Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is 167623244

Identifier: 167623244

GI number: 167623244

Start: 1592377

End: 1592682

Strand: Direct

Name: 167623244

Synonym: Shal_1311

Alternate gene names: NA

Gene position: 1592377-1592682 (Clockwise)

Preceding gene: 167623243

Following gene: 167623245

Centisome position: 30.46

GC content: 46.08

Gene sequence:

>306_bases
ATGACTCATTCAAATAACGTGGCTCATTCAGTGCCAGCAGCCAACACCCCCGCTTTTGATCTTAGCAATCCACAGCATTT
AGCCATGCGCAAATTGATGGCGGATATTCATATCCATCATGTGCAGGCATTGGCTGAGAATTTGTTAACTACTGCTGCGA
AGTATCGCGGAATGGTAATCGGGCTAAAAAAGGTCGCGTTGTACGTGTTGCATGACGAGTCGCTATTTTGGTTGTGCTTT
GAGTTGGAATCCGCGCTAGAAGCGTTTGAAGAACTTAATCAAATTCAAGCGAGGGCTGCAGCATGA

Upstream 100 bases:

>100_bases
GCCGAAAAGCTTGACCTCGCTATCGCCAAAACACTCCGCGTTCGTTTGGTTGCCATTCGCAACAATATTCACGTTAACCA
AATTCAACAGGCGGCTTGAT

Downstream 100 bases:

>100_bases
GCGCATTAACTGAATCTATCAATAACCAAAACTTCAATATTCGCACTGCATTTTTAAATCGCACCTTAGGCAATGCCAGC
CGTCCACCAAAAGTGACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MTHSNNVAHSVPAANTPAFDLSNPQHLAMRKLMADIHIHHVQALAENLLTTAAKYRGMVIGLKKVALYVLHDESLFWLCF
ELESALEAFEELNQIQARAAA

Sequences:

>Translated_101_residues
MTHSNNVAHSVPAANTPAFDLSNPQHLAMRKLMADIHIHHVQALAENLLTTAAKYRGMVIGLKKVALYVLHDESLFWLCF
ELESALEAFEELNQIQARAAA
>Mature_100_residues
THSNNVAHSVPAANTPAFDLSNPQHLAMRKLMADIHIHHVQALAENLLTTAAKYRGMVIGLKKVALYVLHDESLFWLCFE
LESALEAFEELNQIQARAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11220; Mature: 11089

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSNNVAHSVPAANTPAFDLSNPQHLAMRKLMADIHIHHVQALAENLLTTAAKYRGMVI
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHE
GLKKVALYVLHDESLFWLCFELESALEAFEELNQIQARAAA
EHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
THSNNVAHSVPAANTPAFDLSNPQHLAMRKLMADIHIHHVQALAENLLTTAAKYRGMVI
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHE
GLKKVALYVLHDESLFWLCFELESALEAFEELNQIQARAAA
EHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA