Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is 167623371

Identifier: 167623371

GI number: 167623371

Start: 1737674

End: 1738060

Strand: Direct

Name: 167623371

Synonym: Shal_1440

Alternate gene names: NA

Gene position: 1737674-1738060 (Clockwise)

Preceding gene: 167623370

Following gene: 167623372

Centisome position: 33.24

GC content: 45.48

Gene sequence:

>387_bases
ATGACAATGGATGTAAGTTACGCAAGTTCAGCAAACCCTGCTGTGGTTAAGTTAGATGTAAATAACCCGGCTTTGGAGAC
CGAGCCATCGGCAAGCTTTGCGCAGCTCAATCCGAGCAATGACGTGCTAAATGAAACTGTGGTAAGTGAGGAGTCTGAAG
CGCAACAAGAAATTCTGCATGATGTCGCTAATGAGCTTACTGATATGATGTCTCTAATGCGTAAAGGTTTGGCATTTAAA
GTTGATGAGAGTTCAGGTCAAAGTGTCGTTAGCGTGATGGATGTCGTCTCTGGCGATGTGATCCGGCAGATCCCAAATGA
AGAAGCATTGGAACTCGCACAAAAGCTTGCAGAAGTGGCGGGGTTCTTGCTTAAGACTGAAGCATAA

Upstream 100 bases:

>100_bases
ATTTAAAGGGGAGATTCGTAATGAGTCTCCCTTTGTTGTTTGTATTACATGACGTTATTAGCAGAGGTTGGCGTCTTTTT
AGTGTGTTGCGGAGGTAGAT

Downstream 100 bases:

>100_bases
CTGACGCGTCAAAATTCAAACTATTTTGTCTAGGGGATAAAAATGGCATTAACAGCAACCGGTATAGGCTCCGGCTTAGA
TATCAATACCATTGTTAAGG

Product: flagellar protein FlaG protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MTMDVSYASSANPAVVKLDVNNPALETEPSASFAQLNPSNDVLNETVVSEESEAQQEILHDVANELTDMMSLMRKGLAFK
VDESSGQSVVSVMDVVSGDVIRQIPNEEALELAQKLAEVAGFLLKTEA

Sequences:

>Translated_128_residues
MTMDVSYASSANPAVVKLDVNNPALETEPSASFAQLNPSNDVLNETVVSEESEAQQEILHDVANELTDMMSLMRKGLAFK
VDESSGQSVVSVMDVVSGDVIRQIPNEEALELAQKLAEVAGFLLKTEA
>Mature_127_residues
TMDVSYASSANPAVVKLDVNNPALETEPSASFAQLNPSNDVLNETVVSEESEAQQEILHDVANELTDMMSLMRKGLAFKV
DESSGQSVVSVMDVVSGDVIRQIPNEEALELAQKLAEVAGFLLKTEA

Specific function: Unknown

COG id: COG1334

COG function: function code N; Uncharacterized flagellar protein FlaG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13741; Mature: 13609

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMDVSYASSANPAVVKLDVNNPALETEPSASFAQLNPSNDVLNETVVSEESEAQQEILH
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHCCHHHHHHHHHH
DVANELTDMMSLMRKGLAFKVDESSGQSVVSVMDVVSGDVIRQIPNEEALELAQKLAEVA
HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GFLLKTEA
HHHHHCCC
>Mature Secondary Structure 
TMDVSYASSANPAVVKLDVNNPALETEPSASFAQLNPSNDVLNETVVSEESEAQQEILH
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHCCHHHHHHHHHH
DVANELTDMMSLMRKGLAFKVDESSGQSVVSVMDVVSGDVIRQIPNEEALELAQKLAEVA
HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GFLLKTEA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA