| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623240
Identifier: 167623240
GI number: 167623240
Start: 1590780
End: 1590986
Strand: Direct
Name: 167623240
Synonym: Shal_1307
Alternate gene names: NA
Gene position: 1590780-1590986 (Clockwise)
Preceding gene: 167623234
Following gene: 167623241
Centisome position: 30.43
GC content: 47.83
Gene sequence:
>207_bases ATGAGCAATCTATCACTACACATTGACGCACCTTTCTTGTCATTTGAAGAGTATGCCCGCCGCACCGGGACGACAGTTGA TAACGTCCGCTATCTCGTCCGTGAAGGACGCCTACCTATTCGCCCTAAATGCAGACCCCAAGAACGCCCATATATCAATA TGTTGGCGTTAATGAAAGAAGCCTCTGAGCTTTGCTTAGTGAGCTAA
Upstream 100 bases:
>100_bases TGCTAAATGTTTGCATATGATCAATAATCCTCGCAGATGAAGTTTAACGCTCTGTAACTCCACATTACAGAAAGACACAT AAATTCGAGGATATCATCAA
Downstream 100 bases:
>100_bases AACATTAACGTCGTCATTTGAGTGTTTTTATCTTCAATTGAAGATTAGCAAAATGGAGTTTTGCGTCTATGTATGCCAAT TCGAGCAACACACAGTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MSNLSLHIDAPFLSFEEYARRTGTTVDNVRYLVREGRLPIRPKCRPQERPYINMLALMKEASELCLVS
Sequences:
>Translated_68_residues MSNLSLHIDAPFLSFEEYARRTGTTVDNVRYLVREGRLPIRPKCRPQERPYINMLALMKEASELCLVS >Mature_67_residues SNLSLHIDAPFLSFEEYARRTGTTVDNVRYLVREGRLPIRPKCRPQERPYINMLALMKEASELCLVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7897; Mature: 7766
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLSLHIDAPFLSFEEYARRTGTTVDNVRYLVREGRLPIRPKCRPQERPYINMLALMKE CCCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH ASELCLVS HHHHCCCC >Mature Secondary Structure SNLSLHIDAPFLSFEEYARRTGTTVDNVRYLVREGRLPIRPKCRPQERPYINMLALMKE CCCEEEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH ASELCLVS HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA