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The map label for this gene is 167623340

Identifier: 167623340

GI number: 167623340

Start: 1703204

End: 1703524

Strand: Direct

Name: 167623340

Synonym: Shal_1409

Alternate gene names: NA

Gene position: 1703204-1703524 (Clockwise)

Preceding gene: 167623339

Following gene: 167623341

Centisome position: 32.59

GC content: 43.61

Gene sequence:

>321_bases
ATGAACAACAAAAAGCATGTGTTTGCTGAAGATAGTTTTTTTATATCCCGTCGCAAATTTATGGCCATCGGTGCGGCTTT
TATCGCAGTAATGGCGATTCCAGTAGGCTGGTTTGCAAGCAAAGTGGCCAAGCGAAATGACTATATAAAAGCACGTAGTG
CAGGTTTATATAAAGATGATGCGATTGCTAAGTTACGTGTGAGTCATGCTAACCCAGCGGTTGAAAAGTACTACAAAGAG
TTTGGCGGTCAGCCACTAGGACATATGTCCCACGACCTGCTGCACACTCACTTTGTTGACCGTACCAAGCTGAACTCTTA
A

Upstream 100 bases:

>100_bases
AAGTGATGAATTGCGCTGGTGGTTGCGTAAACGGCGGTGGCCAGCCTATTGACGGCAATGGTTCATCTTGGATTGGTAAT
ATCTAATAAGGAGCAACACC

Downstream 100 bases:

>100_bases
TGGAGATGAGATAATGCATCATAACTCGCATGACATGAGACCTATTCAGAAACACCCTCTTAATGTAAGAGTGTTTCATT
ATATTTTATTACTGAGCTTT

Product: iron hydrogenase small subunit

Products: NA

Alternate protein names: Hydrogenase Fe-Only; NADH Dehydrogenase; NAD(P)-Dependent Iron-Only Hydrogenase Catalytic Subunit; Periplasmic Fe Hydrogenase Small Subunit

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MNNKKHVFAEDSFFISRRKFMAIGAAFIAVMAIPVGWFASKVAKRNDYIKARSAGLYKDDAIAKLRVSHANPAVEKYYKE
FGGQPLGHMSHDLLHTHFVDRTKLNS

Sequences:

>Translated_106_residues
MNNKKHVFAEDSFFISRRKFMAIGAAFIAVMAIPVGWFASKVAKRNDYIKARSAGLYKDDAIAKLRVSHANPAVEKYYKE
FGGQPLGHMSHDLLHTHFVDRTKLNS
>Mature_106_residues
MNNKKHVFAEDSFFISRRKFMAIGAAFIAVMAIPVGWFASKVAKRNDYIKARSAGLYKDDAIAKLRVSHANPAVEKYYKE
FGGQPLGHMSHDLLHTHFVDRTKLNS

Specific function: Unknown

COG id: COG4624

COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11998; Mature: 11998

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKKHVFAEDSFFISRRKFMAIGAAFIAVMAIPVGWFASKVAKRNDYIKARSAGLYKDD
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
AIAKLRVSHANPAVEKYYKEFGGQPLGHMSHDLLHTHFVDRTKLNS
CHHEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNKKHVFAEDSFFISRRKFMAIGAAFIAVMAIPVGWFASKVAKRNDYIKARSAGLYKDD
CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
AIAKLRVSHANPAVEKYYKEFGGQPLGHMSHDLLHTHFVDRTKLNS
CHHEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA