| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is gltP [H]
Identifier: 167623336
GI number: 167623336
Start: 1697441
End: 1698706
Strand: Direct
Name: gltP [H]
Synonym: Shal_1405
Alternate gene names: 167623336
Gene position: 1697441-1698706 (Clockwise)
Preceding gene: 167623335
Following gene: 167623339
Centisome position: 32.47
GC content: 50.0
Gene sequence:
>1266_bases ATGTGGAATAAAGTTCGCGGCTCTCTGCCACTGCAGTTGGTTTTGGCTGCAGGCGCTGCCTGGCTATTCGCAACCTCGCT AACCTCTCTTGCTCACCCTAGCGTGATAGCCGAAGTTGAACGGCAAGCTTGGTATCAATTTTTAATGTTGGGTAAAACGG TCTATATCGGTTTACTGAAGATGGTCGTCGGTATCATGGTGATGCTGTCGTTAATCGAAGGGATCAGCAACATAGGCGCG ATAGCTAAGCTTAAAACCTTAGGCGGGCGTACGTTAGCGTTTTACACCTTTACCACCATGATTGCGGTAAGTCTTGGCTT AGGGGCATCCTTACTGCTGCCAGCTTGGCAACCGCTGACCCAGGCTGTGCCTTTAGCTGAGGGGGCTACGTTAATTGGTG AGCAGGCAGCGAGCGGCGGGGCGATTGCGACTAAGCTGCTGAATATGGCCTTAGTTAACCCTGTTGCGGCCATTGCTAGT GGCAATCTGCTTGCAGTGGTGGTGTTCTCTTTCATGTTTGGGATATCACTATTAACAGCATTACCGGAAAAGCATCCGCT ATTCGAGGTGATATCAGGCCTTAACAAAGGCATTAACACCATGGTGGGCGGTATTATTCGCCTGTCTCCACTGGCCATCT TCGCTATCGTTCTGGAGTTTTCCCTTAAAGGAAGTACGGCTCTATTTAGTCAATTAGCGCTGTTTGCACTTTTGGTTTTT GCACTAACCATGTTCCACGGGCTGGTGGTGTTACCTAGCTTGGCAAAGCTGCTGACTGGGATCAAAATATCCACGCTGTT TAAAGGTATTAGCGCCCCTTTAGCGATGGCCTTTGCGACCTCATCGAGTGCTGCAACCCTGCCTTTGTCGATGCGAAGTG CCCAGGAGCTTGGCGTATCACCCACCACTAGCAGTATGGTGTTACCGTTAGGGTCAGTGATGAATATGGACGGTACTGCG CTATTTGAAGGTGTCGCCGCGGTTTTTCTCGCGCAGCTATTTGGCGTCGATCTGACAACATCAGGCATAGTGATGATCTT TATCATGGCGATGGTGTCTTCTATTGGTGCCCCTGGAATGCCATCGGGGTCAATGTCGGGCATGCAGTTGGTGTTGCTTG CAGCAGGGATCCCCTTAGAAGCGATCGCAATCTTGCTGATCATTGAAAAGCCGTTAGATACCTTCCGCACTGCTGTGAAT GTTGAAGGCGATATCATCGCGGCCCTAGTCATTGATAAGTGGCAACGAAGCGAAGGTAATAACTAA
Upstream 100 bases:
>100_bases CCGCGATTGACTACCTATTCGTCAGTTGTTAAATACTAACTCTTTGCTATAGAGCATTAGCTCCTAGCTCGAAATCAATT AAGTTAATTTGGAATACCCC
Downstream 100 bases:
>100_bases TACCAAAGCCATGTTCAAAGTATTAAGGTCATCTAAGACGTTAATTTAGCCATCTTGAGGTTGAACCACAAAAGGGCTGC TTAGGTGACCAGCTGGTTAC
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MWNKVRGSLPLQLVLAAGAAWLFATSLTSLAHPSVIAEVERQAWYQFLMLGKTVYIGLLKMVVGIMVMLSLIEGISNIGA IAKLKTLGGRTLAFYTFTTMIAVSLGLGASLLLPAWQPLTQAVPLAEGATLIGEQAASGGAIATKLLNMALVNPVAAIAS GNLLAVVVFSFMFGISLLTALPEKHPLFEVISGLNKGINTMVGGIIRLSPLAIFAIVLEFSLKGSTALFSQLALFALLVF ALTMFHGLVVLPSLAKLLTGIKISTLFKGISAPLAMAFATSSSAATLPLSMRSAQELGVSPTTSSMVLPLGSVMNMDGTA LFEGVAAVFLAQLFGVDLTTSGIVMIFIMAMVSSIGAPGMPSGSMSGMQLVLLAAGIPLEAIAILLIIEKPLDTFRTAVN VEGDIIAALVIDKWQRSEGNN
Sequences:
>Translated_421_residues MWNKVRGSLPLQLVLAAGAAWLFATSLTSLAHPSVIAEVERQAWYQFLMLGKTVYIGLLKMVVGIMVMLSLIEGISNIGA IAKLKTLGGRTLAFYTFTTMIAVSLGLGASLLLPAWQPLTQAVPLAEGATLIGEQAASGGAIATKLLNMALVNPVAAIAS GNLLAVVVFSFMFGISLLTALPEKHPLFEVISGLNKGINTMVGGIIRLSPLAIFAIVLEFSLKGSTALFSQLALFALLVF ALTMFHGLVVLPSLAKLLTGIKISTLFKGISAPLAMAFATSSSAATLPLSMRSAQELGVSPTTSSMVLPLGSVMNMDGTA LFEGVAAVFLAQLFGVDLTTSGIVMIFIMAMVSSIGAPGMPSGSMSGMQLVLLAAGIPLEAIAILLIIEKPLDTFRTAVN VEGDIIAALVIDKWQRSEGNN >Mature_421_residues MWNKVRGSLPLQLVLAAGAAWLFATSLTSLAHPSVIAEVERQAWYQFLMLGKTVYIGLLKMVVGIMVMLSLIEGISNIGA IAKLKTLGGRTLAFYTFTTMIAVSLGLGASLLLPAWQPLTQAVPLAEGATLIGEQAASGGAIATKLLNMALVNPVAAIAS GNLLAVVVFSFMFGISLLTALPEKHPLFEVISGLNKGINTMVGGIIRLSPLAIFAIVLEFSLKGSTALFSQLALFALLVF ALTMFHGLVVLPSLAKLLTGIKISTLFKGISAPLAMAFATSSSAATLPLSMRSAQELGVSPTTSSMVLPLGSVMNMDGTA LFEGVAAVFLAQLFGVDLTTSGIVMIFIMAMVSSIGAPGMPSGSMSGMQLVLLAAGIPLEAIAILLIIEKPLDTFRTAVN VEGDIIAALVIDKWQRSEGNN
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI223468566, Length=273, Percent_Identity=35.5311355311355, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI223468564, Length=264, Percent_Identity=35.6060606060606, Blast_Score=146, Evalue=4e-35, Organism=Homo sapiens, GI5032093, Length=270, Percent_Identity=35.9259259259259, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI4827012, Length=278, Percent_Identity=34.8920863309352, Blast_Score=138, Evalue=9e-33, Organism=Homo sapiens, GI169790839, Length=315, Percent_Identity=31.4285714285714, Blast_Score=136, Evalue=4e-32, Organism=Homo sapiens, GI21314632, Length=296, Percent_Identity=31.0810810810811, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI66773030, Length=259, Percent_Identity=33.976833976834, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI194239697, Length=262, Percent_Identity=34.3511450381679, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI40254478, Length=260, Percent_Identity=33.8461538461538, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI301601644, Length=127, Percent_Identity=40.9448818897638, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI262359914, Length=240, Percent_Identity=31.25, Blast_Score=92, Evalue=9e-19, Organism=Escherichia coli, GI1790514, Length=383, Percent_Identity=30.5483028720627, Blast_Score=165, Evalue=4e-42, Organism=Escherichia coli, GI1789947, Length=370, Percent_Identity=25.4054054054054, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1788024, Length=400, Percent_Identity=26, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789473, Length=264, Percent_Identity=25.3787878787879, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71983106, Length=408, Percent_Identity=29.656862745098, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71983099, Length=408, Percent_Identity=29.656862745098, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71996953, Length=302, Percent_Identity=32.1192052980132, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI17537407, Length=382, Percent_Identity=29.0575916230367, Blast_Score=138, Evalue=7e-33, Organism=Caenorhabditis elegans, GI193206505, Length=253, Percent_Identity=35.5731225296443, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI193206654, Length=261, Percent_Identity=30.6513409961686, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17541374, Length=259, Percent_Identity=33.5907335907336, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI24583025, Length=259, Percent_Identity=28.957528957529, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI17137668, Length=259, Percent_Identity=28.957528957529, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI24583023, Length=259, Percent_Identity=28.957528957529, Blast_Score=114, Evalue=9e-26, Organism=Drosophila melanogaster, GI281360481, Length=274, Percent_Identity=27.3722627737226, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI281360483, Length=274, Percent_Identity=27.3722627737226, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI17137666, Length=274, Percent_Identity=27.3722627737226, Blast_Score=72, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43850; Mature: 43850
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNKVRGSLPLQLVLAAGAAWLFATSLTSLAHPSVIAEVERQAWYQFLMLGKTVYIGLLK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVVGIMVMLSLIEGISNIGAIAKLKTLGGRTLAFYTFTTMIAVSLGLGASLLLPAWQPLT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHH QAVPLAEGATLIGEQAASGGAIATKLLNMALVNPVAAIASGNLLAVVVFSFMFGISLLTA HHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LPEKHPLFEVISGLNKGINTMVGGIIRLSPLAIFAIVLEFSLKGSTALFSQLALFALLVF CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ALTMFHGLVVLPSLAKLLTGIKISTLFKGISAPLAMAFATSSSAATLPLSMRSAQELGVS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC PTTSSMVLPLGSVMNMDGTALFEGVAAVFLAQLFGVDLTTSGIVMIFIMAMVSSIGAPGM CCCCCHHHCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC PSGSMSGMQLVLLAAGIPLEAIAILLIIEKPLDTFRTAVNVEGDIIAALVIDKWQRSEGN CCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC N C >Mature Secondary Structure MWNKVRGSLPLQLVLAAGAAWLFATSLTSLAHPSVIAEVERQAWYQFLMLGKTVYIGLLK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVVGIMVMLSLIEGISNIGAIAKLKTLGGRTLAFYTFTTMIAVSLGLGASLLLPAWQPLT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCHHHH QAVPLAEGATLIGEQAASGGAIATKLLNMALVNPVAAIASGNLLAVVVFSFMFGISLLTA HHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LPEKHPLFEVISGLNKGINTMVGGIIRLSPLAIFAIVLEFSLKGSTALFSQLALFALLVF CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ALTMFHGLVVLPSLAKLLTGIKISTLFKGISAPLAMAFATSSSAATLPLSMRSAQELGVS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCC PTTSSMVLPLGSVMNMDGTALFEGVAAVFLAQLFGVDLTTSGIVMIFIMAMVSSIGAPGM CCCCCHHHCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC PSGSMSGMQLVLLAAGIPLEAIAILLIIEKPLDTFRTAVNVEGDIIAALVIDKWQRSEGN CCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]