| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167623134
Identifier: 167623134
GI number: 167623134
Start: 1458649
End: 1459719
Strand: Reverse
Name: 167623134
Synonym: Shal_1200
Alternate gene names: NA
Gene position: 1459719-1458649 (Counterclockwise)
Preceding gene: 167623135
Following gene: 167623133
Centisome position: 27.93
GC content: 47.99
Gene sequence:
>1071_bases ATGTTTAAAACCCTACTCTATGCCACAGCGCTGCTAAGCTTACCGGCGCAGCTTAGCGCTCACGAGCCATTAGCTTATCA GTTTGATGGGCCATACCTTATTCAAGAACAGCAGAATCAAGCACCGACCGCATTCTGGATCTGTAATGCGAACCTTAAAA CCACTAAGACCAAGCAACAGGTTGTTAAACGACCAGAAAACTGTGGCCAGCTGCCCCAGCCTATCCTCAGTGATGCAATA AAGCAGGTGATGCCTGACAGCTATGATGGCGTCAAAAAGGTCGTCGCCCTTAGCGATGTGCACGGCCAGTACGATGTATT AATCACCTTGCTTAAGAATCAAAAAATCATCGATGCCGATAATAACTGGGCCTTTGGCGCTGGCCACATGGTGATGACAG GGGATATGTTTGACCGCGGCGATCAGATAAACGAAGTGCTGTGGTTTATGTATCAGCTAGACCGTCAAGCCAAAGCCGCC GGCGGCATGTTACATCTACTAATGGGTAATCATGAGCAGATGGTGCTAGGAGGCGACTTAAGATATGTGCATGAGCGTTA TGACTTAGCCAGCGAACTACTACACAGAAGCAACGACGCCCTCTATGGCGAAGACACCGAAATTGGCCAGTGGCTGAGAA GCAAGAACACCTTAGTCAAGATTAATGACGTGCTGTATATGCACGGCGGCATCAGCAATGAATGGCTTGAGCGTAAGTTA ACCATCGAGCAGGCAAATCAGTTATTTCGCGCTAACATCGGCAGGCCGAAGGCGGAACTCAAACAAGATGAGCTATTAAG CTTTCTGTTTTATGGCAATGGCCCAACCTGGTATCGCGGCTACTTTTCAGAGGCTTTTACTGAGGCTGAGCTTGATAAAA TACTGGCCTATTTTGACGTCAAGCATATAACCGTGGGTCACACCTCACAAAAACAGGTACTTGGGCTATTTAATAATAAA ATCATCGCCATCGACAGCAGCATTAAGCGCGGTGAACAGGGAGAGCTGTTGCTTATCCAGCACAATGAGTTAACTCGCGG CCTCTATGATGGTTCTCGCCAACCGCTCTAG
Upstream 100 bases:
>100_bases AACGTAGTCGCTACCTGATTGGTTGGTAATAACAAGCATTCGTTCAAAAATGAAACAGGTATAAACCAAAATAAAACTAA CAACAAAGAAGTATCAATAT
Downstream 100 bases:
>100_bases TTCTATCCCGCTATAGCGGCTGATGCTATCCAAATAAAGCCAACAATTTTTGTTGGCTTTATTTTTACAGGCTGACTTTA GCCGATAAATAGAGCTTGCT
Product: metallophosphoesterase
Products: NA
Alternate protein names: Ser/Thr Protein Phosphatase Family Protein; Serine/Threonine Protein Phosphatase; Phosphatase; Protein-Tyrosine-Phosphatase; Calcineurin-Like Phosphoesterase Family Protein; Psychrophilic Phosphatase I
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MFKTLLYATALLSLPAQLSAHEPLAYQFDGPYLIQEQQNQAPTAFWICNANLKTTKTKQQVVKRPENCGQLPQPILSDAI KQVMPDSYDGVKKVVALSDVHGQYDVLITLLKNQKIIDADNNWAFGAGHMVMTGDMFDRGDQINEVLWFMYQLDRQAKAA GGMLHLLMGNHEQMVLGGDLRYVHERYDLASELLHRSNDALYGEDTEIGQWLRSKNTLVKINDVLYMHGGISNEWLERKL TIEQANQLFRANIGRPKAELKQDELLSFLFYGNGPTWYRGYFSEAFTEAELDKILAYFDVKHITVGHTSQKQVLGLFNNK IIAIDSSIKRGEQGELLLIQHNELTRGLYDGSRQPL
Sequences:
>Translated_356_residues MFKTLLYATALLSLPAQLSAHEPLAYQFDGPYLIQEQQNQAPTAFWICNANLKTTKTKQQVVKRPENCGQLPQPILSDAI KQVMPDSYDGVKKVVALSDVHGQYDVLITLLKNQKIIDADNNWAFGAGHMVMTGDMFDRGDQINEVLWFMYQLDRQAKAA GGMLHLLMGNHEQMVLGGDLRYVHERYDLASELLHRSNDALYGEDTEIGQWLRSKNTLVKINDVLYMHGGISNEWLERKL TIEQANQLFRANIGRPKAELKQDELLSFLFYGNGPTWYRGYFSEAFTEAELDKILAYFDVKHITVGHTSQKQVLGLFNNK IIAIDSSIKRGEQGELLLIQHNELTRGLYDGSRQPL >Mature_356_residues MFKTLLYATALLSLPAQLSAHEPLAYQFDGPYLIQEQQNQAPTAFWICNANLKTTKTKQQVVKRPENCGQLPQPILSDAI KQVMPDSYDGVKKVVALSDVHGQYDVLITLLKNQKIIDADNNWAFGAGHMVMTGDMFDRGDQINEVLWFMYQLDRQAKAA GGMLHLLMGNHEQMVLGGDLRYVHERYDLASELLHRSNDALYGEDTEIGQWLRSKNTLVKINDVLYMHGGISNEWLERKL TIEQANQLFRANIGRPKAELKQDELLSFLFYGNGPTWYRGYFSEAFTEAELDKILAYFDVKHITVGHTSQKQVLGLFNNK IIAIDSSIKRGEQGELLLIQHNELTRGLYDGSRQPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40479; Mature: 40479
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKTLLYATALLSLPAQLSAHEPLAYQFDGPYLIQEQQNQAPTAFWICNANLKTTKTKQQ CHHHHHHHHHHHHCCHHCCCCCCEEEECCCCEEEECCCCCCCEEEEEEECCCCCCHHHHH VVKRPENCGQLPQPILSDAIKQVMPDSYDGVKKVVALSDVHGQYDVLITLLKNQKIIDAD HHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHEEEECCCEEEECC NNWAFGAGHMVMTGDMFDRGDQINEVLWFMYQLDRQAKAAGGMLHLLMGNHEQMVLGGDL CCEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCH RYVHERYDLASELLHRSNDALYGEDTEIGQWLRSKNTLVKINDVLYMHGGISNEWLERKL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHH TIEQANQLFRANIGRPKAELKQDELLSFLFYGNGPTWYRGYFSEAFTEAELDKILAYFDV HHHHHHHHHHHCCCCCHHHHCHHHHEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCE KHITVGHTSQKQVLGLFNNKIIAIDSSIKRGEQGELLLIQHNELTRGLYDGSRQPL EEEEECCCCHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHCCCCCCC >Mature Secondary Structure MFKTLLYATALLSLPAQLSAHEPLAYQFDGPYLIQEQQNQAPTAFWICNANLKTTKTKQQ CHHHHHHHHHHHHCCHHCCCCCCEEEECCCCEEEECCCCCCCEEEEEEECCCCCCHHHHH VVKRPENCGQLPQPILSDAIKQVMPDSYDGVKKVVALSDVHGQYDVLITLLKNQKIIDAD HHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHEEEECCCEEEECC NNWAFGAGHMVMTGDMFDRGDQINEVLWFMYQLDRQAKAAGGMLHLLMGNHEQMVLGGDL CCEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCH RYVHERYDLASELLHRSNDALYGEDTEIGQWLRSKNTLVKINDVLYMHGGISNEWLERKL HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEEEECCCCHHHHHHHH TIEQANQLFRANIGRPKAELKQDELLSFLFYGNGPTWYRGYFSEAFTEAELDKILAYFDV HHHHHHHHHHHCCCCCHHHHCHHHHEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCE KHITVGHTSQKQVLGLFNNKIIAIDSSIKRGEQGELLLIQHNELTRGLYDGSRQPL EEEEECCCCHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA