEPKPEHKPQPKPELKPEPELKPAAAKAAPKATGNMPQGETTVRVDTSRLDQIMNMVGELVLV RNRLLSLGVEREDEEMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKDIDLVMIGEDTDLDKNLV EALADPLVHLVRNSVDHGIEMPDVREAHGKARTGTITLSASQEGDHILLKIEDDGAGMDPEKLKGIAISRGVLDEDAAAR MSDEEAYNLIFAPGFSTKVEVSDISGRGVGMDVVKTRITQLNGSVYIDSQLGKGTRLEIKVPLTLAIMPTLMVEVTEQVF ALPLSSVNEIFHLDLTKTNVVDGQLTVIVRDKAVPLFYLEQWLSRNKLNFRHGDKQHGHVVIVQLGTMQIGFVVDSLIGQ EEVVIKPLGTLLHGTPGMAGATITSDGGIALILDVPGLLKHYARNRS
Sequences:
>Translated_767_residues MSFDVDEEILQDFLIEAGEILELLQEQLVTLENNPDDTELLNAIFRGFHTVKGGAGFLGLSPMVDVCHEAENTFDLLRTG KREVSANLMDVILQAVDSINSMFAETQAGQPQSPAESTLLAQLKTLSAGELLPSEMEEAVVKAPAVESTVIVQEPIIEQA APQVPQVVEQTSPTVGTGSIDDIDDIEFEALLDALHGTGNGPGNAADEAPTLSPSTPSLSAQSLSAQSLSASDDITDDEF ESLLDELHGSGQFKTQSAAPAVIEQSGSDVDSDEITDDEFERLLDQLHGSGTGPGNSSSVTESSNSAPEPHETNKSEPVV QAITTSQQVSAVKAEAKPEPKPEHKPQPKPELKPEPELKPAAAKAAPKATGNMPQGETTVRVDTSRLDQIMNMVGELVLV RNRLLSLGVEREDEEMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKDIDLVMIGEDTDLDKNLV EALADPLVHLVRNSVDHGIEMPDVREAHGKARTGTITLSASQEGDHILLKIEDDGAGMDPEKLKGIAISRGVLDEDAAAR MSDEEAYNLIFAPGFSTKVEVSDISGRGVGMDVVKTRITQLNGSVYIDSQLGKGTRLEIKVPLTLAIMPTLMVEVTEQVF ALPLSSVNEIFHLDLTKTNVVDGQLTVIVRDKAVPLFYLEQWLSRNKLNFRHGDKQHGHVVIVQLGTMQIGFVVDSLIGQ EEVVIKPLGTLLHGTPGMAGATITSDGGIALILDVPGLLKHYARNRS >Mature_766_residues SFDVDEEILQDFLIEAGEILELLQEQLVTLENNPDDTELLNAIFRGFHTVKGGAGFLGLSPMVDVCHEAENTFDLLRTGK REVSANLMDVILQAVDSINSMFAETQAGQPQSPAESTLLAQLKTLSAGELLPSEMEEAVVKAPAVESTVIVQEPIIEQAA PQVPQVVEQTSPTVGTGSIDDIDDIEFEALLDALHGTGNGPGNAADEAPTLSPSTPSLSAQSLSAQSLSASDDITDDEFE SLLDELHGSGQFKTQSAAPAVIEQSGSDVDSDEITDDEFERLLDQLHGSGTGPGNSSSVTESSNSAPEPHETNKSEPVVQ AITTSQQVSAVKAEAKPEPKPEHKPQPKPELKPEPELKPAAAKAAPKATGNMPQGETTVRVDTSRLDQIMNMVGELVLVR NRLLSLGVEREDEEMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKDIDLVMIGEDTDLDKNLVE ALADPLVHLVRNSVDHGIEMPDVREAHGKARTGTITLSASQEGDHILLKIEDDGAGMDPEKLKGIAISRGVLDEDAAARM SDEEAYNLIFAPGFSTKVEVSDISGRGVGMDVVKTRITQLNGSVYIDSQLGKGTRLEIKVPLTLAIMPTLMVEVTEQVFA LPLSSVNEIFHLDLTKTNVVDGQLTVIVRDKAVPLFYLEQWLSRNKLNFRHGDKQHGHVVIVQLGTMQIGFVVDSLIGQE EVVIKPLGTLLHGTPGMAGATITSDGGIALILDVPGLLKHYARNRS
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=422, Percent_Identity=41.2322274881517, Blast_Score=291, Evalue=8e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR010808 [H]
Pfam domain/function: PF01584 CheW; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt; PF07194 P2 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 82448; Mature: 82317
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDVDEEILQDFLIEAGEILELLQEQLVTLENNPDDTELLNAIFRGFHTVKGGAGFLGL CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC SPMVDVCHEAENTFDLLRTGKREVSANLMDVILQAVDSINSMFAETQAGQPQSPAESTLL CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AQLKTLSAGELLPSEMEEAVVKAPAVESTVIVQEPIIEQAAPQVPQVVEQTSPTVGTGSI HHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCHHHHHHHHCCCCCCCCCC DDIDDIEFEALLDALHGTGNGPGNAADEAPTLSPSTPSLSAQSLSAQSLSASDDITDDEF CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHCCCCCCCCHHHH ESLLDELHGSGQFKTQSAAPAVIEQSGSDVDSDEITDDEFERLLDQLHGSGTGPGNSSSV HHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC TESSNSAPEPHETNKSEPVVQAITTSQQVSAVKAEAKPEPKPEHKPQPKPELKPEPELKP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC AAAKAAPKATGNMPQGETTVRVDTSRLDQIMNMVGELVLVRNRLLSLGVEREDEEMSKAL HHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKDIDLVMIGEDTDLDKNLV HHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHH EALADPLVHLVRNSVDHGIEMPDVREAHGKARTGTITLSASQEGDHILLKIEDDGAGMDP HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCH EKLKGIAISRGVLDEDAAARMSDEEAYNLIFAPGFSTKVEVSDISGRGVGMDVVKTRITQ HHHCCCCEECCCCCCHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHH LNGSVYIDSQLGKGTRLEIKVPLTLAIMPTLMVEVTEQVFALPLSSVNEIFHLDLTKTNV CCCCEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEECCCCEE VDGQLTVIVRDKAVPLFYLEQWLSRNKLNFRHGDKQHGHVVIVQLGTMQIGFVVDSLIGQ ECCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCC EEVVIKPLGTLLHGTPGMAGATITSDGGIALILDVPGLLKHYARNRS CCEEHHHHHHHHCCCCCCCCCEEECCCCEEEEECCCHHHHHHHCCCC >Mature Secondary Structure SFDVDEEILQDFLIEAGEILELLQEQLVTLENNPDDTELLNAIFRGFHTVKGGAGFLGL CCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCC SPMVDVCHEAENTFDLLRTGKREVSANLMDVILQAVDSINSMFAETQAGQPQSPAESTLL CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH AQLKTLSAGELLPSEMEEAVVKAPAVESTVIVQEPIIEQAAPQVPQVVEQTSPTVGTGSI HHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCHHHHHHHHCCCCCCCCCC DDIDDIEFEALLDALHGTGNGPGNAADEAPTLSPSTPSLSAQSLSAQSLSASDDITDDEF CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCHHHCCCCCCCCHHHH ESLLDELHGSGQFKTQSAAPAVIEQSGSDVDSDEITDDEFERLLDQLHGSGTGPGNSSSV HHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC TESSNSAPEPHETNKSEPVVQAITTSQQVSAVKAEAKPEPKPEHKPQPKPELKPEPELKP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC AAAKAAPKATGNMPQGETTVRVDTSRLDQIMNMVGELVLVRNRLLSLGVEREDEEMSKAL HHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKDIDLVMIGEDTDLDKNLV HHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHH EALADPLVHLVRNSVDHGIEMPDVREAHGKARTGTITLSASQEGDHILLKIEDDGAGMDP HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCH EKLKGIAISRGVLDEDAAARMSDEEAYNLIFAPGFSTKVEVSDISGRGVGMDVVKTRITQ HHHCCCCEECCCCCCHHHHHCCCCCCEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHH LNGSVYIDSQLGKGTRLEIKVPLTLAIMPTLMVEVTEQVFALPLSSVNEIFHLDLTKTNV CCCCEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCHHHHHHEEEEECCCCEE VDGQLTVIVRDKAVPLFYLEQWLSRNKLNFRHGDKQHGHVVIVQLGTMQIGFVVDSLIGQ ECCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCC EEVVIKPLGTLLHGTPGMAGATITSDGGIALILDVPGLLKHYARNRS CCEEHHHHHHHHCCCCCCCCCEEECCCCEEEEECCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550470; 10360571; 9989504 [H]