Click here to switch to the map view.

The map label for this gene is fliD [H]

Identifier: 167623372

GI number: 167623372

Start: 1738103

End: 1739467

Strand: Direct

Name: fliD [H]

Synonym: Shal_1441

Alternate gene names: 167623372

Gene position: 1738103-1739467 (Clockwise)

Preceding gene: 167623371

Following gene: 167623373

Centisome position: 33.25

GC content: 43.59

Gene sequence:

>1365_bases
ATGGCATTAACAGCAACCGGTATAGGCTCCGGCTTAGATATCAATACCATTGTTAAGGTGTTGGTTGATGCCGAAAAAAT
ACCCAAAGAAGCGATTTTCGACAAAACTGAGCAAACCATTGAATCTAAAGTATCTGCCATTGGTACACTTAAGAGCCAGT
TGTCGACCTTCCAAGATGCCCTTGAAAAGCTCAGTGATCCCGCAGCGCTAAATATTCGTAAAGTTTCTACTGGTGATAGT
AGCTATTTTACCGCTGCTGCGGATAAAAACGCGCAATCGGGCAGTTATCAAATACAGGTCGAGCAGTTAGCTGCATTTCA
TAAAGTTGCAGGCGTAAATGTGGCCGATGCAACTGCTGCAGTGGGACAAGGTAAGTTGGAGCTCTCTGTTAACGGCAAGG
CATTTTCAGTTGACGTCGAAGCAGGCGATTCCTTAGAGACCATCGCTAAAAAAGTAAATGACTCCGCCGATAACTCAGGT
GTGACTGCAACCATTATTAAGAGTGATGACGGTAGTCGCCTAGTCTTTAGCTCTGATGAGTCTGGTACAGATAGCCAAGT
CAGCGTCGTCGCAACGGACACTGTCGGTTCAGGCATCAATGATATGTTTGGTACTGGCAATTTGACCGAGTTGCAAGCGG
CCCAAAATGCAGTGATTTACATCGATGGTCAAAAAGTGACCTCGCAAAGTAATGATGTTGAAAATGCAATTGCAGGAGTG
ACCTTATCGCTTACCGATGCAGATGTGAATAAAACGTCAACCTTAAAAATTGAACAAGACAACGCAGCAGTAAAAGAGAA
CGTGAAGGGTTTTGTTGACGCTTATAATACTCTTGTCGAGTCAATTAGTAATTTGTCTAAATACGACACTGAGAAAGAAG
AGGCTGCTGCATTACAAGGCGATTCAATGATCCGGTCTATTGAATCACAGATGCGTAATATGATCAGTAACCGCGTCGAT
GTCGATGGTGAAACTATCGCCCTTTATGACATAGGTATCGAGACTGACAGATACGGAAAAATGTCGATTAATGATGAAAA
GCTCGATAAAGTACTGGCCGAGGATATGGGGGCCGTTGAGGGATTATTCAGTACTCCAGACTCCGGTATCGCAACCAGTT
TAGATAACCTAGTTGAGGGTTACGTTAAGGCTGGTGGATTAATCGATAGCCGCGATAATGCATTAACGAATGACAAACAA
CGATTGGATGATCAGCGTGAGGCGTTCAGTTTAAAAATGGAGATGTTGCAAGCTCGATTATTTAAACAGTTTAACGCCAT
GGATTTGATTGTAGGACAGTTAAACCAGCAGAGTGCAGGGTTAGTCGATAGATTGAATTCTCTACCTGGCGTTGTTAGCC
AGTAG

Upstream 100 bases:

>100_bases
GGAACTCGCACAAAAGCTTGCAGAAGTGGCGGGGTTCTTGCTTAAGACTGAAGCATAACTGACGCGTCAAAATTCAAACT
ATTTTGTCTAGGGGATAAAA

Downstream 100 bases:

>100_bases
TTATTAACTTTAACTAACTTAGGAGTTTAGTTTGCAGTCATTGTTTGAGTTAAATGAAGAGCTGAAAAAAGTGCTTACCA
CACTTAACCTAGTTCCGGCT

Product: flagellar hook-associated 2 domain-containing protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MALTATGIGSGLDINTIVKVLVDAEKIPKEAIFDKTEQTIESKVSAIGTLKSQLSTFQDALEKLSDPAALNIRKVSTGDS
SYFTAAADKNAQSGSYQIQVEQLAAFHKVAGVNVADATAAVGQGKLELSVNGKAFSVDVEAGDSLETIAKKVNDSADNSG
VTATIIKSDDGSRLVFSSDESGTDSQVSVVATDTVGSGINDMFGTGNLTELQAAQNAVIYIDGQKVTSQSNDVENAIAGV
TLSLTDADVNKTSTLKIEQDNAAVKENVKGFVDAYNTLVESISNLSKYDTEKEEAAALQGDSMIRSIESQMRNMISNRVD
VDGETIALYDIGIETDRYGKMSINDEKLDKVLAEDMGAVEGLFSTPDSGIATSLDNLVEGYVKAGGLIDSRDNALTNDKQ
RLDDQREAFSLKMEMLQARLFKQFNAMDLIVGQLNQQSAGLVDRLNSLPGVVSQ

Sequences:

>Translated_454_residues
MALTATGIGSGLDINTIVKVLVDAEKIPKEAIFDKTEQTIESKVSAIGTLKSQLSTFQDALEKLSDPAALNIRKVSTGDS
SYFTAAADKNAQSGSYQIQVEQLAAFHKVAGVNVADATAAVGQGKLELSVNGKAFSVDVEAGDSLETIAKKVNDSADNSG
VTATIIKSDDGSRLVFSSDESGTDSQVSVVATDTVGSGINDMFGTGNLTELQAAQNAVIYIDGQKVTSQSNDVENAIAGV
TLSLTDADVNKTSTLKIEQDNAAVKENVKGFVDAYNTLVESISNLSKYDTEKEEAAALQGDSMIRSIESQMRNMISNRVD
VDGETIALYDIGIETDRYGKMSINDEKLDKVLAEDMGAVEGLFSTPDSGIATSLDNLVEGYVKAGGLIDSRDNALTNDKQ
RLDDQREAFSLKMEMLQARLFKQFNAMDLIVGQLNQQSAGLVDRLNSLPGVVSQ
>Mature_453_residues
ALTATGIGSGLDINTIVKVLVDAEKIPKEAIFDKTEQTIESKVSAIGTLKSQLSTFQDALEKLSDPAALNIRKVSTGDSS
YFTAAADKNAQSGSYQIQVEQLAAFHKVAGVNVADATAAVGQGKLELSVNGKAFSVDVEAGDSLETIAKKVNDSADNSGV
TATIIKSDDGSRLVFSSDESGTDSQVSVVATDTVGSGINDMFGTGNLTELQAAQNAVIYIDGQKVTSQSNDVENAIAGVT
LSLTDADVNKTSTLKIEQDNAAVKENVKGFVDAYNTLVESISNLSKYDTEKEEAAALQGDSMIRSIESQMRNMISNRVDV
DGETIALYDIGIETDRYGKMSINDEKLDKVLAEDMGAVEGLFSTPDSGIATSLDNLVEGYVKAGGLIDSRDNALTNDKQR
LDDQREAFSLKMEMLQARLFKQFNAMDLIVGQLNQQSAGLVDRLNSLPGVVSQ

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=465, Percent_Identity=30.1075268817204, Blast_Score=145, Evalue=5e-36,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48204; Mature: 48073

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTATGIGSGLDINTIVKVLVDAEKIPKEAIFDKTEQTIESKVSAIGTLKSQLSTFQDA
CEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKLSDPAALNIRKVSTGDSSYFTAAADKNAQSGSYQIQVEQLAAFHKVAGVNVADATAA
HHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHH
VGQGKLELSVNGKAFSVDVEAGDSLETIAKKVNDSADNSGVTATIIKSDDGSRLVFSSDE
CCCCEEEEEECCEEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCC
SGTDSQVSVVATDTVGSGINDMFGTGNLTELQAAQNAVIYIDGQKVTSQSNDVENAIAGV
CCCCCEEEEEEECCCCCCCHHHCCCCCCHHHHHCCCEEEEEECCEECCCCCCHHHHHCCE
TLSLTDADVNKTSTLKIEQDNAAVKENVKGFVDAYNTLVESISNLSKYDTEKEEAAALQG
EEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
DSMIRSIESQMRNMISNRVDVDGETIALYDIGIETDRYGKMSINDEKLDKVLAEDMGAVE
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GLFSTPDSGIATSLDNLVEGYVKAGGLIDSRDNALTNDKQRLDDQREAFSLKMEMLQARL
HHHCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FKQFNAMDLIVGQLNQQSAGLVDRLNSLPGVVSQ
HHHHCHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALTATGIGSGLDINTIVKVLVDAEKIPKEAIFDKTEQTIESKVSAIGTLKSQLSTFQDA
EEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKLSDPAALNIRKVSTGDSSYFTAAADKNAQSGSYQIQVEQLAAFHKVAGVNVADATAA
HHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHH
VGQGKLELSVNGKAFSVDVEAGDSLETIAKKVNDSADNSGVTATIIKSDDGSRLVFSSDE
CCCCEEEEEECCEEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCC
SGTDSQVSVVATDTVGSGINDMFGTGNLTELQAAQNAVIYIDGQKVTSQSNDVENAIAGV
CCCCCEEEEEEECCCCCCCHHHCCCCCCHHHHHCCCEEEEEECCEECCCCCCHHHHHCCE
TLSLTDADVNKTSTLKIEQDNAAVKENVKGFVDAYNTLVESISNLSKYDTEKEEAAALQG
EEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
DSMIRSIESQMRNMISNRVDVDGETIALYDIGIETDRYGKMSINDEKLDKVLAEDMGAVE
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GLFSTPDSGIATSLDNLVEGYVKAGGLIDSRDNALTNDKQRLDDQREAFSLKMEMLQARL
HHHCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FKQFNAMDLIVGQLNQQSAGLVDRLNSLPGVVSQ
HHHHCHHHHHHHHCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9488388; 10678962 [H]