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The map label for this gene is recN [H]

Identifier: 167623146

GI number: 167623146

Start: 1470897

End: 1472558

Strand: Reverse

Name: recN [H]

Synonym: Shal_1212

Alternate gene names: 167623146

Gene position: 1472558-1470897 (Counterclockwise)

Preceding gene: 167623147

Following gene: 167623136

Centisome position: 28.17

GC content: 48.68

Gene sequence:

>1662_bases
ATGCTTTGCCAACTCAGCATCAACAACTTTGCTATTGTGCGTTTCTTAGAGCTCGACTTTAAAGCTGGAATGACCAGTAT
TACGGGTGAAACCGGCGCGGGTAAATCGATTGCTATCGATGCTCTCGGCCTATGTTTAGGTAATCGAGCCGACGCCAATA
CCATTAGACCTGGTGCCACTAAGGCCGAAGTAAGTGCCCGCTTTTTATTAGATGATACTCCAGCAGCAAAACGCTGGCTT
GAAGATAACGACCTTGAACTCGATGACGAGTGCATCTTGCGCCGCACAATTAGCAGTGATGGCCGCTCACGCGCCTACAT
CAACGGTAATCCCGTGCCGCTAACGCAAATCAAATCCCTTGGGCAGCGGCTTATCGGTATTCATAGCCAACATGCTCACC
ACGCTATGCTAAAGAGTGAGCATCAACTCACCCTGCTAGATAGCTATGCCAACCATAAGATGCTGCTCGACAGCGTCAGC
GCTAGCTACCACAGATGTAAGACTATCGAGAAACAACTGCATCTATTAGAGATGTCCCAGCAGGAGCGTTTAGCGCGCAA
ACAGCTACTGCAATATCAGGTTGAGGAGTTAAACGAATTCGCTATTAATGAAGGCGAATTCGAGTCTATTGAGGCTGAAC
ATAAGAAACTGGCTAACAGCACTGCTTTAATCGAGCTTTGCCGTAACCAACTGCATATTTTACAAGAGAGTGATGAGGGT
AATGTTGAGTCGCTATTAAATACCTCGATCAGTCAGGGGCAAGATCTTGAAAGCTACGACCCTGAACTCGGCGGTGTCCT
AGCCATGCTTAACGATGCGCTTATTCAGGTACAAGAAAGTAGTAGTGAGATAGAGCGTTACTTAGATGGCTTAGAGCTAG
ACCCTGAATATTTTGCTCATTTAGAGCTGCGCCTTTCTAAGACGATGCAGCTTGCCCGCAAGCATCAAGTGATGCCAAAT
GAGCTCTATACTCATCACCAGAGTTTGCTAGAGGAGCTTGAAGACTTAGGTTCTGACGACGACAAGTTAGATGATATTAG
TGAACAGTTAAAGGCGAGCCAAGAGGCTTATCTGCAACACGCTAGAAAGCTCAGCCAAAGCCGCAGTCGTTATGCTAAAG
AGCTTGATAAACAGGTGACCCACTCCATCCACGAGCTCAACATGCCTAAGGGTAAGTTTACCATTGCGGTTAACTTCAAT
GAGGCGGTTATCACCCCAAGTGGCTGTGACAGCATTGAGTTTTTAGTCTCGACCAACCCAGGTCAGCCTCTGCAGCCTAT
TGCAAAGGTCGCCTCCGGTGGCGAGTTGTCGCGTATTGGTTTAGGCATTCAGGTGATCACCGCCAAAAAGGTCTCGACGC
CGACACTGATCTTCGATGAAGTGGATGTGGGTATTTCAGGGCCTACCGCGGCCGTTGTTGGCCGTATGCTGCGCTCACTT
GGTGAGTCGACTCAGGTGTTTTGTGTGACCCACCTGCCGCAGGTGGCGGGTAATGGCCATCAGCATATGTTCGTCAATAA
GAGCAGCAAAGCAGGTCAGACTGAGACCTCTATGGTGGCACTGGACAAAGCTCAACGCATCGAAGAGTTAGCGCGCTTAT
TAGGTGGCGATACCATCACCAGTAATACCTTGGCGAATGCGAAAGAACTGCTGCTCAGTTAA

Upstream 100 bases:

>100_bases
ACATGTGATTAATATCGAGTGATCATACAACAGTTGTTTACTGTATAGATAAACAGTATATACTGTTTAACTATACAGTG
TTTTGATAAAGGACATCACT

Downstream 100 bases:

>100_bases
TCCCTTTTATACCGGACTAAAAACAAAAATGCAGAGCCTTCGCTCTGCATTTTTTATGACTCGATATTTTAAGCGATTAA
GCATCAAGCGAGGTAATAGG

Product: recombination and repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLCQLSINNFAIVRFLELDFKAGMTSITGETGAGKSIAIDALGLCLGNRADANTIRPGATKAEVSARFLLDDTPAAKRWL
EDNDLELDDECILRRTISSDGRSRAYINGNPVPLTQIKSLGQRLIGIHSQHAHHAMLKSEHQLTLLDSYANHKMLLDSVS
ASYHRCKTIEKQLHLLEMSQQERLARKQLLQYQVEELNEFAINEGEFESIEAEHKKLANSTALIELCRNQLHILQESDEG
NVESLLNTSISQGQDLESYDPELGGVLAMLNDALIQVQESSSEIERYLDGLELDPEYFAHLELRLSKTMQLARKHQVMPN
ELYTHHQSLLEELEDLGSDDDKLDDISEQLKASQEAYLQHARKLSQSRSRYAKELDKQVTHSIHELNMPKGKFTIAVNFN
EAVITPSGCDSIEFLVSTNPGQPLQPIAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVFCVTHLPQVAGNGHQHMFVNKSSKAGQTETSMVALDKAQRIEELARLLGGDTITSNTLANAKELLLS

Sequences:

>Translated_553_residues
MLCQLSINNFAIVRFLELDFKAGMTSITGETGAGKSIAIDALGLCLGNRADANTIRPGATKAEVSARFLLDDTPAAKRWL
EDNDLELDDECILRRTISSDGRSRAYINGNPVPLTQIKSLGQRLIGIHSQHAHHAMLKSEHQLTLLDSYANHKMLLDSVS
ASYHRCKTIEKQLHLLEMSQQERLARKQLLQYQVEELNEFAINEGEFESIEAEHKKLANSTALIELCRNQLHILQESDEG
NVESLLNTSISQGQDLESYDPELGGVLAMLNDALIQVQESSSEIERYLDGLELDPEYFAHLELRLSKTMQLARKHQVMPN
ELYTHHQSLLEELEDLGSDDDKLDDISEQLKASQEAYLQHARKLSQSRSRYAKELDKQVTHSIHELNMPKGKFTIAVNFN
EAVITPSGCDSIEFLVSTNPGQPLQPIAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVFCVTHLPQVAGNGHQHMFVNKSSKAGQTETSMVALDKAQRIEELARLLGGDTITSNTLANAKELLLS
>Mature_553_residues
MLCQLSINNFAIVRFLELDFKAGMTSITGETGAGKSIAIDALGLCLGNRADANTIRPGATKAEVSARFLLDDTPAAKRWL
EDNDLELDDECILRRTISSDGRSRAYINGNPVPLTQIKSLGQRLIGIHSQHAHHAMLKSEHQLTLLDSYANHKMLLDSVS
ASYHRCKTIEKQLHLLEMSQQERLARKQLLQYQVEELNEFAINEGEFESIEAEHKKLANSTALIELCRNQLHILQESDEG
NVESLLNTSISQGQDLESYDPELGGVLAMLNDALIQVQESSSEIERYLDGLELDPEYFAHLELRLSKTMQLARKHQVMPN
ELYTHHQSLLEELEDLGSDDDKLDDISEQLKASQEAYLQHARKLSQSRSRYAKELDKQVTHSIHELNMPKGKFTIAVNFN
EAVITPSGCDSIEFLVSTNPGQPLQPIAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVFCVTHLPQVAGNGHQHMFVNKSSKAGQTETSMVALDKAQRIEELARLLGGDTITSNTLANAKELLLS

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=551, Percent_Identity=56.8058076225045, Blast_Score=610, Evalue=1e-176,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61106; Mature: 61106

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCQLSINNFAIVRFLELDFKAGMTSITGETGAGKSIAIDALGLCLGNRADANTIRPGAT
CEEEEECCCEEEEEEEEHHHHCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC
KAEVSARFLLDDTPAAKRWLEDNDLELDDECILRRTISSDGRSRAYINGNPVPLTQIKSL
HHHHHEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
GQRLIGIHSQHAHHAMLKSEHQLTLLDSYANHKMLLDSVSASYHRCKTIEKQLHLLEMSQ
HHHHHHCCCCHHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERLARKQLLQYQVEELNEFAINEGEFESIEAEHKKLANSTALIELCRNQLHILQESDEG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NVESLLNTSISQGQDLESYDPELGGVLAMLNDALIQVQESSSEIERYLDGLELDPEYFAH
CHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LELRLSKTMQLARKHQVMPNELYTHHQSLLEELEDLGSDDDKLDDISEQLKASQEAYLQH
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ARKLSQSRSRYAKELDKQVTHSIHELNMPKGKFTIAVNFNEAVITPSGCDSIEFLVSTNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCEEEEEECCC
GQPLQPIAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRSL
CCCHHHHHHHHCCCCEEEECCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHC
GESTQVFCVTHLPQVAGNGHQHMFVNKSSKAGQTETSMVALDKAQRIEELARLLGGDTIT
CCCCEEEEEECCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SNTLANAKELLLS
CCHHHHHHHHHCC
>Mature Secondary Structure
MLCQLSINNFAIVRFLELDFKAGMTSITGETGAGKSIAIDALGLCLGNRADANTIRPGAT
CEEEEECCCEEEEEEEEHHHHCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC
KAEVSARFLLDDTPAAKRWLEDNDLELDDECILRRTISSDGRSRAYINGNPVPLTQIKSL
HHHHHEEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
GQRLIGIHSQHAHHAMLKSEHQLTLLDSYANHKMLLDSVSASYHRCKTIEKQLHLLEMSQ
HHHHHHCCCCHHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QERLARKQLLQYQVEELNEFAINEGEFESIEAEHKKLANSTALIELCRNQLHILQESDEG
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NVESLLNTSISQGQDLESYDPELGGVLAMLNDALIQVQESSSEIERYLDGLELDPEYFAH
CHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LELRLSKTMQLARKHQVMPNELYTHHQSLLEELEDLGSDDDKLDDISEQLKASQEAYLQH
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ARKLSQSRSRYAKELDKQVTHSIHELNMPKGKFTIAVNFNEAVITPSGCDSIEFLVSTNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCEEEEEECCC
GQPLQPIAKVASGGELSRIGLGIQVITAKKVSTPTLIFDEVDVGISGPTAAVVGRMLRSL
CCCHHHHHHHHCCCCEEEECCCEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHC
GESTQVFCVTHLPQVAGNGHQHMFVNKSSKAGQTETSMVALDKAQRIEELARLLGGDTIT
CCCCEEEEEECCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
SNTLANAKELLLS
CCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA