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The map label for this gene is acrR [C]

Identifier: 167623320

GI number: 167623320

Start: 1677418

End: 1678032

Strand: Direct

Name: acrR [C]

Synonym: Shal_1389

Alternate gene names: 167623320

Gene position: 1677418-1678032 (Clockwise)

Preceding gene: 167623315

Following gene: 167623324

Centisome position: 32.09

GC content: 44.07

Gene sequence:

>615_bases
ATGAATTCACCAGTATTGAGTCGAAGTGAGCAAAAGCGTGAGCAGATCTTACAGGCTGCAAAAGATCTCTTTTGCGAGCA
GGGTTTTCCCAATACCAGCATGGATGAAGTGGCTAAGTTAGCGGGTGTGTCAAAACAAACGGTGTACTCTCATTTTGGTT
GTAAAGACGATCTCTTCGTCGCATCAATTGAATCCAAGTGTCTAGTTCATGGGGTTAATCAAGAGGTATTCTCCGATCCC
ACTATGCCAGAAGATAGTTTATTGTTATTTGCCAAACATTTTGGTGAGGTGATAACCAGCCCTGAAGCGGTAACTGTGTT
TAAGGCCTGTGTTGCCCAAGCAGACTCGCATCCAGAGCTCTCAGAGCTGTTTTATAGCGCTGGACCTCAGCATATTTTAG
GATTATTAAGAGATTATTTAACCCGCGTGTCTGAGCTTGGTGTGTATCACTTTGCTAACCCACATCACTGCGCCGTGCGT
CTTTGTTTGATGATTTTTGGTGAGATGCGTATGCGACTGGATTTAGGCTTAGATGTGAGCGATCTTCTCGATACCCGAGA
GCAATATATTAACGAGACCGTAGAGATGTTTTTAAGAGCGTATAGAGTCCGTTAG

Upstream 100 bases:

>100_bases
TCCAGTCCATTTTTCAGCTAAATGGACTGAGTAGTCCATATTGTGCTTAAATAGCACTATTGATTTAGCAACAAGGCCAA
GCGCCGGAGTGAAGCCCTTT

Downstream 100 bases:

>100_bases
TGATTAGAATCATAAAAAAAGGAGCGAATAGCTCCTTTTATTTTTATTGATTATCTTTTTGGCTAAGACTACTCGCCCAA
CATCGCTTCTTTTAAGCTGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator Protein; Bacterial Regulatory Protein; TetR Family Transcriptional Regulatory Protein; TetR-Type Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR/AcrR Family; Bacterial Regulatory Protein TetR Family Protein; Transcriptional Regulator Protein TetR Family; Transcription Regulator Protein Tetr Family; TetR Family Regulatory Protein; TetR-Like Virulence Regulator; TetR Family Transcriptional RegulatoR; Regulatory Protein Tetr; Calsymin Transcriptional Regulator; Transcriptional Regulator Tetr Family; Transcription Regulator Protein TetR Family; Transcriptional Regulator TetR; TetR Family Regulatory; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNSPVLSRSEQKREQILQAAKDLFCEQGFPNTSMDEVAKLAGVSKQTVYSHFGCKDDLFVASIESKCLVHGVNQEVFSDP
TMPEDSLLLFAKHFGEVITSPEAVTVFKACVAQADSHPELSELFYSAGPQHILGLLRDYLTRVSELGVYHFANPHHCAVR
LCLMIFGEMRMRLDLGLDVSDLLDTREQYINETVEMFLRAYRVR

Sequences:

>Translated_204_residues
MNSPVLSRSEQKREQILQAAKDLFCEQGFPNTSMDEVAKLAGVSKQTVYSHFGCKDDLFVASIESKCLVHGVNQEVFSDP
TMPEDSLLLFAKHFGEVITSPEAVTVFKACVAQADSHPELSELFYSAGPQHILGLLRDYLTRVSELGVYHFANPHHCAVR
LCLMIFGEMRMRLDLGLDVSDLLDTREQYINETVEMFLRAYRVR
>Mature_204_residues
MNSPVLSRSEQKREQILQAAKDLFCEQGFPNTSMDEVAKLAGVSKQTVYSHFGCKDDLFVASIESKCLVHGVNQEVFSDP
TMPEDSLLLFAKHFGEVITSPEAVTVFKACVAQADSHPELSELFYSAGPQHILGLLRDYLTRVSELGVYHFANPHHCAVR
LCLMIFGEMRMRLDLGLDVSDLLDTREQYINETVEMFLRAYRVR

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23036; Mature: 23036

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPVLSRSEQKREQILQAAKDLFCEQGFPNTSMDEVAKLAGVSKQTVYSHFGCKDDLFV
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCHHH
ASIESKCLVHGVNQEVFSDPTMPEDSLLLFAKHFGEVITSPEAVTVFKACVAQADSHPEL
HHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHH
SELFYSAGPQHILGLLRDYLTRVSELGVYHFANPHHCAVRLCLMIFGEMRMRLDLGLDVS
HHHHHCCCHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
DLLDTREQYINETVEMFLRAYRVR
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSPVLSRSEQKREQILQAAKDLFCEQGFPNTSMDEVAKLAGVSKQTVYSHFGCKDDLFV
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCHHH
ASIESKCLVHGVNQEVFSDPTMPEDSLLLFAKHFGEVITSPEAVTVFKACVAQADSHPEL
HHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHH
SELFYSAGPQHILGLLRDYLTRVSELGVYHFANPHHCAVRLCLMIFGEMRMRLDLGLDVS
HHHHHCCCHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
DLLDTREQYINETVEMFLRAYRVR
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA