Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623267

Identifier: 167623267

GI number: 167623267

Start: 1609251

End: 1609514

Strand: Direct

Name: 167623267

Synonym: Shal_1334

Alternate gene names: NA

Gene position: 1609251-1609514 (Clockwise)

Preceding gene: 167623266

Following gene: 167623268

Centisome position: 30.79

GC content: 46.21

Gene sequence:

>264_bases
ATGAAAAAGCCAATCGTATTAACCATCGCAGGCAGTGACATTAGCTTTACCGTGACCACAGACGACTATAACGCTTATCT
GAATGAAATTATGCCAGATAACAAAGTCGCGCCAGCCCATAACTTGGTGATGCGTACCGTCGACACTGACCACAAAGAGC
AGCTGCGTGGCGTTCTGGATAACTCGCCAGGTGCATCGATGCAAATTGCGGGTTTACTCACTCAGCAGTTTGCACCAGCG
ATTGAAATTGCCGTAAAAAAATAA

Upstream 100 bases:

>100_bases
ATGACGTAAAAGATTTGGGCGACCGTATCGAGCGCCAAATGAAAGACGGTTTCACTAACTTAAAAGACTTTTTTAATAAC
AGAAAAAACAAGGATTCAGC

Downstream 100 bases:

>100_bases
ATGCGCTGGTTGACGCCATAGGCAACAACCAGCTTGAGCAATTGCTCATTGTGCGGCGGCATTTGCTACCGCACGAAGAT
GACAGCGAAATCAGTATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Gene

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKKPIVLTIAGSDISFTVTTDDYNAYLNEIMPDNKVAPAHNLVMRTVDTDHKEQLRGVLDNSPGASMQIAGLLTQQFAPA
IEIAVKK

Sequences:

>Translated_87_residues
MKKPIVLTIAGSDISFTVTTDDYNAYLNEIMPDNKVAPAHNLVMRTVDTDHKEQLRGVLDNSPGASMQIAGLLTQQFAPA
IEIAVKK
>Mature_87_residues
MKKPIVLTIAGSDISFTVTTDDYNAYLNEIMPDNKVAPAHNLVMRTVDTDHKEQLRGVLDNSPGASMQIAGLLTQQFAPA
IEIAVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9483; Mature: 9483

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPIVLTIAGSDISFTVTTDDYNAYLNEIMPDNKVAPAHNLVMRTVDTDHKEQLRGVLD
CCCCEEEEEECCCEEEEEEECCHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCC
NSPGASMQIAGLLTQQFAPAIEIAVKK
CCCCCCEEHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MKKPIVLTIAGSDISFTVTTDDYNAYLNEIMPDNKVAPAHNLVMRTVDTDHKEQLRGVLD
CCCCEEEEEECCCEEEEEEECCHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHCC
NSPGASMQIAGLLTQQFAPAIEIAVKK
CCCCCCEEHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA