The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623328

Identifier: 167623328

GI number: 167623328

Start: 1687760

End: 1688740

Strand: Direct

Name: 167623328

Synonym: Shal_1397

Alternate gene names: NA

Gene position: 1687760-1688740 (Clockwise)

Preceding gene: 167623325

Following gene: 167623329

Centisome position: 32.29

GC content: 42.51

Gene sequence:

>981_bases
ATGACTGTTCAACATGTGATGTTTCGCTGTGATGCATCAATCCAAGTCGGAATGGGTCATATCGTACGCTGTATCTGTTT
AGCCAATGCCTTTATCGAAGCCGGTCACCGGGTTACTTTTGTCATTAATAATGACGTCATTGCTATACAGGCTCTGGCAG
GACTTAACCTTGATATGCAGCTGTTTAAGCAGGCTGACTATTTAGAATGGTGTCAGCAGGTCATCGAACAACAGCGCCCC
GATATATTTATCGGTGATATCCGAGATGGTCTACCAATACAGGCGGTTGAGATGATGAAACAGGCTAATATCTTGACCGT
CGCAATCGACGAGCCTAGTGATTACCGTTTAGCTTGTGATTTACTGTTTTATCCACCGAGCCCGTTGGTTGAGGCGTTAA
ATTGGCAGGGCTTTAATGGCAAAAGGTATGCTGGTTGGGAATACTTGCTCGTAAGGGAGGAGTTTTATACACCATTTGTG
AAGTCTTGTAATCAGCCACAGAAGGTGCTGGTTATGATGGGAGGGACAGATCCCCAGCGTTTAACTTTAACCGTTATTGA
GCATTTTCGTCGATTAGATAGCCAGTTAGCCCTACATGTCGTTATTAAAGAGAGACATCCCGATTTTGCTCAATTGAGTA
GACAACAAGGGCAGTCTGTAAATTTAACCCTGCATTCCAACCCCGCAAATATAGCAAAGCTAATGCGGCAGATGGATTTT
GCCGTTATTACTTTTGGTATGAGCGCATACGAACTTGCTGTGCTAAAAGTACCAGCATTTCATATTTGTACCCAGCCTGA
TCATCACATTGCTAGCCAAAGCTTTGTTGACAAACAGATTGCCAAGTCGATTGGTGTCACTGAATTGGACAAAATTTGTT
TATTCGATTCTAAAGGTTGCTCAATTTCGAGTGGTATCGATAATATTATGAGTAAAATACTCGCGGCTCGATTTGTGCAA
GTAAATGATTATCCTTCTTAA

Upstream 100 bases:

>100_bases
ATTCAGTCGTAAGCAGATGACTCCTTTATTTTCGAGTGCTTTGTTTTAACCTGACGGGCGGCATTTAACCTATGGGTACG
AATATGAGTACTAAAACAAT

Downstream 100 bases:

>100_bases
TGCTAATGGTTTAGTCAATATGCCTCTCGCACTACTTTTAGTATTTTTTTATCGTCAAAATTTTATCGGTATGCATTTTG
CTTGTCACAGCTAATAATGC

Product: acylneuraminate cytidylyltransferase

Products: NA

Alternate protein names: Acylneuraminate Cytidylyltransferase; Polysaccharide Biosynthesis Protein Glycosyltransferase; CMP-N-Acetylneuraminic Acid Synthetase NeuA; Cytidylyltransferase Domain Protein; CMP-N-Acetylneuraminic Acid Synthetase; Glycosyltransferase

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTVQHVMFRCDASIQVGMGHIVRCICLANAFIEAGHRVTFVINNDVIAIQALAGLNLDMQLFKQADYLEWCQQVIEQQRP
DIFIGDIRDGLPIQAVEMMKQANILTVAIDEPSDYRLACDLLFYPPSPLVEALNWQGFNGKRYAGWEYLLVREEFYTPFV
KSCNQPQKVLVMMGGTDPQRLTLTVIEHFRRLDSQLALHVVIKERHPDFAQLSRQQGQSVNLTLHSNPANIAKLMRQMDF
AVITFGMSAYELAVLKVPAFHICTQPDHHIASQSFVDKQIAKSIGVTELDKICLFDSKGCSISSGIDNIMSKILAARFVQ
VNDYPS

Sequences:

>Translated_326_residues
MTVQHVMFRCDASIQVGMGHIVRCICLANAFIEAGHRVTFVINNDVIAIQALAGLNLDMQLFKQADYLEWCQQVIEQQRP
DIFIGDIRDGLPIQAVEMMKQANILTVAIDEPSDYRLACDLLFYPPSPLVEALNWQGFNGKRYAGWEYLLVREEFYTPFV
KSCNQPQKVLVMMGGTDPQRLTLTVIEHFRRLDSQLALHVVIKERHPDFAQLSRQQGQSVNLTLHSNPANIAKLMRQMDF
AVITFGMSAYELAVLKVPAFHICTQPDHHIASQSFVDKQIAKSIGVTELDKICLFDSKGCSISSGIDNIMSKILAARFVQ
VNDYPS
>Mature_325_residues
TVQHVMFRCDASIQVGMGHIVRCICLANAFIEAGHRVTFVINNDVIAIQALAGLNLDMQLFKQADYLEWCQQVIEQQRPD
IFIGDIRDGLPIQAVEMMKQANILTVAIDEPSDYRLACDLLFYPPSPLVEALNWQGFNGKRYAGWEYLLVREEFYTPFVK
SCNQPQKVLVMMGGTDPQRLTLTVIEHFRRLDSQLALHVVIKERHPDFAQLSRQQGQSVNLTLHSNPANIAKLMRQMDFA
VITFGMSAYELAVLKVPAFHICTQPDHHIASQSFVDKQIAKSIGVTELDKICLFDSKGCSISSGIDNIMSKILAARFVQV
NDYPS

Specific function: Unknown

COG id: COG3980

COG function: function code M; Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36762; Mature: 36631

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVQHVMFRCDASIQVGMGHIVRCICLANAFIEAGHRVTFVINNDVIAIQALAGLNLDMQ
CCHHHEEEEECCCEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCHH
LFKQADYLEWCQQVIEQQRPDIFIGDIRDGLPIQAVEMMKQANILTVAIDEPSDYRLACD
HHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCCCEEEEE
LLFYPPSPLVEALNWQGFNGKRYAGWEYLLVREEFYTPFVKSCNQPQKVLVMMGGTDPQR
EEECCCCHHHHHHCCCCCCCCEECCEEEEEEEHHHCCHHHHCCCCCCEEEEEECCCCCHH
LTLTVIEHFRRLDSQLALHVVIKERHPDFAQLSRQQGQSVNLTLHSNPANIAKLMRQMDF
HHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCC
AVITFGMSAYELAVLKVPAFHICTQPDHHIASQSFVDKQIAKSIGVTELDKICLFDSKGC
EEEEECCCHHEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCC
SISSGIDNIMSKILAARFVQVNDYPS
CCHHHHHHHHHHHHHHHHEEECCCCC
>Mature Secondary Structure 
TVQHVMFRCDASIQVGMGHIVRCICLANAFIEAGHRVTFVINNDVIAIQALAGLNLDMQ
CHHHEEEEECCCEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCHH
LFKQADYLEWCQQVIEQQRPDIFIGDIRDGLPIQAVEMMKQANILTVAIDEPSDYRLACD
HHHCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCCCEEEEE
LLFYPPSPLVEALNWQGFNGKRYAGWEYLLVREEFYTPFVKSCNQPQKVLVMMGGTDPQR
EEECCCCHHHHHHCCCCCCCCEECCEEEEEEEHHHCCHHHHCCCCCCEEEEEECCCCCHH
LTLTVIEHFRRLDSQLALHVVIKERHPDFAQLSRQQGQSVNLTLHSNPANIAKLMRQMDF
HHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCC
AVITFGMSAYELAVLKVPAFHICTQPDHHIASQSFVDKQIAKSIGVTELDKICLFDSKGC
EEEEECCCHHEEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCC
SISSGIDNIMSKILAARFVQVNDYPS
CCHHHHHHHHHHHHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA