| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623289
Identifier: 167623289
GI number: 167623289
Start: 1632310
End: 1633053
Strand: Reverse
Name: 167623289
Synonym: Shal_1357
Alternate gene names: NA
Gene position: 1633053-1632310 (Counterclockwise)
Preceding gene: 167623294
Following gene: 167623288
Centisome position: 31.24
GC content: 43.82
Gene sequence:
>744_bases ATGATCATACTCGTCGGTGGCGAAAAAGGTGGTAGTGGTAAAAGTTGCCTAGCCCAAAATGTCGCTGTATTTCTAACAGC AGAATGCCAAGCCTCAGTCATTATGGTTGATTGCGATCCTCAGCGTACGACGTCAGATTGGATCCATGCTCGCAATAATA ACGCCGATTTGCCAAGCATTAATTGTGTACAACTTTACGGTAAAATCCGTAATGATCTTCTCAGCTTAGAGCAGCATTAT GACTACGTCATAGTCGATTGTGGCGGCCAAGATAACTTAGCACTACGTGCAACTATGTCTGTCGCTTCGCACGTACTGAT GCCACTACGCCCTAAACGCCGAGATCTGAAAACCGTTAGCCACATGGATGATATCGTTGCTACTTGTATGATGATAAACC CTAAAATGCGCGCCACATTTGTTATTACCCAATGCCCTAGTTTGCCTAACCAAGCCAACCGTATCTTGGAAGCAAAAGAA GTTTGTAAGACATACGACATCAATGTGTTAGACGCGATTACCTACAGCAGAAACATCTATGATGACAGCGAAGAATCTGG TCTATCGGTACTCGAAATTGAACCTAAGGGCAAAGCCGCAAGCGAAATTAGAGGCATTGCCTGTGAAATGCTACAAGTCA ATAATGCAACTGAAATTCGCAATCACCTTGCTGAAAAACACATGAACAAGATGAGAGGTAATTATGGGTCTGGCAGATCT CAAGAAAAACTCTACGCCGTCTAG
Upstream 100 bases:
>100_bases CGTTATTAACAATAATCGTATCATCAGTACGCAAATGGTTACTAACCTTCACTGTTCTAATTGAGAAAAATAAATTCACC GCGTACAAGAGGAAAACAAT
Downstream 100 bases:
>100_bases TTCAACTCATAGGCAGATCCAAACGAGCCAACTGGCACTCGATGATCTGATTGATGACTTTATTAACGATGCGAGTCGTT ACGCTTCAGGCCAAGAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Cobyrinic Acid A C-Diamide Synthase; Partition Protein; ParA Family Protein; Plasmid Partitioning Protein; ParA-Like Protein; Plasmid Partition Protein ParA; Partitioning Protein; ATPase Involved In Chromosome Partitioning-Like Protein; ParA Protein; Plasmid Partition Protein ParA-Like Protein; PARA Protein; Plasmid Stability Protein ParA; ATPases Involved In Chromosome Partitioning; Chromosome Partitioning; ATPase; Chromosome Partitioning Protein; CobQ/CobB/MinD/ParA Domain-Containing Protein; MinD/ParA Family ATPase; Plasmid Partitioning-Family Protein; Partition Protein A; ParA Partitioning-Like Protein; Chromosome Partitioning Protein ParA; Partition Protein ATPase Activity; ParA Partitioning Protein; Plasmid Segregation Oscillating ATPase ParF; Partitioning Protein ParA-Family; ATPase ParA Type; Partitioning Protein ParA Family; ParA Plasmid Partitioning Protein; Plasmid Stability Protein; Chromosome Partitioning ATPase ParA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MIILVGGEKGGSGKSCLAQNVAVFLTAECQASVIMVDCDPQRTTSDWIHARNNNADLPSINCVQLYGKIRNDLLSLEQHY DYVIVDCGGQDNLALRATMSVASHVLMPLRPKRRDLKTVSHMDDIVATCMMINPKMRATFVITQCPSLPNQANRILEAKE VCKTYDINVLDAITYSRNIYDDSEESGLSVLEIEPKGKAASEIRGIACEMLQVNNATEIRNHLAEKHMNKMRGNYGSGRS QEKLYAV
Sequences:
>Translated_247_residues MIILVGGEKGGSGKSCLAQNVAVFLTAECQASVIMVDCDPQRTTSDWIHARNNNADLPSINCVQLYGKIRNDLLSLEQHY DYVIVDCGGQDNLALRATMSVASHVLMPLRPKRRDLKTVSHMDDIVATCMMINPKMRATFVITQCPSLPNQANRILEAKE VCKTYDINVLDAITYSRNIYDDSEESGLSVLEIEPKGKAASEIRGIACEMLQVNNATEIRNHLAEKHMNKMRGNYGSGRS QEKLYAV >Mature_247_residues MIILVGGEKGGSGKSCLAQNVAVFLTAECQASVIMVDCDPQRTTSDWIHARNNNADLPSINCVQLYGKIRNDLLSLEQHY DYVIVDCGGQDNLALRATMSVASHVLMPLRPKRRDLKTVSHMDDIVATCMMINPKMRATFVITQCPSLPNQANRILEAKE VCKTYDINVLDAITYSRNIYDDSEESGLSVLEIEPKGKAASEIRGIACEMLQVNNATEIRNHLAEKHMNKMRGNYGSGRS QEKLYAV
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27394; Mature: 27394
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIILVGGEKGGSGKSCLAQNVAVFLTAECQASVIMVDCDPQRTTSDWIHARNNNADLPSI CEEEEECCCCCCCHHHHHCCEEEEEEECCCEEEEEEECCCCCCCCHHHEECCCCCCCCCC NCVQLYGKIRNDLLSLEQHYDYVIVDCGGQDNLALRATMSVASHVLMPLRPKRRDLKTVS HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHH HMDDIVATCMMINPKMRATFVITQCPSLPNQANRILEAKEVCKTYDINVLDAITYSRNIY HHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC DDSEESGLSVLEIEPKGKAASEIRGIACEMLQVNNATEIRNHLAEKHMNKMRGNYGSGRS CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCC QEKLYAV CCCEECC >Mature Secondary Structure MIILVGGEKGGSGKSCLAQNVAVFLTAECQASVIMVDCDPQRTTSDWIHARNNNADLPSI CEEEEECCCCCCCHHHHHCCEEEEEEECCCEEEEEEECCCCCCCCHHHEECCCCCCCCCC NCVQLYGKIRNDLLSLEQHYDYVIVDCGGQDNLALRATMSVASHVLMPLRPKRRDLKTVS HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHH HMDDIVATCMMINPKMRATFVITQCPSLPNQANRILEAKEVCKTYDINVLDAITYSRNIY HHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC DDSEESGLSVLEIEPKGKAASEIRGIACEMLQVNNATEIRNHLAEKHMNKMRGNYGSGRS CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCC QEKLYAV CCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA