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The map label for this gene is oruR [H]

Identifier: 167623198

GI number: 167623198

Start: 1538890

End: 1539951

Strand: Direct

Name: oruR [H]

Synonym: Shal_1264

Alternate gene names: 167623198

Gene position: 1538890-1539951 (Clockwise)

Preceding gene: 167623197

Following gene: 167623199

Centisome position: 29.44

GC content: 47.27

Gene sequence:

>1062_bases
TTGAGCTCGGCTAACATAAATCCTGCTAGCTTAGACCCTGCTAACTTAGGATCTGGTAACTACACCACAATTGCGGCTTG
GTCTCTGGCGATTGCTAGAGCATTAAGTGTTAGCAATATCGAGCCTAAGGCGCTATTTCATCGAGTCGGGTTAGATCTTG
ATGCATTGGAAGCGCAGCCCTACGAGCGAGTCGAAATAGATAAAATGACTCGGCTCTGGCGAGCGGCTGAGCAGGCGTCA
ACATCGGATGCCTTTGGTCTAACCGTTGGCCAATATGCGTTCCCCATGCATTTTCACTCTTTGGGGAAACTTATGATGAG
TACTGACTCATTAGCGCAAGCCTTCGAAGCACTCCCCGATTATTCCGCACTGGTGAGTAACAGTGGCCAGATCCGCTTGC
AACGTACACCACAGTGGCTTGGGTTTACCATTAGTCCTCTAAAAGGGGTAGAGATTAGCGAGTTAGCTATCGATGCGTTT
TTTAGCAGCTTGATGCAGCAGGGTAAGCAGATGGTAGGTCATCGTCACTTTGTGCGCAGAGTTGAATTAATGCGTAGTGC
GCCTAAATCAAATCAAGCATGGCAAGACTGTTTCGGTTGCCCTGTGGTGATGAATGCCACTGATAATTGTATGTGGATGG
ACAGAAGTATTCTGGAGCAGACGGCGCTGACCAAGGACTCTCAATTGGCTGAGTCTAATGAACTGGCTGTACGTCAATAT
CTGCATGATATGCAGGCATTGAGTTGGCGACAGAAAATTAGCCAAGGGATCCATGCTACCTTGCTTAACCAAGAGCCTAC
GGCGGCGAAAATCGCCCAGATGTACAATATTAGCGAACGTAGTTTAGGTCGCTACCTACAACTTGAAGGAACAGGTTTTA
GAGAGTTACTTAAACTTAAGCGCCAAGAGTTAGCGCTGCATTATCTCATTAACACCGATATGCCCATTAGCTTACTGTCC
GACACTTTAGGCTATAGTAACGTGAGTAATTTCACCCGCTCTTTCCGATCTTGGCAGGGAAGCAGTCCTTCACTGTACCG
TGAAAAGCATCGTGAACAGTAA

Upstream 100 bases:

>100_bases
GTTTGATAAGCAAGGGCGTATCAGTCATATTCGTCGTCATGGTGAGACGCTGTGATTTTGGTTTATTTACCCGTTACTTA
TTTCATGGCAAGGCGCTAAC

Downstream 100 bases:

>100_bases
ACTCGCAAAGAGCCCAAGAGTTCAGCTAAGTTTTCGCTCTATTGCCTATTGCTTAATTCAGCTATTGAGATTTGCCTAAG
GTTTCGGATGATAGTTGGCG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MSSANINPASLDPANLGSGNYTTIAAWSLAIARALSVSNIEPKALFHRVGLDLDALEAQPYERVEIDKMTRLWRAAEQAS
TSDAFGLTVGQYAFPMHFHSLGKLMMSTDSLAQAFEALPDYSALVSNSGQIRLQRTPQWLGFTISPLKGVEISELAIDAF
FSSLMQQGKQMVGHRHFVRRVELMRSAPKSNQAWQDCFGCPVVMNATDNCMWMDRSILEQTALTKDSQLAESNELAVRQY
LHDMQALSWRQKISQGIHATLLNQEPTAAKIAQMYNISERSLGRYLQLEGTGFRELLKLKRQELALHYLINTDMPISLLS
DTLGYSNVSNFTRSFRSWQGSSPSLYREKHREQ

Sequences:

>Translated_353_residues
MSSANINPASLDPANLGSGNYTTIAAWSLAIARALSVSNIEPKALFHRVGLDLDALEAQPYERVEIDKMTRLWRAAEQAS
TSDAFGLTVGQYAFPMHFHSLGKLMMSTDSLAQAFEALPDYSALVSNSGQIRLQRTPQWLGFTISPLKGVEISELAIDAF
FSSLMQQGKQMVGHRHFVRRVELMRSAPKSNQAWQDCFGCPVVMNATDNCMWMDRSILEQTALTKDSQLAESNELAVRQY
LHDMQALSWRQKISQGIHATLLNQEPTAAKIAQMYNISERSLGRYLQLEGTGFRELLKLKRQELALHYLINTDMPISLLS
DTLGYSNVSNFTRSFRSWQGSSPSLYREKHREQ
>Mature_352_residues
SSANINPASLDPANLGSGNYTTIAAWSLAIARALSVSNIEPKALFHRVGLDLDALEAQPYERVEIDKMTRLWRAAEQAST
SDAFGLTVGQYAFPMHFHSLGKLMMSTDSLAQAFEALPDYSALVSNSGQIRLQRTPQWLGFTISPLKGVEISELAIDAFF
SSLMQQGKQMVGHRHFVRRVELMRSAPKSNQAWQDCFGCPVVMNATDNCMWMDRSILEQTALTKDSQLAESNELAVRQYL
HDMQALSWRQKISQGIHATLLNQEPTAAKIAQMYNISERSLGRYLQLEGTGFRELLKLKRQELALHYLINTDMPISLLSD
TLGYSNVSNFTRSFRSWQGSSPSLYREKHREQ

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39687; Mature: 39555

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSANINPASLDPANLGSGNYTTIAAWSLAIARALSVSNIEPKALFHRVGLDLDALEAQP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCC
YERVEIDKMTRLWRAAEQASTSDAFGLTVGQYAFPMHFHSLGKLMMSTDSLAQAFEALPD
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YSALVSNSGQIRLQRTPQWLGFTISPLKGVEISELAIDAFFSSLMQQGKQMVGHRHFVRR
HHHHHCCCCCEEEEECCCHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VELMRSAPKSNQAWQDCFGCPVVMNATDNCMWMDRSILEQTALTKDSQLAESNELAVRQY
HHHHHCCCCCCCHHHHHCCCCEEECCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LHDMQALSWRQKISQGIHATLLNQEPTAAKIAQMYNISERSLGRYLQLEGTGFRELLKLK
HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCHHHCCCEEEECCCCHHHHHHHH
RQELALHYLINTDMPISLLSDTLGYSNVSNFTRSFRSWQGSSPSLYREKHREQ
HHHHHHHHEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
SSANINPASLDPANLGSGNYTTIAAWSLAIARALSVSNIEPKALFHRVGLDLDALEAQP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCC
YERVEIDKMTRLWRAAEQASTSDAFGLTVGQYAFPMHFHSLGKLMMSTDSLAQAFEALPD
CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
YSALVSNSGQIRLQRTPQWLGFTISPLKGVEISELAIDAFFSSLMQQGKQMVGHRHFVRR
HHHHHCCCCCEEEEECCCHHCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VELMRSAPKSNQAWQDCFGCPVVMNATDNCMWMDRSILEQTALTKDSQLAESNELAVRQY
HHHHHCCCCCCCHHHHHCCCCEEECCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LHDMQALSWRQKISQGIHATLLNQEPTAAKIAQMYNISERSLGRYLQLEGTGFRELLKLK
HHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCCHHHCCCEEEECCCCHHHHHHHH
RQELALHYLINTDMPISLLSDTLGYSNVSNFTRSFRSWQGSSPSLYREKHREQ
HHHHHHHHEECCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]