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The map label for this gene is 167623297

Identifier: 167623297

GI number: 167623297

Start: 1640135

End: 1640935

Strand: Direct

Name: 167623297

Synonym: Shal_1365

Alternate gene names: NA

Gene position: 1640135-1640935 (Clockwise)

Preceding gene: 167623296

Following gene: 167623298

Centisome position: 31.38

GC content: 43.82

Gene sequence:

>801_bases
ATGGGCGCAACAATGAATCAGAGTAAGGTGGTGTTGCCACTGGTATTAATATTGTCATCTATGGTGACAACGGGGTGCGT
GACCCAAGATACCTATGCAGGGACCGATATCCCTGTCTCTGAACGAAAAGTCGATAAGGTTTCTGCTGCACGTCAGCGGA
TACAGCTCGGTTTAACCTATCTACAAAAAGGTAATAGTGAACAAGCCAAAGCGAACCTCGATCGAGCGTTGGCTTTTGCT
CCAAATTTGGAAGAAGTTCATATTGCCTTTGCTTATTACTATCAATCCGTAGGTGAACTAGAGAAAACAGAACAAGCATA
CAGAAAAGCGATAAATGCGAGTGACGCCACGGGTGACTCGTACAATAACTTCGGTGCATTTTTGTGTCAGCAGGGTAAAT
ATGCTGAATCAGAAAAGATGTTTCTCAAAGCGGTTGATCAACCTCTGTATACTCGCTCGGCGTCCACCTATGAAAATTTA
GGTATTTGTAGCCGTAAAGCGGGTAAAATTAGCCAAGCGAAAAAATATTTTGCAATGGCGCTGCAGTACGACTCTAGACG
ACGTACCTCTCTTATTGAACTCACTGAGATCGATTTAGAAGAGGGTGAGTATGTTGATGCTAGAGAACAGTTATCTCGTT
ACCATAGGGTAGCGGCAGAGTCTGCAACCAGTCTGTCGCTCGGGATTAAAATTGAACAAGGTTTGAATGACGCAGATGCG
GTAAGACGATTTGGTATCTTATTACTGGCAAAGTTTCCGCAGTCGATTCAGGCCAAACAATATCGGGCTAGTATGCATTA
A

Upstream 100 bases:

>100_bases
CCGGTGATATTCGCGATAGAACCAAGCGTTTAGCGAAAAAACAAATGCAAGAGAGCCAAATTTCAGTCACAATGAACTAA
CTCTTTGTATCTACAGGTAG

Downstream 100 bases:

>100_bases
TGAAAAATGAACAGAATCAAGAGCCCAATGTAGACAACGAAAGCCTAGTGGATGAGCCGACGCTCACACTGGGCGTTTTG
CTAAAAACAGCCCGAGAAAG

Product: type IV pilus biogenesis/stability protein PilW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MGATMNQSKVVLPLVLILSSMVTTGCVTQDTYAGTDIPVSERKVDKVSAARQRIQLGLTYLQKGNSEQAKANLDRALAFA
PNLEEVHIAFAYYYQSVGELEKTEQAYRKAINASDATGDSYNNFGAFLCQQGKYAESEKMFLKAVDQPLYTRSASTYENL
GICSRKAGKISQAKKYFAMALQYDSRRRTSLIELTEIDLEEGEYVDAREQLSRYHRVAAESATSLSLGIKIEQGLNDADA
VRRFGILLLAKFPQSIQAKQYRASMH

Sequences:

>Translated_266_residues
MGATMNQSKVVLPLVLILSSMVTTGCVTQDTYAGTDIPVSERKVDKVSAARQRIQLGLTYLQKGNSEQAKANLDRALAFA
PNLEEVHIAFAYYYQSVGELEKTEQAYRKAINASDATGDSYNNFGAFLCQQGKYAESEKMFLKAVDQPLYTRSASTYENL
GICSRKAGKISQAKKYFAMALQYDSRRRTSLIELTEIDLEEGEYVDAREQLSRYHRVAAESATSLSLGIKIEQGLNDADA
VRRFGILLLAKFPQSIQAKQYRASMH
>Mature_265_residues
GATMNQSKVVLPLVLILSSMVTTGCVTQDTYAGTDIPVSERKVDKVSAARQRIQLGLTYLQKGNSEQAKANLDRALAFAP
NLEEVHIAFAYYYQSVGELEKTEQAYRKAINASDATGDSYNNFGAFLCQQGKYAESEKMFLKAVDQPLYTRSASTYENLG
ICSRKAGKISQAKKYFAMALQYDSRRRTSLIELTEIDLEEGEYVDAREQLSRYHRVAAESATSLSLGIKIEQGLNDADAV
RRFGILLLAKFPQSIQAKQYRASMH

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013360
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29616; Mature: 29485

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGATMNQSKVVLPLVLILSSMVTTGCVTQDTYAGTDIPVSERKVDKVSAARQRIQLGLTY
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LQKGNSEQAKANLDRALAFAPNLEEVHIAFAYYYQSVGELEKTEQAYRKAINASDATGDS
HHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
YNNFGAFLCQQGKYAESEKMFLKAVDQPLYTRSASTYENLGICSRKAGKISQAKKYFAMA
CCCHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHH
LQYDSRRRTSLIELTEIDLEEGEYVDAREQLSRYHRVAAESATSLSLGIKIEQGLNDADA
HHHCCCHHHHEEEHEECCCCCCCEECHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHH
VRRFGILLLAKFPQSIQAKQYRASMH
HHHHHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure 
GATMNQSKVVLPLVLILSSMVTTGCVTQDTYAGTDIPVSERKVDKVSAARQRIQLGLTY
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LQKGNSEQAKANLDRALAFAPNLEEVHIAFAYYYQSVGELEKTEQAYRKAINASDATGDS
HHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
YNNFGAFLCQQGKYAESEKMFLKAVDQPLYTRSASTYENLGICSRKAGKISQAKKYFAMA
CCCHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHH
LQYDSRRRTSLIELTEIDLEEGEYVDAREQLSRYHRVAAESATSLSLGIKIEQGLNDADA
HHHCCCHHHHEEEHEECCCCCCCEECHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHH
VRRFGILLLAKFPQSIQAKQYRASMH
HHHHHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]