| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623346
Identifier: 167623346
GI number: 167623346
Start: 1709701
End: 1710696
Strand: Direct
Name: 167623346
Synonym: Shal_1415
Alternate gene names: NA
Gene position: 1709701-1710696 (Clockwise)
Preceding gene: 167623345
Following gene: 167623347
Centisome position: 32.71
GC content: 32.83
Gene sequence:
>996_bases ATGGTGGAAGTGTACTGTGTTGATGCCGCTCATGGTGATTGTATTTTGGTTGTTTCTAATGGTGTTAGAATTCTGATTGA TTCTGGGCCTAAAGAATTAAAGATACGACGACAAGTAAAAGGTACATTAGGGAAATTACTTCCAGACAAAACCGTCGATT TAGCCATAGTTACTCATAATGATGATGATCATATAGGTGGGTTTAAAACACTAATATCTGAGAATACGATAATTGTTAAA AAAATATTATTCAATAGTGTTGTTAGTTTAAATAAAATTCTCGGAAAAAAAACAACTAAAATTTCATATAGGCAAGATAA AGAATTAAGTGGTTTTGTAAAAACCACAGATATTGAGCTTATTTCAAAACATTATGATCCAAAAGTGGATTCAAATATAA CTGTTGGTGAACTAACCGTTAGAATTATTTCTCCTAATTACAACGCACTGTTAGATTTAGGGAAGTGGAAAGAAAAAGAA GAAGCTAAGTTAAGTAGACATAAAATTTCAGGGAAAGAAAAAAATGAGTTATCGATAATGGAATATTTAAAAACTTTTAA TACTTATAGATTTGAAAGTGACATGTCACCTACTAATCGTTCCAGTTTGGCTGTAATTATTGAAGGGGATGGTTTCAAAG GGTTATTCCTAGGAGATTCTCACTCAAAGGATATTGAGGAGTACTTTTCAACACGTGAACCTGATGAATGTTTATTTGAT GTCGTAAAAATATCACACCATGGAAGTCGTAAAAATACTAGCAATGAACTACTTAAGACGGTTATCAGTAAGGAGTTTAT TATTTGTGCTGATAAGTCCAGTCGACATGCACACCCCGACTCCTTGATGATGGCACGATTAATAGGAATCAAAAAGTCAC CAGTAATTCATTTTAGTACCGATTCAGATAAACTGAGAATGATGTTATCTGAGATCACTGATGAGGCTACTTTTACTTTT CCATCTGAAGGTGTGAATAGGATTGTTTATGTCTAA
Upstream 100 bases:
>100_bases AACTATAAGTTATTGACTGGTTCTTTTAGATTACATAGCTATAAGTTTATGATATAAAGAGATAAATTATTATCGTTTTA GACTTATCTCGGTTCTTATT
Downstream 100 bases:
>100_bases AGTTAATGCTGTTAAAGTCATTAAACATGATCCTGATGGCGATATGTTTGGAAGTGGTTTGTTTTTTAAGGCTTGCTGTA ACTCTCAATCTTTCGTATTG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: Zn-Dependent Hydrolase; Hydrolase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase Protein; Beta-Lactamase Domain Protein
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MVEVYCVDAAHGDCILVVSNGVRILIDSGPKELKIRRQVKGTLGKLLPDKTVDLAIVTHNDDDHIGGFKTLISENTIIVK KILFNSVVSLNKILGKKTTKISYRQDKELSGFVKTTDIELISKHYDPKVDSNITVGELTVRIISPNYNALLDLGKWKEKE EAKLSRHKISGKEKNELSIMEYLKTFNTYRFESDMSPTNRSSLAVIIEGDGFKGLFLGDSHSKDIEEYFSTREPDECLFD VVKISHHGSRKNTSNELLKTVISKEFIICADKSSRHAHPDSLMMARLIGIKKSPVIHFSTDSDKLRMMLSEITDEATFTF PSEGVNRIVYV
Sequences:
>Translated_331_residues MVEVYCVDAAHGDCILVVSNGVRILIDSGPKELKIRRQVKGTLGKLLPDKTVDLAIVTHNDDDHIGGFKTLISENTIIVK KILFNSVVSLNKILGKKTTKISYRQDKELSGFVKTTDIELISKHYDPKVDSNITVGELTVRIISPNYNALLDLGKWKEKE EAKLSRHKISGKEKNELSIMEYLKTFNTYRFESDMSPTNRSSLAVIIEGDGFKGLFLGDSHSKDIEEYFSTREPDECLFD VVKISHHGSRKNTSNELLKTVISKEFIICADKSSRHAHPDSLMMARLIGIKKSPVIHFSTDSDKLRMMLSEITDEATFTF PSEGVNRIVYV >Mature_331_residues MVEVYCVDAAHGDCILVVSNGVRILIDSGPKELKIRRQVKGTLGKLLPDKTVDLAIVTHNDDDHIGGFKTLISENTIIVK KILFNSVVSLNKILGKKTTKISYRQDKELSGFVKTTDIELISKHYDPKVDSNITVGELTVRIISPNYNALLDLGKWKEKE EAKLSRHKISGKEKNELSIMEYLKTFNTYRFESDMSPTNRSSLAVIIEGDGFKGLFLGDSHSKDIEEYFSTREPDECLFD VVKISHHGSRKNTSNELLKTVISKEFIICADKSSRHAHPDSLMMARLIGIKKSPVIHFSTDSDKLRMMLSEITDEATFTF PSEGVNRIVYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37253; Mature: 37253
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEVYCVDAAHGDCILVVSNGVRILIDSGPKELKIRRQVKGTLGKLLPDKTVDLAIVTHN CEEEEEEECCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC DDDHIGGFKTLISENTIIVKKILFNSVVSLNKILGKKTTKISYRQDKELSGFVKTTDIEL CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECHHHH ISKHYDPKVDSNITVGELTVRIISPNYNALLDLGKWKEKEEAKLSRHKISGKEKNELSIM HHHCCCCCCCCCEEEEEEEEEEECCCCHHEEECCCCCCHHHHHHHHHHCCCCCCCHHHHH EYLKTFNTYRFESDMSPTNRSSLAVIIEGDGFKGLFLGDSHSKDIEEYFSTREPDECLFD HHHHHHCCEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHCCCCHHHHHHH VVKISHHGSRKNTSNELLKTVISKEFIICADKSSRHAHPDSLMMARLIGIKKSPVIHFST HHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEC DSDKLRMMLSEITDEATFTFPSEGVNRIVYV CCHHHHHHHHHHCCCCEEECCCCCCCEEEEC >Mature Secondary Structure MVEVYCVDAAHGDCILVVSNGVRILIDSGPKELKIRRQVKGTLGKLLPDKTVDLAIVTHN CEEEEEEECCCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEC DDDHIGGFKTLISENTIIVKKILFNSVVSLNKILGKKTTKISYRQDKELSGFVKTTDIEL CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECHHHH ISKHYDPKVDSNITVGELTVRIISPNYNALLDLGKWKEKEEAKLSRHKISGKEKNELSIM HHHCCCCCCCCCEEEEEEEEEEECCCCHHEEECCCCCCHHHHHHHHHHCCCCCCCHHHHH EYLKTFNTYRFESDMSPTNRSSLAVIIEGDGFKGLFLGDSHSKDIEEYFSTREPDECLFD HHHHHHCCEEEECCCCCCCCCCEEEEEECCCEEEEEECCCCCHHHHHHHCCCCHHHHHHH VVKISHHGSRKNTSNELLKTVISKEFIICADKSSRHAHPDSLMMARLIGIKKSPVIHFST HHHHHCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEC DSDKLRMMLSEITDEATFTFPSEGVNRIVYV CCHHHHHHHHHHCCCCEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA