| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is cheZ [H]
Identifier: 167623398
GI number: 167623398
Start: 1764479
End: 1765216
Strand: Direct
Name: cheZ [H]
Synonym: Shal_1467
Alternate gene names: 167623398
Gene position: 1764479-1765216 (Clockwise)
Preceding gene: 167623397
Following gene: 167623399
Centisome position: 33.76
GC content: 42.55
Gene sequence:
>738_bases ATGCAGCAACAATTGTCAGAGCTGATAACTCTTGAGCAAGCACAGAGGCTAGTTGCACTTCTCACCGAAGGTGAGCAAGA AAAAGCAGATGAGTTGATTAGGGAGATCTCAGCGCCAATTCAAAAAGATCTTTTTGATGAAGTTGGGCGGTTAACTCGTC AACTTCACAGTGCTATTTCTGATTTTCAATTCGATAATCGTTTAATCGAATTAGCCAATACAGAAATCCCTGATGCAAAA GAACGTTTAACTTATGTCATAGACATGACTGAGCAAGCGGCAAATAAAACCATGGACGCGGTGGAGGAGTGTTTACCTCT TGCTAGTGCATTGAGCGACAATATTCAGGCTGTTAAGCCAGCTTGGGATAAGCTTATGCGTAGAGAGCTGCCGCTGACTG AATTTAAAACACTATGCCATGACATCCAACAGTTTGTAGAAAGAAGCGAGTCGGATGCAAGCCGAGTAAAAGAGCTGCTT AATCAAATTCTATTGGCACAAGACTTTCAGGACTTGACTGGACAGATGATCCGTCGAGTGATTGAACTCGTCAGGGAAGT TGAGAATAGTTTAGTGTCGATGTTGACAGTATTTGGTGAGCAACCTACAACTGCGGTTGATGATAAACCAAATCTAAATG TTGAAGCTGAAGGTCCTATTGTGAATGCAGAACGCCGTCAAGACGTGGTGACTGGTCAAGATGAAGTTGACGATCTGCTT TCGAGTTTAGGTTTTTAA
Upstream 100 bases:
>100_bases GCTGGCGTTAACGGATATGTGGTTAAGCCATTTACTGCGGCCACACTTAAAGAAAAGTTAGATAAAATTTTCGAAAGACT CGGCTAAGCAGGGATGAGCT
Downstream 100 bases:
>100_bases GGGAGTCAAAGAATGTCCTTTGATGTTGATGAAGAGATACTGCAGGACTTTTTGATAGAAGCGGGTGAAATTTTAGAACT TCTACAAGAACAACTGGTCA
Product: chemotaxis phosphatase CheZ
Products: NA
Alternate protein names: Chemotaxis protein CheZ [H]
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MQQQLSELITLEQAQRLVALLTEGEQEKADELIREISAPIQKDLFDEVGRLTRQLHSAISDFQFDNRLIELANTEIPDAK ERLTYVIDMTEQAANKTMDAVEECLPLASALSDNIQAVKPAWDKLMRRELPLTEFKTLCHDIQQFVERSESDASRVKELL NQILLAQDFQDLTGQMIRRVIELVREVENSLVSMLTVFGEQPTTAVDDKPNLNVEAEGPIVNAERRQDVVTGQDEVDDLL SSLGF
Sequences:
>Translated_245_residues MQQQLSELITLEQAQRLVALLTEGEQEKADELIREISAPIQKDLFDEVGRLTRQLHSAISDFQFDNRLIELANTEIPDAK ERLTYVIDMTEQAANKTMDAVEECLPLASALSDNIQAVKPAWDKLMRRELPLTEFKTLCHDIQQFVERSESDASRVKELL NQILLAQDFQDLTGQMIRRVIELVREVENSLVSMLTVFGEQPTTAVDDKPNLNVEAEGPIVNAERRQDVVTGQDEVDDLL SSLGF >Mature_245_residues MQQQLSELITLEQAQRLVALLTEGEQEKADELIREISAPIQKDLFDEVGRLTRQLHSAISDFQFDNRLIELANTEIPDAK ERLTYVIDMTEQAANKTMDAVEECLPLASALSDNIQAVKPAWDKLMRRELPLTEFKTLCHDIQQFVERSESDASRVKELL NQILLAQDFQDLTGQMIRRVIELVREVENSLVSMLTVFGEQPTTAVDDKPNLNVEAEGPIVNAERRQDVVTGQDEVDDLL SSLGF
Specific function: Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) [H]
COG id: COG3143
COG function: function code NT; Chemotaxis protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CheZ family [H]
Homologues:
Organism=Escherichia coli, GI1788190, Length=205, Percent_Identity=34.1463414634146, Blast_Score=107, Evalue=7e-25,
Paralogues:
None
Copy number: 292 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007439 [H]
Pfam domain/function: PF04344 CheZ [H]
EC number: NA
Molecular weight: Translated: 27751; Mature: 27751
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQQLSELITLEQAQRLVALLTEGEQEKADELIREISAPIQKDLFDEVGRLTRQLHSAIS CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFQFDNRLIELANTEIPDAKERLTYVIDMTEQAANKTMDAVEECLPLASALSDNIQAVKP HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWDKLMRRELPLTEFKTLCHDIQQFVERSESDASRVKELLNQILLAQDFQDLTGQMIRRV HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IELVREVENSLVSMLTVFGEQPTTAVDDKPNLNVEAEGPIVNAERRQDVVTGQDEVDDLL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHCCCHHHHHHHH SSLGF HHHCC >Mature Secondary Structure MQQQLSELITLEQAQRLVALLTEGEQEKADELIREISAPIQKDLFDEVGRLTRQLHSAIS CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFQFDNRLIELANTEIPDAKERLTYVIDMTEQAANKTMDAVEECLPLASALSDNIQAVKP HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWDKLMRRELPLTEFKTLCHDIQQFVERSESDASRVKELLNQILLAQDFQDLTGQMIRRV HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IELVREVENSLVSMLTVFGEQPTTAVDDKPNLNVEAEGPIVNAERRQDVVTGQDEVDDLL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHCCCHHHHHHHH SSLGF HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7860605; 10052136; 10984043 [H]