| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
Click here to switch to the map view.
The map label for this gene is 167623245
Identifier: 167623245
GI number: 167623245
Start: 1592876
End: 1593112
Strand: Direct
Name: 167623245
Synonym: Shal_1312
Alternate gene names: NA
Gene position: 1592876-1593112 (Clockwise)
Preceding gene: 167623244
Following gene: 167623246
Centisome position: 30.47
GC content: 48.1
Gene sequence:
>237_bases ATGAGACTCCTTAATGTTGAGATAAGCGAAGTTGAGAAGTTAACCCTGTTTGCCATCACCTGCTTTATGTGTGATGAGAA ATTTTACGTGACCACAGCTAGCACCGTCGAGGAGGCAGTAGATAAAGCGGCCGCTGTAGGTTGGCACGGTTACGAAACTA TCGATGAGGTCTGTTCAACGGCCTGCCCTAAGTGCATCGCCAATGCAAAGCAAGATGAAGCGGAGCGGTTAGTATGA
Upstream 100 bases:
>100_bases TGACCGCAGAAGACCGACGTGCCAAAGCGTGTCGCCGTCGCATTGAGGATTTCCAAATGGCACGTGAGTTAGGCGTGAGT TTGAATGAGTTGGAGGCGGT
Downstream 100 bases:
>100_bases GCAACGCAGCATTCCAGCACTTACTAAAACACTTTCGTAGCAATAAGCAGTCACTCGTTAGAGAGATCCAAACACTTATC GATAACGACGGTTTAATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MRLLNVEISEVEKLTLFAITCFMCDEKFYVTTASTVEEAVDKAAAVGWHGYETIDEVCSTACPKCIANAKQDEAERLV
Sequences:
>Translated_78_residues MRLLNVEISEVEKLTLFAITCFMCDEKFYVTTASTVEEAVDKAAAVGWHGYETIDEVCSTACPKCIANAKQDEAERLV >Mature_78_residues MRLLNVEISEVEKLTLFAITCFMCDEKFYVTTASTVEEAVDKAAAVGWHGYETIDEVCSTACPKCIANAKQDEAERLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8651; Mature: 8651
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLNVEISEVEKLTLFAITCFMCDEKFYVTTASTVEEAVDKAAAVGWHGYETIDEVCST CEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHH ACPKCIANAKQDEAERLV HCHHHHHCCCCCHHHCCC >Mature Secondary Structure MRLLNVEISEVEKLTLFAITCFMCDEKFYVTTASTVEEAVDKAAAVGWHGYETIDEVCST CEEECCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHH ACPKCIANAKQDEAERLV HCHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA