| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623244
Identifier: 167623244
GI number: 167623244
Start: 1592377
End: 1592682
Strand: Direct
Name: 167623244
Synonym: Shal_1311
Alternate gene names: NA
Gene position: 1592377-1592682 (Clockwise)
Preceding gene: 167623243
Following gene: 167623245
Centisome position: 30.46
GC content: 46.08
Gene sequence:
>306_bases ATGACTCATTCAAATAACGTGGCTCATTCAGTGCCAGCAGCCAACACCCCCGCTTTTGATCTTAGCAATCCACAGCATTT AGCCATGCGCAAATTGATGGCGGATATTCATATCCATCATGTGCAGGCATTGGCTGAGAATTTGTTAACTACTGCTGCGA AGTATCGCGGAATGGTAATCGGGCTAAAAAAGGTCGCGTTGTACGTGTTGCATGACGAGTCGCTATTTTGGTTGTGCTTT GAGTTGGAATCCGCGCTAGAAGCGTTTGAAGAACTTAATCAAATTCAAGCGAGGGCTGCAGCATGA
Upstream 100 bases:
>100_bases GCCGAAAAGCTTGACCTCGCTATCGCCAAAACACTCCGCGTTCGTTTGGTTGCCATTCGCAACAATATTCACGTTAACCA AATTCAACAGGCGGCTTGAT
Downstream 100 bases:
>100_bases GCGCATTAACTGAATCTATCAATAACCAAAACTTCAATATTCGCACTGCATTTTTAAATCGCACCTTAGGCAATGCCAGC CGTCCACCAAAAGTGACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTHSNNVAHSVPAANTPAFDLSNPQHLAMRKLMADIHIHHVQALAENLLTTAAKYRGMVIGLKKVALYVLHDESLFWLCF ELESALEAFEELNQIQARAAA
Sequences:
>Translated_101_residues MTHSNNVAHSVPAANTPAFDLSNPQHLAMRKLMADIHIHHVQALAENLLTTAAKYRGMVIGLKKVALYVLHDESLFWLCF ELESALEAFEELNQIQARAAA >Mature_100_residues THSNNVAHSVPAANTPAFDLSNPQHLAMRKLMADIHIHHVQALAENLLTTAAKYRGMVIGLKKVALYVLHDESLFWLCFE LESALEAFEELNQIQARAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11220; Mature: 11089
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSNNVAHSVPAANTPAFDLSNPQHLAMRKLMADIHIHHVQALAENLLTTAAKYRGMVI CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHE GLKKVALYVLHDESLFWLCFELESALEAFEELNQIQARAAA EHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure THSNNVAHSVPAANTPAFDLSNPQHLAMRKLMADIHIHHVQALAENLLTTAAKYRGMVI CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHE GLKKVALYVLHDESLFWLCFELESALEAFEELNQIQARAAA EHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA