Click here to switch to the map view.

The map label for this gene is 167623241

Identifier: 167623241

GI number: 167623241

Start: 1591055

End: 1591597

Strand: Direct

Name: 167623241

Synonym: Shal_1308

Alternate gene names: NA

Gene position: 1591055-1591597 (Clockwise)

Preceding gene: 167623240

Following gene: 167623242

Centisome position: 30.44

GC content: 49.72

Gene sequence:

>543_bases
ATGTATGCCAATTCGAGCAACACACAGTATTCAAATGAGCAAGCTCACCTAATCGGTGCACTGCGTCAGTTTGCAAATGA
CGAAGTAGTTAGTGATGTCGCCAAGTCTGCTGGAATGAAACGCCCACAGATGCTGCGCAATAAGTTGCTACCCGAGCAAC
CGCATCAGTTGACCGTGAGTGAGTTGGTGAAAATCACCAAGGCCAGCGGCAATCGTTGCATTGTTGATGGGGTGTTGTTG
GAGCTTAACTGCGTTACATCGGTATCGCTGGGTGACTTAGCCAATGCAAGCAAAACCACGTTAACCGATAGAGCGCTGGA
CATTAATGCCAACACCGCACAGTTAGGTGCGCTGGCTTTAGATGTTAAAGCGACTAAGCGCGTAACCGAACGGATGCGCC
ATGAAACAGTAAGGCGTGCATCTTACGTGATGGCCGAACTTGCTATTTTTGTGCATGACGTAGAGCAGAAGTTTCAAGCC
ATTCCGGTACTCACTGTTGCGAGCGATGCAATGCAAGCCATGCCCATGCCAGGGCTGATGTAG

Upstream 100 bases:

>100_bases
AAGAAGCCTCTGAGCTTTGCTTAGTGAGCTAAAACATTAACGTCGTCATTTGAGTGTTTTTATCTTCAATTGAAGATTAG
CAAAATGGAGTTTTGCGTCT

Downstream 100 bases:

>100_bases
AAGGGGAATTATATGAATGCTCTAAAGCAAACAGCGCATGAATCTGTGCCCAGAATAGAAGCCGACTTACATATTGAAAA
ATCTGCCGCTAACGATATTG

Product: regulatory CII family protein

Products: NA

Alternate protein names: Phage Regulatory CII Family Protein; Phage Protein; Phage Regulatory Protein; Regulatory Protein Cii; Phage Gene

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MYANSSNTQYSNEQAHLIGALRQFANDEVVSDVAKSAGMKRPQMLRNKLLPEQPHQLTVSELVKITKASGNRCIVDGVLL
ELNCVTSVSLGDLANASKTTLTDRALDINANTAQLGALALDVKATKRVTERMRHETVRRASYVMAELAIFVHDVEQKFQA
IPVLTVASDAMQAMPMPGLM

Sequences:

>Translated_180_residues
MYANSSNTQYSNEQAHLIGALRQFANDEVVSDVAKSAGMKRPQMLRNKLLPEQPHQLTVSELVKITKASGNRCIVDGVLL
ELNCVTSVSLGDLANASKTTLTDRALDINANTAQLGALALDVKATKRVTERMRHETVRRASYVMAELAIFVHDVEQKFQA
IPVLTVASDAMQAMPMPGLM
>Mature_180_residues
MYANSSNTQYSNEQAHLIGALRQFANDEVVSDVAKSAGMKRPQMLRNKLLPEQPHQLTVSELVKITKASGNRCIVDGVLL
ELNCVTSVSLGDLANASKTTLTDRALDINANTAQLGALALDVKATKRVTERMRHETVRRASYVMAELAIFVHDVEQKFQA
IPVLTVASDAMQAMPMPGLM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19652; Mature: 19652

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYANSSNTQYSNEQAHLIGALRQFANDEVVSDVAKSAGMKRPQMLRNKLLPEQPHQLTVS
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHH
ELVKITKASGNRCIVDGVLLELNCVTSVSLGDLANASKTTLTDRALDINANTAQLGALAL
HHHHHHHCCCCEEEEEHEEEEEHHHHCCCHHHCCCCCHHECCCCEEECCCCHHHHHHHEE
DVKATKRVTERMRHETVRRASYVMAELAIFVHDVEQKFQAIPVLTVASDAMQAMPMPGLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MYANSSNTQYSNEQAHLIGALRQFANDEVVSDVAKSAGMKRPQMLRNKLLPEQPHQLTVS
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCHH
ELVKITKASGNRCIVDGVLLELNCVTSVSLGDLANASKTTLTDRALDINANTAQLGALAL
HHHHHHHCCCCEEEEEHEEEEEHHHHCCCHHHCCCCCHHECCCCEEECCCCHHHHHHHEE
DVKATKRVTERMRHETVRRASYVMAELAIFVHDVEQKFQAIPVLTVASDAMQAMPMPGLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA