Click here to switch to the map view.

The map label for this gene is yjcS [H]

Identifier: 167623199

GI number: 167623199

Start: 1540123

End: 1542135

Strand: Direct

Name: yjcS [H]

Synonym: Shal_1265

Alternate gene names: 167623199

Gene position: 1540123-1542135 (Clockwise)

Preceding gene: 167623198

Following gene: 167623203

Centisome position: 29.47

GC content: 47.74

Gene sequence:

>2013_bases
ATGCTAACAATAACGATAAAACAGGCTTTGCAACCCTATCTGCTTGCGGGATTAACGACGCTTTTACTGGTTGGCTGCCA
ACCAGAATTTAAGGCGTCAGCTAATTATGATGACAAGCCTGATAGCGCAGGTTTCACTGCCGCGAGCTCCCACACCATAG
AAGCTAATCAACGGCTATTATCTCTGCTTCCTTTCGATAATGTTGAGGACTTTGACGATGCTAATCGCGGCTTTATCGCG
AGAATGCCAGATCTAAGTGTGTTCGATGCGAGCGGCAGCATTGTCTGGGATAGAAGCGCTTATGATTTTATTGAGGGAGA
AGCGCCGGCCAGTGTTAACCCAAGCCTTTGGCGCCAAGCGAGCCTTAATAATATTGACGGCTTATTTGAAGTGACAAAGG
ACGTCTATCAACTGCGAGGCTTTGATTTAGCCAATATGACGGTGATAGAGGGAGAGAAGGGCTGGATTATTGTCGACCCG
TTAACCACAGCAGAAACGGCAAAAGTCGCCTTTGATTTTCTCAATAAGAGATTAAGGAAAAGGCCGATTTCTGCGATTAT
ATTCACCCACAGTCATATGGACCACTTTGGCGGCGCACTCGGTTTGTTGGCTGAGGGAGAGGCCTTTACTGAGGAAGTCG
ATATCATCGCCCCAGCAGGCTTTATGCATGAGGCGACCAGCGAGAATGTCATTGCAGGTACCGCCATGAGTCGCCGCGCC
ATGTATATGTATGGTAAGCAGCTACCGCGTTCGGAGCGGGGGCATATCGATTCTGGCCTAGGTAAAGAACCTGCATTTGG
CCAATTTGGGATCTTGAATCCTAACTTAATAGTAGAGCAAGATGCCTCTATGACGATAGATGGCGTACCGTTCGAGTTCC
ATATTGTTTCAGGCTCAGAAGCGCCAGCAGAATTTACTTTCTATCTGCCTGAGCAGCAAGCTTATTGCGGCGCCGAGTTA
GTCTCGAAGAATATGCATAATCTCTATACCTTGCGAGGCGCTAAGGTGAGAGATGCCTTAACTTTGAGTCGGGCTATTGA
TGAGGCGCTAATGGCCCAGCGAGATACCAAGGTGTATTTTGGTAGCCACCATTGGCCCATTTGGGGCCAAGAGAGAGTCA
ATGAGTTCTTGGAGAAGCAGCGTGATACTTATAAATATATCCACGATCAAGCTGTACGTATGCTCAATGCAGGACTGACG
CCGGAAGAGATTGCCGAGCAGATCCAGATGCCACCTGCGCTATCTAACACATTTGTATCGCGCGGCTATTACGGCACGGC
CAAGCACAATGCCAAGGCAGTGTATCAAGCCTATCTAGGTTGGTATGACGCCAACCCAGTTAACTTAGATCCGCTGCCAG
CGACCAAAACCGCCATTAAGTATGTTGAACTGATGGGGGGAGCAGATAAGGTTATGGCGGCAACGCAAGTGGCCGTGGAC
TCTGGAGAGTACCGTTGGGCCGCAGAGCTGATTAATCATCTGGTGGTTAGTGACGATGATAACGATAGGGCAAAAGCCTT
GTTGGCGCTGGTTTATGATCAGTTAGGCTATCAAGCAGAATCGGCACCGTGGCGAGATGTATATCTAACTGCTGCCTATG
AGCTGCGACATGGCAGCCCTGAAAAGGGGATTGAACTGGCCTCGATGAAGCAGATTTTACTGCAATCTCCTCTCGATAAC
TTTATGCAGTCGATGGCAACGAGGGTGATCGGTCCAGAGGTTTTTGGTGAGGAGTTTGTGTTTAATATTAACTTTATCGA
TCTCGATAAAAACTACCTGTTAAGCCTTAAAAATGCCGTGTTACATCACAAGCTTGCGCCTAAGTCCGCGAGTGCTAACG
CAACACTTAACATCAGCCATGAGCTGTTTGTCGACCTAATCATAGGCAACGCTGGCGTAAAAGAGGTGCTATTTTCAGAT
GAGTTAACCATCGAGGGCAGTAAGCTTGATTTAGTCAGCTTTTTCTCATCGTTAGATAAACCCAAAGGTGTGTTTAATAT
TGTGACTCCTTAG

Upstream 100 bases:

>100_bases
TTGCCTAAGGTTTCGGATGATAGTTGGCGAAAAATGATAACCACAATGTTGCGTTAATGTAATAGCTTGTCCGTATGGAT
TAACCATCGGATCAGGTCAT

Downstream 100 bases:

>100_bases
CAAGAGCTTAGCGAGTAATGAGTCAGTTCACATGTCGCTACTTCTGTGGGACGCTATAAAGCCATCCATGGCCGCTCTGC
GGTTTCATCCCTGAAACCGA

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MLTITIKQALQPYLLAGLTTLLLVGCQPEFKASANYDDKPDSAGFTAASSHTIEANQRLLSLLPFDNVEDFDDANRGFIA
RMPDLSVFDASGSIVWDRSAYDFIEGEAPASVNPSLWRQASLNNIDGLFEVTKDVYQLRGFDLANMTVIEGEKGWIIVDP
LTTAETAKVAFDFLNKRLRKRPISAIIFTHSHMDHFGGALGLLAEGEAFTEEVDIIAPAGFMHEATSENVIAGTAMSRRA
MYMYGKQLPRSERGHIDSGLGKEPAFGQFGILNPNLIVEQDASMTIDGVPFEFHIVSGSEAPAEFTFYLPEQQAYCGAEL
VSKNMHNLYTLRGAKVRDALTLSRAIDEALMAQRDTKVYFGSHHWPIWGQERVNEFLEKQRDTYKYIHDQAVRMLNAGLT
PEEIAEQIQMPPALSNTFVSRGYYGTAKHNAKAVYQAYLGWYDANPVNLDPLPATKTAIKYVELMGGADKVMAATQVAVD
SGEYRWAAELINHLVVSDDDNDRAKALLALVYDQLGYQAESAPWRDVYLTAAYELRHGSPEKGIELASMKQILLQSPLDN
FMQSMATRVIGPEVFGEEFVFNINFIDLDKNYLLSLKNAVLHHKLAPKSASANATLNISHELFVDLIIGNAGVKEVLFSD
ELTIEGSKLDLVSFFSSLDKPKGVFNIVTP

Sequences:

>Translated_670_residues
MLTITIKQALQPYLLAGLTTLLLVGCQPEFKASANYDDKPDSAGFTAASSHTIEANQRLLSLLPFDNVEDFDDANRGFIA
RMPDLSVFDASGSIVWDRSAYDFIEGEAPASVNPSLWRQASLNNIDGLFEVTKDVYQLRGFDLANMTVIEGEKGWIIVDP
LTTAETAKVAFDFLNKRLRKRPISAIIFTHSHMDHFGGALGLLAEGEAFTEEVDIIAPAGFMHEATSENVIAGTAMSRRA
MYMYGKQLPRSERGHIDSGLGKEPAFGQFGILNPNLIVEQDASMTIDGVPFEFHIVSGSEAPAEFTFYLPEQQAYCGAEL
VSKNMHNLYTLRGAKVRDALTLSRAIDEALMAQRDTKVYFGSHHWPIWGQERVNEFLEKQRDTYKYIHDQAVRMLNAGLT
PEEIAEQIQMPPALSNTFVSRGYYGTAKHNAKAVYQAYLGWYDANPVNLDPLPATKTAIKYVELMGGADKVMAATQVAVD
SGEYRWAAELINHLVVSDDDNDRAKALLALVYDQLGYQAESAPWRDVYLTAAYELRHGSPEKGIELASMKQILLQSPLDN
FMQSMATRVIGPEVFGEEFVFNINFIDLDKNYLLSLKNAVLHHKLAPKSASANATLNISHELFVDLIIGNAGVKEVLFSD
ELTIEGSKLDLVSFFSSLDKPKGVFNIVTP
>Mature_670_residues
MLTITIKQALQPYLLAGLTTLLLVGCQPEFKASANYDDKPDSAGFTAASSHTIEANQRLLSLLPFDNVEDFDDANRGFIA
RMPDLSVFDASGSIVWDRSAYDFIEGEAPASVNPSLWRQASLNNIDGLFEVTKDVYQLRGFDLANMTVIEGEKGWIIVDP
LTTAETAKVAFDFLNKRLRKRPISAIIFTHSHMDHFGGALGLLAEGEAFTEEVDIIAPAGFMHEATSENVIAGTAMSRRA
MYMYGKQLPRSERGHIDSGLGKEPAFGQFGILNPNLIVEQDASMTIDGVPFEFHIVSGSEAPAEFTFYLPEQQAYCGAEL
VSKNMHNLYTLRGAKVRDALTLSRAIDEALMAQRDTKVYFGSHHWPIWGQERVNEFLEKQRDTYKYIHDQAVRMLNAGLT
PEEIAEQIQMPPALSNTFVSRGYYGTAKHNAKAVYQAYLGWYDANPVNLDPLPATKTAIKYVELMGGADKVMAATQVAVD
SGEYRWAAELINHLVVSDDDNDRAKALLALVYDQLGYQAESAPWRDVYLTAAYELRHGSPEKGIELASMKQILLQSPLDN
FMQSMATRVIGPEVFGEEFVFNINFIDLDKNYLLSLKNAVLHHKLAPKSASANATLNISHELFVDLIIGNAGVKEVLFSD
ELTIEGSKLDLVSFFSSLDKPKGVFNIVTP

Specific function: Unknown

COG id: COG2015

COG function: function code Q; Alkyl sulfatase and related hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082368, Length=628, Percent_Identity=42.1974522292994, Blast_Score=503, Evalue=1e-143,
Organism=Saccharomyces cerevisiae, GI6324409, Length=622, Percent_Identity=42.443729903537, Blast_Score=528, Evalue=1e-150,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR003033 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 74211; Mature: 74211

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTITIKQALQPYLLAGLTTLLLVGCQPEFKASANYDDKPDSAGFTAASSHTIEANQRLL
CEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHH
SLLPFDNVEDFDDANRGFIARMPDLSVFDASGSIVWDRSAYDFIEGEAPASVNPSLWRQA
HHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCEEECCCCHHHHCCCCCCCCCHHHHHHC
SLNNIDGLFEVTKDVYQLRGFDLANMTVIEGEKGWIIVDPLTTAETAKVAFDFLNKRLRK
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHH
RPISAIIFTHSHMDHFGGALGLLAEGEAFTEEVDIIAPAGFMHEATSENVIAGTAMSRRA
CCCEEEEEECCCHHHHCCHHHEEECCCHHHCCCCEEECCCHHHHCCCCCEEEECHHHHHH
MYMYGKQLPRSERGHIDSGLGKEPAFGQFGILNPNLIVEQDASMTIDGVPFEFHIVSGSE
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCEEEEEECCCC
APAEFTFYLPEQQAYCGAELVSKNMHNLYTLRGAKVRDALTLSRAIDEALMAQRDTKVYF
CCCEEEEECCCCHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEE
GSHHWPIWGQERVNEFLEKQRDTYKYIHDQAVRMLNAGLTPEEIAEQIQMPPALSNTFVS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH
RGYYGTAKHNAKAVYQAYLGWYDANPVNLDPLPATKTAIKYVELMGGADKVMAATQVAVD
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEC
SGEYRWAAELINHLVVSDDDNDRAKALLALVYDQLGYQAESAPWRDVYLTAAYELRHGSP
CCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCC
EKGIELASMKQILLQSPLDNFMQSMATRVIGPEVFGEEFVFNINFIDLDKNYLLSLKNAV
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHCCCEEEEEEEEEECCHHHHHHHHHHH
LHHKLAPKSASANATLNISHELFVDLIIGNAGVKEVLFSDELTIEGSKLDLVSFFSSLDK
HHHHCCCCCCCCCEEEEECHHEEEEEEECCCCHHHHHCCCCEEEECCCHHHHHHHHHCCC
PKGVFNIVTP
CCCCEEECCC
>Mature Secondary Structure
MLTITIKQALQPYLLAGLTTLLLVGCQPEFKASANYDDKPDSAGFTAASSHTIEANQRLL
CEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHH
SLLPFDNVEDFDDANRGFIARMPDLSVFDASGSIVWDRSAYDFIEGEAPASVNPSLWRQA
HHCCCCCCCCCCCCCCCEEEECCCCEEEECCCCEEECCCCHHHHCCCCCCCCCHHHHHHC
SLNNIDGLFEVTKDVYQLRGFDLANMTVIEGEKGWIIVDPLTTAETAKVAFDFLNKRLRK
CCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHH
RPISAIIFTHSHMDHFGGALGLLAEGEAFTEEVDIIAPAGFMHEATSENVIAGTAMSRRA
CCCEEEEEECCCHHHHCCHHHEEECCCHHHCCCCEEECCCHHHHCCCCCEEEECHHHHHH
MYMYGKQLPRSERGHIDSGLGKEPAFGQFGILNPNLIVEQDASMTIDGVPFEFHIVSGSE
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCEEEEEECCCC
APAEFTFYLPEQQAYCGAELVSKNMHNLYTLRGAKVRDALTLSRAIDEALMAQRDTKVYF
CCCEEEEECCCCHHHHHHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEE
GSHHWPIWGQERVNEFLEKQRDTYKYIHDQAVRMLNAGLTPEEIAEQIQMPPALSNTFVS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHH
RGYYGTAKHNAKAVYQAYLGWYDANPVNLDPLPATKTAIKYVELMGGADKVMAATQVAVD
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHEEC
SGEYRWAAELINHLVVSDDDNDRAKALLALVYDQLGYQAESAPWRDVYLTAAYELRHGSP
CCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCCC
EKGIELASMKQILLQSPLDNFMQSMATRVIGPEVFGEEFVFNINFIDLDKNYLLSLKNAV
CCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHCCCEEEEEEEEEECCHHHHHHHHHHH
LHHKLAPKSASANATLNISHELFVDLIIGNAGVKEVLFSDELTIEGSKLDLVSFFSSLDK
HHHHCCCCCCCCCEEEEECHHEEEEEEECCCCHHHHHCCCCEEEECCCHHHHHHHHHCCC
PKGVFNIVTP
CCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]