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The map label for this gene is rodZ [H]

Identifier: 167623298

GI number: 167623298

Start: 1640935

End: 1641918

Strand: Direct

Name: rodZ [H]

Synonym: Shal_1366

Alternate gene names: 167623298

Gene position: 1640935-1641918 (Clockwise)

Preceding gene: 167623297

Following gene: 167623299

Centisome position: 31.39

GC content: 46.95

Gene sequence:

>984_bases
ATGAAAAATGAACAGAATCAAGAGCCCAATGTAGACAACGAAAGCCTAGTGGATGAGCCGACGCTCACACTGGGCGTTTT
GCTAAAAACAGCCCGAGAAAGTAAGGGCTTGTCGATAGAGGCTATAGCATCACAATTGCATTTGCGCCCTACTATCATTC
AAGAGATTGAGGCTGATAATTTACAAGCAGTGGGTGCTGCGACTTATGTGCGAGGCTATGTGAAAAACTATGCTCGTGCA
GTCCAAGCAGACCCGTTCACGGTACAAGAATGCTTAGATAAGCAGCTTGAGAGTGAAGAAAAACCGTCAATGCAGAGTTT
TTCGCGTAAGACCACACATCAGGCTCGTGATGGCCGCTTAATGGCTCTCACTTATATTATCGTATTTGTGTTACTTGGCC
TGATGGTACTTTGGTGGTTTCAAAAGTCCTCTATGGATTCCGCTGTAGATTATTCACAGCCAACCGCAGAAGAGGTTGCC
GCTTCTGCAGAAGTCGGTCTTGCCAACCCTATAGATGCATTATTAGTCGATAACAGCGATTCTGGTGTCGAGCAAATGGC
ATCCTCGAGTGAAGAGCCAGCTGAAAGTGCAGTTAGCACTGCTCAAGATGCGCCAACTGCGGCCTCTAATGAACAGTCAC
AAACAACTCAGTCACCAGCAGCAACGCAGGCGACTGAGCCAGCCCAGATAGAACCTAACGCTCAAGCGTCTGCTGAGAGT
GAAGATAAGGTCTTGGGTTCGACCCTTACGCTATCCTTAACAGGTGACTGCTGGATAAAAGTGACCGATGGCAATGGTAA
CGTATTGGTCAGTGACCTTAAAAAATCGGGCAGCGAAATTAATCTCAAAGGGGCTGAGCCGTTTTCGGTGACCTTAGGAG
CCCCTCAAGTTGTTAACATCCAACTAAACGGTAAATCCATTAGTTTGGATCAGTATCCTAGCGGTAAGGTGGCAAAAATG
ACATTGCCACACGCTGGACAATAA

Upstream 100 bases:

>100_bases
GTTTGAATGACGCAGATGCGGTAAGACGATTTGGTATCTTATTACTGGCAAAGTTTCCGCAGTCGATTCAGGCCAAACAA
TATCGGGCTAGTATGCATTA

Downstream 100 bases:

>100_bases
CAGATCACAGAGCACAAAGACGATGTATAACGAATCTCCAATTATCAGACGCAAATCAAGCCGAATTTATGTCGGTAATG
TACCTATTGGTGATGGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARESKGLSIEAIASQLHLRPTIIQEIEADNLQAVGAATYVRGYVKNYARA
VQADPFTVQECLDKQLESEEKPSMQSFSRKTTHQARDGRLMALTYIIVFVLLGLMVLWWFQKSSMDSAVDYSQPTAEEVA
ASAEVGLANPIDALLVDNSDSGVEQMASSSEEPAESAVSTAQDAPTAASNEQSQTTQSPAATQATEPAQIEPNAQASAES
EDKVLGSTLTLSLTGDCWIKVTDGNGNVLVSDLKKSGSEINLKGAEPFSVTLGAPQVVNIQLNGKSISLDQYPSGKVAKM
TLPHAGQ

Sequences:

>Translated_327_residues
MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARESKGLSIEAIASQLHLRPTIIQEIEADNLQAVGAATYVRGYVKNYARA
VQADPFTVQECLDKQLESEEKPSMQSFSRKTTHQARDGRLMALTYIIVFVLLGLMVLWWFQKSSMDSAVDYSQPTAEEVA
ASAEVGLANPIDALLVDNSDSGVEQMASSSEEPAESAVSTAQDAPTAASNEQSQTTQSPAATQATEPAQIEPNAQASAES
EDKVLGSTLTLSLTGDCWIKVTDGNGNVLVSDLKKSGSEINLKGAEPFSVTLGAPQVVNIQLNGKSISLDQYPSGKVAKM
TLPHAGQ
>Mature_327_residues
MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARESKGLSIEAIASQLHLRPTIIQEIEADNLQAVGAATYVRGYVKNYARA
VQADPFTVQECLDKQLESEEKPSMQSFSRKTTHQARDGRLMALTYIIVFVLLGLMVLWWFQKSSMDSAVDYSQPTAEEVA
ASAEVGLANPIDALLVDNSDSGVEQMASSSEEPAESAVSTAQDAPTAASNEQSQTTQSPAATQATEPAQIEPNAQASAES
EDKVLGSTLTLSLTGDCWIKVTDGNGNVLVSDLKKSGSEINLKGAEPFSVTLGAPQVVNIQLNGKSISLDQYPSGKVAKM
TLPHAGQ

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=319, Percent_Identity=31.0344827586207, Blast_Score=145, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 34925; Mature: 34925

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARESKGLSIEAIASQLHLRPTIIQEIEADN
CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCC
LQAVGAATYVRGYVKNYARAVQADPFTVQECLDKQLESEEKPSMQSFSRKTTHQARDGRL
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
MALTYIIVFVLLGLMVLWWFQKSSMDSAVDYSQPTAEEVAASAEVGLANPIDALLVDNSD
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHCCCCCCCCCEEEECCCC
SGVEQMASSSEEPAESAVSTAQDAPTAASNEQSQTTQSPAATQATEPAQIEPNAQASAES
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EDKVLGSTLTLSLTGDCWIKVTDGNGNVLVSDLKKSGSEINLKGAEPFSVTLGAPQVVNI
CHHHCCEEEEEEEECCEEEEEECCCCCEEEEEHHHCCCEEEECCCCCEEEEECCCEEEEE
QLNGKSISLDQYPSGKVAKMTLPHAGQ
EECCCEEECCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARESKGLSIEAIASQLHLRPTIIQEIEADN
CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHCCCC
LQAVGAATYVRGYVKNYARAVQADPFTVQECLDKQLESEEKPSMQSFSRKTTHQARDGRL
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
MALTYIIVFVLLGLMVLWWFQKSSMDSAVDYSQPTAEEVAASAEVGLANPIDALLVDNSD
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHCCCCCCCCCEEEECCCC
SGVEQMASSSEEPAESAVSTAQDAPTAASNEQSQTTQSPAATQATEPAQIEPNAQASAES
HHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
EDKVLGSTLTLSLTGDCWIKVTDGNGNVLVSDLKKSGSEINLKGAEPFSVTLGAPQVVNI
CHHHCCEEEEEEEECCEEEEEECCCCCEEEEEHHHCCCEEEECCCCCEEEEECCCEEEEE
QLNGKSISLDQYPSGKVAKMTLPHAGQ
EECCCEEECCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA