| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623371
Identifier: 167623371
GI number: 167623371
Start: 1737674
End: 1738060
Strand: Direct
Name: 167623371
Synonym: Shal_1440
Alternate gene names: NA
Gene position: 1737674-1738060 (Clockwise)
Preceding gene: 167623370
Following gene: 167623372
Centisome position: 33.24
GC content: 45.48
Gene sequence:
>387_bases ATGACAATGGATGTAAGTTACGCAAGTTCAGCAAACCCTGCTGTGGTTAAGTTAGATGTAAATAACCCGGCTTTGGAGAC CGAGCCATCGGCAAGCTTTGCGCAGCTCAATCCGAGCAATGACGTGCTAAATGAAACTGTGGTAAGTGAGGAGTCTGAAG CGCAACAAGAAATTCTGCATGATGTCGCTAATGAGCTTACTGATATGATGTCTCTAATGCGTAAAGGTTTGGCATTTAAA GTTGATGAGAGTTCAGGTCAAAGTGTCGTTAGCGTGATGGATGTCGTCTCTGGCGATGTGATCCGGCAGATCCCAAATGA AGAAGCATTGGAACTCGCACAAAAGCTTGCAGAAGTGGCGGGGTTCTTGCTTAAGACTGAAGCATAA
Upstream 100 bases:
>100_bases ATTTAAAGGGGAGATTCGTAATGAGTCTCCCTTTGTTGTTTGTATTACATGACGTTATTAGCAGAGGTTGGCGTCTTTTT AGTGTGTTGCGGAGGTAGAT
Downstream 100 bases:
>100_bases CTGACGCGTCAAAATTCAAACTATTTTGTCTAGGGGATAAAAATGGCATTAACAGCAACCGGTATAGGCTCCGGCTTAGA TATCAATACCATTGTTAAGG
Product: flagellar protein FlaG protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTMDVSYASSANPAVVKLDVNNPALETEPSASFAQLNPSNDVLNETVVSEESEAQQEILHDVANELTDMMSLMRKGLAFK VDESSGQSVVSVMDVVSGDVIRQIPNEEALELAQKLAEVAGFLLKTEA
Sequences:
>Translated_128_residues MTMDVSYASSANPAVVKLDVNNPALETEPSASFAQLNPSNDVLNETVVSEESEAQQEILHDVANELTDMMSLMRKGLAFK VDESSGQSVVSVMDVVSGDVIRQIPNEEALELAQKLAEVAGFLLKTEA >Mature_127_residues TMDVSYASSANPAVVKLDVNNPALETEPSASFAQLNPSNDVLNETVVSEESEAQQEILHDVANELTDMMSLMRKGLAFKV DESSGQSVVSVMDVVSGDVIRQIPNEEALELAQKLAEVAGFLLKTEA
Specific function: Unknown
COG id: COG1334
COG function: function code N; Uncharacterized flagellar protein FlaG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13741; Mature: 13609
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMDVSYASSANPAVVKLDVNNPALETEPSASFAQLNPSNDVLNETVVSEESEAQQEILH CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHCCHHHHHHHHHH DVANELTDMMSLMRKGLAFKVDESSGQSVVSVMDVVSGDVIRQIPNEEALELAQKLAEVA HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GFLLKTEA HHHHHCCC >Mature Secondary Structure TMDVSYASSANPAVVKLDVNNPALETEPSASFAQLNPSNDVLNETVVSEESEAQQEILH CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHCCHHHHHHHHHH DVANELTDMMSLMRKGLAFKVDESSGQSVVSVMDVVSGDVIRQIPNEEALELAQKLAEVA HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH GFLLKTEA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA