Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623266

Identifier: 167623266

GI number: 167623266

Start: 1608988

End: 1609254

Strand: Direct

Name: 167623266

Synonym: Shal_1333

Alternate gene names: NA

Gene position: 1608988-1609254 (Clockwise)

Preceding gene: 167623265

Following gene: 167623267

Centisome position: 30.78

GC content: 42.7

Gene sequence:

>267_bases
GTGAATGACAGCCTAGATTGGATCCGTGTGTTCTTAGCGATTTGCGGCATTGTGCTCACAATCTTAGTGCCGCTGTTAGC
CAGCATATTTAACAGCCAAAAGAATACCGCCAAAGAGCTAAGCGACCATAAAACCCATGTGGCCGAAAACTATGCCACCA
AAGATGACGTAAAAGATTTGGGCGACCGTATCGAGCGCCAAATGAAAGACGGTTTCACTAACTTAAAAGACTTTTTTAAT
AACAGAAAAAACAAGGATTCAGCATGA

Upstream 100 bases:

>100_bases
GCACACCAGAGTTGCCGCTAGAGGTAATGATGGAGTTAACCCTCGCCATGCTAGGTCTTGCAGGCCTACGCACGGTCGAA
AAGATTAAGGGAGTAGCGAA

Downstream 100 bases:

>100_bases
AAAAGCCAATCGTATTAACCATCGCAGGCAGTGACATTAGCTTTACCGTGACCACAGACGACTATAACGCTTATCTGAAT
GAAATTATGCCAGATAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MNDSLDWIRVFLAICGIVLTILVPLLASIFNSQKNTAKELSDHKTHVAENYATKDDVKDLGDRIERQMKDGFTNLKDFFN
NRKNKDSA

Sequences:

>Translated_88_residues
MNDSLDWIRVFLAICGIVLTILVPLLASIFNSQKNTAKELSDHKTHVAENYATKDDVKDLGDRIERQMKDGFTNLKDFFN
NRKNKDSA
>Mature_88_residues
MNDSLDWIRVFLAICGIVLTILVPLLASIFNSQKNTAKELSDHKTHVAENYATKDDVKDLGDRIERQMKDGFTNLKDFFN
NRKNKDSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10058; Mature: 10058

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSLDWIRVFLAICGIVLTILVPLLASIFNSQKNTAKELSDHKTHVAENYATKDDVKDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
GDRIERQMKDGFTNLKDFFNNRKNKDSA
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNDSLDWIRVFLAICGIVLTILVPLLASIFNSQKNTAKELSDHKTHVAENYATKDDVKDL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
GDRIERQMKDGFTNLKDFFNNRKNKDSA
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA