Click here to switch to the map view.

The map label for this gene is yjjK [C]

Identifier: 167623136

GI number: 167623136

Start: 1461214

End: 1462881

Strand: Reverse

Name: yjjK [C]

Synonym: Shal_1202

Alternate gene names: 167623136

Gene position: 1462881-1461214 (Counterclockwise)

Preceding gene: 167623146

Following gene: 167623135

Centisome position: 27.99

GC content: 48.32

Gene sequence:

>1668_bases
ATGGCTCAATTTGTATATAGCATGCTTAGAGTGGGCAAGATTGTTCCGCCTAAAAAACAGATCCTAAAAAATATCTCGTT
AAGCTTTTTCCCTGGCGCTAAAATTGGTGTTTTGGGTCTAAACGGTTCGGGTAAATCGACCCTGCTTCGCATCATGGCGG
GTCTTGATACCGAAATTGAGGGTGAAGCGCGCCCAATGCAAGATCTCAAAATCGGATACTTGCCGCAGGAACCTAAACTC
GATCCAAACCAAACCGTGCGTGAAGCGGTAGAAGAGGCAGTTGCTGAAGCTAAAAATGCTTTAGTGCGTTTAGATGAAGT
TTACGCACTTTACGCCGAGCCAGATGCCGACTTTGACGCCCTTGCTAAAGAGCAGGGTCAGCTAGAAGCAATTATTCAAT
CGCAAGATGCCCACAACCTAGAGATGGTATTAGATAGAGCGGCCAACGCCCTACGTCTTCCAGATTGGGATGAGAAAATC
GAAGTCTTGTCGGGTGGTGAGCGTCGCCGTGTAGCTATTTGTCGCTTGCTGCTTGAAAAGCCTGACATGCTATTACTCGA
CGAGCCAACCAACCACTTAGATGCCGAATCCGTTGCTTGGTTAGAGCGCTTCTTACAAGACTATAGTGGCACCGTAGTGG
CAATTACCCACGATAGATACTTCCTCGATAACGCCGCAGGCTGGATCTTAGAGCTTGACCGTGGTGAAGGTATTCCATGG
GAAGGTAACTACTCTTCATGGCTTGAGCAAAAAGATGCTCGTCTACAACAAGAATCATCCACTGAAAGCGCTCGCCAAAA
GACGATTGCTAAAGAATTGGAATGGGTTCGTCAAGGAGCCAAGGGCCGTCAGTCTAAAGGTAAGGCGCGTATGGCTCGCT
TTGAAGAGCTTAATACTAACGACTACCAGAAACGTAACGAGACTAACGAGCTATTCATTCCGCCAGGACCACGTTTAGGC
GATAAGGTTATTGAAATTAATAACCTAACTAAGTCTTATGGTGACCGCGTACTTATCGACGACTTGACTTTCTCTGTGCC
TAAGGGCGCTATCGTCGGTATTATCGGTGCTAACGGTGCGGGTAAATCGACTCTATTTAAGATGATCTCTGGCGCAGAGC
AGCCAGATAGCGGCACGGTTGAGCTAGGTGAATCGGTACAAATTGCCTCGGTAGAGCAGTTCCGTGATTCGATGAACGAC
AAGAACACCGTTTGGCAAGAGATCTCTGACGGCCAAGACATCATGCGCATCAACAACACCGAAATTCCAAGCCGTGCCTA
TGTTGGCCGCTTTAACTTCCGTGGTGGCGATCAGCAAAAGATCATCGGCACCCTCTCTGGTGGTGAGCGTAACCGTGTGC
ATTTAGCGAAGCTACTGCAAGCGGGCGGCAACGTACTGCTACTCGATGAACCCACCAACGACTTGGACGTTGAAACATTG
CGTGCACTAGAAGAAGCGCTACTTGAGTTCCCTGGTTGTGCCATGGTGATTTCGCACGACCGTTGGTTCCTCGATAGAAT
CGCGACTCACATTCTAGATTACCGCGATGAAGGTAAGGTGAACTTCTACGAAGGTAACTACACCGAATACTCAACTTGGT
TGAAAGACACCATGGGTACCGATGTGGTTGAGCCGCACCGCTTAAAGTACAAGCGTATGGTTAAGTAA

Upstream 100 bases:

>100_bases
CTCGTAAATAAACAGCTCGAATTCAGATTTAAGTTCTGCATCGAATCGAGTAGAATTAGCGCCATTCAACGTAGAAAAAA
TACAATCGAAGAGAAATAAC

Downstream 100 bases:

>100_bases
CTTTTACCACTCGATTTGAAAGGAGGCCTCGGCCTCCTTTTTTATTGCACTAATTTATTGTACTGATTTGTTGTACAAGC
CCTCCCCAAGAATTCCCACC

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MAQFVYSMLRVGKIVPPKKQILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGLDTEIEGEARPMQDLKIGYLPQEPKL
DPNQTVREAVEEAVAEAKNALVRLDEVYALYAEPDADFDALAKEQGQLEAIIQSQDAHNLEMVLDRAANALRLPDWDEKI
EVLSGGERRRVAICRLLLEKPDMLLLDEPTNHLDAESVAWLERFLQDYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
EGNYSSWLEQKDARLQQESSTESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTNDYQKRNETNELFIPPGPRLG
DKVIEINNLTKSYGDRVLIDDLTFSVPKGAIVGIIGANGAGKSTLFKMISGAEQPDSGTVELGESVQIASVEQFRDSMND
KNTVWQEISDGQDIMRINNTEIPSRAYVGRFNFRGGDQQKIIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETL
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYSTWLKDTMGTDVVEPHRLKYKRMVK

Sequences:

>Translated_555_residues
MAQFVYSMLRVGKIVPPKKQILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGLDTEIEGEARPMQDLKIGYLPQEPKL
DPNQTVREAVEEAVAEAKNALVRLDEVYALYAEPDADFDALAKEQGQLEAIIQSQDAHNLEMVLDRAANALRLPDWDEKI
EVLSGGERRRVAICRLLLEKPDMLLLDEPTNHLDAESVAWLERFLQDYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
EGNYSSWLEQKDARLQQESSTESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTNDYQKRNETNELFIPPGPRLG
DKVIEINNLTKSYGDRVLIDDLTFSVPKGAIVGIIGANGAGKSTLFKMISGAEQPDSGTVELGESVQIASVEQFRDSMND
KNTVWQEISDGQDIMRINNTEIPSRAYVGRFNFRGGDQQKIIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETL
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYSTWLKDTMGTDVVEPHRLKYKRMVK
>Mature_554_residues
AQFVYSMLRVGKIVPPKKQILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGLDTEIEGEARPMQDLKIGYLPQEPKLD
PNQTVREAVEEAVAEAKNALVRLDEVYALYAEPDADFDALAKEQGQLEAIIQSQDAHNLEMVLDRAANALRLPDWDEKIE
VLSGGERRRVAICRLLLEKPDMLLLDEPTNHLDAESVAWLERFLQDYSGTVVAITHDRYFLDNAAGWILELDRGEGIPWE
GNYSSWLEQKDARLQQESSTESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTNDYQKRNETNELFIPPGPRLGD
KVIEINNLTKSYGDRVLIDDLTFSVPKGAIVGIIGANGAGKSTLFKMISGAEQPDSGTVELGESVQIASVEQFRDSMNDK
NTVWQEISDGQDIMRINNTEIPSRAYVGRFNFRGGDQQKIIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETLR
ALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYSTWLKDTMGTDVVEPHRLKYKRMVK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI27881506, Length=517, Percent_Identity=28.0464216634429, Blast_Score=176, Evalue=7e-44,
Organism=Homo sapiens, GI10947137, Length=544, Percent_Identity=27.3897058823529, Blast_Score=175, Evalue=8e-44,
Organism=Homo sapiens, GI148612853, Length=521, Percent_Identity=28.0230326295585, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI10947135, Length=564, Percent_Identity=27.3049645390071, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI69354671, Length=564, Percent_Identity=27.3049645390071, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI31657092, Length=202, Percent_Identity=27.2277227722772, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI9955968, Length=241, Percent_Identity=26.9709543568465, Blast_Score=69, Evalue=9e-12,
Organism=Homo sapiens, GI9955966, Length=241, Percent_Identity=26.9709543568465, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI45243524, Length=241, Percent_Identity=26.9709543568465, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=79.8198198198198, Blast_Score=940, Evalue=0.0,
Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=33.9147286821705, Blast_Score=273, Evalue=3e-74,
Organism=Escherichia coli, GI1789751, Length=545, Percent_Identity=31.9266055045872, Blast_Score=238, Evalue=1e-63,
Organism=Escherichia coli, GI1787041, Length=521, Percent_Identity=30.1343570057582, Blast_Score=214, Evalue=2e-56,
Organism=Escherichia coli, GI87081782, Length=573, Percent_Identity=25.3054101221641, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI48994943, Length=476, Percent_Identity=25.4201680672269, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI87081791, Length=165, Percent_Identity=36.3636363636364, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=26.4248704663212, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1788761, Length=231, Percent_Identity=31.6017316017316, Blast_Score=79, Evalue=8e-16,
Organism=Escherichia coli, GI1790190, Length=515, Percent_Identity=21.3592233009709, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1788225, Length=225, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1790739, Length=167, Percent_Identity=35.3293413173653, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87081834, Length=263, Percent_Identity=30.4182509505703, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786398, Length=208, Percent_Identity=27.8846153846154, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1786975, Length=403, Percent_Identity=24.0694789081886, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1786563, Length=188, Percent_Identity=26.5957446808511, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1788450, Length=220, Percent_Identity=27.7272727272727, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787164, Length=238, Percent_Identity=26.0504201680672, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1786345, Length=178, Percent_Identity=27.5280898876405, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1790467, Length=220, Percent_Identity=30.9090909090909, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1788165, Length=188, Percent_Identity=28.7234042553192, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1787758, Length=189, Percent_Identity=30.6878306878307, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787089, Length=219, Percent_Identity=24.6575342465753, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1788472, Length=226, Percent_Identity=25.2212389380531, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786698, Length=164, Percent_Identity=31.7073170731707, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1788897, Length=162, Percent_Identity=28.3950617283951, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1789962, Length=222, Percent_Identity=27.027027027027, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=545, Percent_Identity=26.9724770642202, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17553372, Length=525, Percent_Identity=28.952380952381, Blast_Score=171, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI17555318, Length=544, Percent_Identity=25.3676470588235, Blast_Score=170, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17542146, Length=208, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17510237, Length=210, Percent_Identity=28.0952380952381, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=248, Percent_Identity=27.4193548387097, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=248, Percent_Identity=27.4193548387097, Blast_Score=68, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=261, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=248, Percent_Identity=27.4193548387097, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=270, Percent_Identity=27.037037037037, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=555, Percent_Identity=27.3873873873874, Blast_Score=180, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6320874, Length=515, Percent_Identity=28.9320388349515, Blast_Score=180, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6324314, Length=377, Percent_Identity=26.2599469496021, Blast_Score=107, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6323278, Length=388, Percent_Identity=25.5154639175258, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6325030, Length=384, Percent_Identity=25.78125, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6320266, Length=394, Percent_Identity=23.6040609137056, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24666836, Length=512, Percent_Identity=30.2734375, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24642252, Length=539, Percent_Identity=28.5714285714286, Blast_Score=189, Evalue=6e-48,
Organism=Drosophila melanogaster, GI18859989, Length=539, Percent_Identity=28.5714285714286, Blast_Score=189, Evalue=6e-48,
Organism=Drosophila melanogaster, GI24641342, Length=542, Percent_Identity=28.0442804428044, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24648314, Length=165, Percent_Identity=30.3030303030303, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24666092, Length=202, Percent_Identity=27.2277227722772, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022374
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62344; Mature: 62213

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQFVYSMLRVGKIVPPKKQILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGLDTEIE
CHHHHHHHHHHCCCCCCHHHHHHHCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARPMQDLKIGYLPQEPKLDPNQTVREAVEEAVAEAKNALVRLDEVYALYAEPDADFDA
CCCCCHHHCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHEEEEECCCCCHHH
LAKEQGQLEAIIQSQDAHNLEMVLDRAANALRLPDWDEKIEVLSGGERRRVAICRLLLEK
HHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLERFLQDYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCEEEEEECCCCCCC
EGNYSSWLEQKDARLQQESSTESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
DYQKRNETNELFIPPGPRLGDKVIEINNLTKSYGDRVLIDDLTFSVPKGAIVGIIGANGA
HHHHCCCCCEEEECCCCCCCCEEEEECHHHHHHCCEEEEECCEECCCCCCEEEEEECCCC
GKSTLFKMISGAEQPDSGTVELGESVQIASVEQFRDSMNDKNTVWQEISDGQDIMRINNT
CHHHHHHHHHCCCCCCCCCEECCCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCC
EIPSRAYVGRFNFRGGDQQKIIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETL
CCCCCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYSTWLKDTMGT
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCC
DVVEPHRLKYKRMVK
CCCCHHHHHHHHHCC
>Mature Secondary Structure 
AQFVYSMLRVGKIVPPKKQILKNISLSFFPGAKIGVLGLNGSGKSTLLRIMAGLDTEIE
HHHHHHHHHHCCCCCCHHHHHHHCCCEECCCCEEEEEEECCCCHHHHHHHHHCCCCCCC
GEARPMQDLKIGYLPQEPKLDPNQTVREAVEEAVAEAKNALVRLDEVYALYAEPDADFDA
CCCCCHHHCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHEEEEECCCCCHHH
LAKEQGQLEAIIQSQDAHNLEMVLDRAANALRLPDWDEKIEVLSGGERRRVAICRLLLEK
HHHHCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCC
PDMLLLDEPTNHLDAESVAWLERFLQDYSGTVVAITHDRYFLDNAAGWILELDRGEGIPW
CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCEEEEEECCCCCCC
EGNYSSWLEQKDARLQQESSTESARQKTIAKELEWVRQGAKGRQSKGKARMARFEELNTN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
DYQKRNETNELFIPPGPRLGDKVIEINNLTKSYGDRVLIDDLTFSVPKGAIVGIIGANGA
HHHHCCCCCEEEECCCCCCCCEEEEECHHHHHHCCEEEEECCEECCCCCCEEEEEECCCC
GKSTLFKMISGAEQPDSGTVELGESVQIASVEQFRDSMNDKNTVWQEISDGQDIMRINNT
CHHHHHHHHHCCCCCCCCCEECCCCEEEHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCC
EIPSRAYVGRFNFRGGDQQKIIGTLSGGERNRVHLAKLLQAGGNVLLLDEPTNDLDVETL
CCCCCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH
RALEEALLEFPGCAMVISHDRWFLDRIATHILDYRDEGKVNFYEGNYTEYSTWLKDTMGT
HHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCC
DVVEPHRLKYKRMVK
CCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]